RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 SRCIN1Q9C0H9 1055 aa8.87□□□□□ -0.99
CLIP1-205ENST00000514271 ARFGEF1Q9Y6D6 1849 aa8.87□□□□□ -0.99
CLIP1-205ENST00000514271 NBPF26B4DH59 902 aa8.86□□□□□ -0.99
CLIP1-205ENST00000514271 ERC2O15083 957 aa8.86□□□□□ -0.99
CLIP1-205ENST00000514271 ALDH1L1O75891 902 aa8.86□□□□□ -0.99
CLIP1-205ENST00000514271 CANXP27824 592 aaKnown RBP8.86□□□□□ -0.99
CLIP1-205ENST00000514271 NBPF10Q6P3W6 841 aaKnown RBP8.86□□□□□ -0.99
CLIP1-205ENST00000514271 NBPF15Q8N660 670 aa8.86□□□□□ -0.99
CLIP1-205ENST00000514271 PYCARDQ9ULZ3 195 aa8.86□□□□□ -0.99
CLIP1-205ENST00000514271 KIAA1551Q9HCM1 1747 aa8.86□□□□□ -0.99
CLIP1-205ENST00000514271 ST5P78524 1137 aa8.86□□□□□ -0.99
CLIP1-205ENST00000514271 KSR2Q6VAB6 950 aa8.86□□□□□ -0.99
CLIP1-205ENST00000514271 FEZ1Q99689 392 aa8.86□□□□□ -0.99
CLIP1-205ENST00000514271 AKAP11Q9UKA4 1901 aa8.86□□□□□ -0.99
CLIP1-205ENST00000514271 MYH13Q9UKX3 1938 aa8.86□□□□□ -0.99
CLIP1-205ENST00000514271 A1BGP04217 495 aa8.86□□□□□ -0.99
CLIP1-205ENST00000514271 SARM1Q6SZW1 724 aa8.86□□□□□ -0.99
CLIP1-205ENST00000514271 TMC4Q7Z404 712 aa8.86□□□□□ -0.99
CLIP1-205ENST00000514271 USP48Q86UV5 1035 aa8.86□□□□□ -0.99
CLIP1-205ENST00000514271 CCDC191Q8NCU4 936 aa8.86□□□□□ -0.99
CLIP1-205ENST00000514271 SETDB2Q96T68 719 aa8.86□□□□□ -0.99
CLIP1-205ENST00000514271 MIS18AQ9NYP9 233 aa8.86□□□□□ -0.99
CLIP1-205ENST00000514271 MED23Q9ULK4 1368 aa8.86□□□□□ -0.99
CLIP1-205ENST00000514271 PRPF40AO75400 957 aaKnown RBP8.85□□□□□ -0.99
CLIP1-205ENST00000514271 TCIRG1Q13488 830 aa8.85□□□□□ -0.99
CLIP1-205ENST00000514271 ANKRD13DQ6ZTN6 518 aa8.85□□□□□ -0.99
CLIP1-205ENST00000514271 RUFY3Q7L099 469 aa8.85□□□□□ -0.99
CLIP1-205ENST00000514271 ZNF34Q8IZ26 560 aa8.85□□□□□ -0.99
CLIP1-205ENST00000514271 CDHR2Q9BYE9 1310 aa8.85□□□□□ -0.99
CLIP1-205ENST00000514271 MYH3P11055 1940 aa8.85□□□□□ -0.99
CLIP1-205ENST00000514271 PDE6BP35913 854 aa8.85□□□□□ -0.99
CLIP1-205ENST00000514271 KIAA2012Q0VF49 1180 aa8.85□□□□□ -0.99
CLIP1-205ENST00000514271 MTX1Q13505 466 aa8.85□□□□□ -0.99
CLIP1-205ENST00000514271 TSGA10IPQ3SY00 556 aa8.85□□□□□ -0.99
CLIP1-205ENST00000514271 TSPY26PQ9H489 355 aa8.85□□□□□ -0.99
CLIP1-205ENST00000514271 ZNF446Q9NWS9 450 aa8.85□□□□□ -0.99
CLIP1-205ENST00000514271 CHPF2Q9P2E5 772 aa8.85□□□□□ -0.99
CLIP1-205ENST00000514271 UTYO14607 1347 aa8.85□□□□□ -0.99
CLIP1-205ENST00000514271 BRCA1P38398 1863 aaKnown RBP8.85□□□□□ -0.99
CLIP1-205ENST00000514271 TPTE2Q6XPS3 522 aa8.85□□□□□ -0.99
CLIP1-205ENST00000514271 SSH3Q8TE77 659 aa8.85□□□□□ -0.99
CLIP1-205ENST00000514271 ISCA1Q9BUE6 129 aa8.85□□□□□ -0.99
CLIP1-205ENST00000514271 METTL22Q9BUU2 404 aaPredicted RBP8.85□□□□□ -0.99
CLIP1-205ENST00000514271 FANCGO15287 622 aa8.84□□□□□ -0.99
CLIP1-205ENST00000514271 EIF2S2P20042 333 aaKnown RBP8.84□□□□□ -0.99
CLIP1-205ENST00000514271 SLC10A5Q5PT55 438 aa8.84□□□□□ -0.99
CLIP1-205ENST00000514271 SOGA3Q5TF21 947 aa8.84□□□□□ -0.99
CLIP1-205ENST00000514271 RTL9Q8NET4 1388 aa8.84□□□□□ -0.99
CLIP1-205ENST00000514271 ADD1P35611 737 aaKnown RBP8.84□□□□□ -0.99
CLIP1-205ENST00000514271 KCNJ6P48051 423 aa8.84□□□□□ -1
CLIP1-205ENST00000514271 CCT4P50991 539 aaKnown RBP8.84□□□□□ -1
CLIP1-205ENST00000514271 COL9A3Q14050 684 aaPredicted RBP8.84□□□□□ -1
CLIP1-205ENST00000514271 CCDC183Q5T5S1 534 aa8.84□□□□□ -1
CLIP1-205ENST00000514271 USPL1Q5W0Q7 1092 aa8.84□□□□□ -1
CLIP1-205ENST00000514271 XAGE3Q8WTP9 111 aa8.84□□□□□ -1
CLIP1-205ENST00000514271 MEIS3Q99687 375 aa8.84□□□□□ -1
CLIP1-205ENST00000514271 TM6SF1Q9BZW5 370 aa8.84□□□□□ -1
CLIP1-205ENST00000514271 L2HGDHQ9H9P8 463 aa8.84□□□□□ -1
CLIP1-205ENST00000514271 POLRMTO00411 1230 aaKnown RBP8.83□□□□□ -1
CLIP1-205ENST00000514271 H2AFXP16104 143 aaPredicted RBP8.83□□□□□ -1
CLIP1-205ENST00000514271 PTGER2P43116 358 aa8.83□□□□□ -1
CLIP1-205ENST00000514271 GABPB1Q06547 395 aaPredicted RBP8.83□□□□□ -1
CLIP1-205ENST00000514271 FLIIQ13045 1269 aa8.83□□□□□ -1
CLIP1-205ENST00000514271 COPS6Q7L5N1 327 aa8.83□□□□□ -1
CLIP1-205ENST00000514271 LINS1Q8NG48 757 aa8.83□□□□□ -1
CLIP1-205ENST00000514271 TDRD7Q8NHU6 1098 aaKnown RBP8.83□□□□□ -1
CLIP1-205ENST00000514271 TRIM44Q96DX7 344 aaPredicted RBP8.83□□□□□ -1
CLIP1-205ENST00000514271 BRIP1Q9BX63 1249 aa8.83□□□□□ -1
CLIP1-205ENST00000514271 FOXD4L1Q9NU39 408 aa8.83□□□□□ -1
CLIP1-205ENST00000514271 MTMR6Q9Y217 621 aa8.83□□□□□ -1
CLIP1-205ENST00000514271 MRVI1Q9Y6F6 885 aa8.83□□□□□ -1
CLIP1-205ENST00000514271 RIC3Q7Z5B4 369 aa8.83□□□□□ -1
CLIP1-205ENST00000514271 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.83□□□□□ -1
CLIP1-205ENST00000514271 ANKRD31Q8N7Z5 1873 aa8.83□□□□□ -1
CLIP1-205ENST00000514271 SALL1Q9NSC2 1324 aa8.83□□□□□ -1
CLIP1-205ENST00000514271 ATAD5Q96QE3 1844 aa8.83□□□□□ -1
CLIP1-205ENST00000514271 KLRG2A4D1S0 409 aaPredicted RBP8.82□□□□□ -1
CLIP1-205ENST00000514271 PHF14O94880 888 aa8.82□□□□□ -1
CLIP1-205ENST00000514271 STYK1Q6J9G0 422 aa8.82□□□□□ -1
CLIP1-205ENST00000514271 DNAAF4Q8WXU2 420 aa8.82□□□□□ -1
CLIP1-205ENST00000514271 UTP14AQ9BVJ6 771 aaKnown RBP8.82□□□□□ -1
CLIP1-205ENST00000514271 LRRC37AA6NMS7 1700 aa8.82□□□□□ -1
CLIP1-205ENST00000514271 APBB1O00213 710 aa8.82□□□□□ -1
CLIP1-205ENST00000514271 SGSM2O43147 1006 aa8.82□□□□□ -1
CLIP1-205ENST00000514271 SLC4A2P04920 1241 aa8.82□□□□□ -1
CLIP1-205ENST00000514271 MSNP26038 577 aaKnown RBP8.82□□□□□ -1
CLIP1-205ENST00000514271 UBE2HP62256 183 aa8.82□□□□□ -1
CLIP1-205ENST00000514271 IQCB1Q15051 598 aa8.82□□□□□ -1
CLIP1-205ENST00000514271 PPP4R3BQ5MIZ7 849 aa8.82□□□□□ -1
CLIP1-205ENST00000514271 PLA2G12BQ9BX93 195 aa8.82□□□□□ -1
CLIP1-205ENST00000514271 PPP1R1BQ9UD71 204 aaPredicted RBP8.82□□□□□ -1
CLIP1-205ENST00000514271 SNX14Q9Y5W7 946 aa8.82□□□□□ -1
CLIP1-205ENST00000514271 RFX7Q2KHR2 1363 aa8.82□□□□□ -1
CLIP1-205ENST00000514271 ZRANB2O95218 330 aaKnown RBP eCLIP8.82□□□□□ -1
CLIP1-205ENST00000514271 LARGE1O95461 756 aa8.82□□□□□ -1
CLIP1-205ENST00000514271 SERPINB2P05120 415 aa8.82□□□□□ -1
CLIP1-205ENST00000514271 PCCAP05165 728 aaPredicted RBP8.82□□□□□ -1
CLIP1-205ENST00000514271 ATP8B2P98198 1209 aa8.82□□□□□ -1
CLIP1-205ENST00000514271 NFIXQ14938 502 aa8.82□□□□□ -1
CLIP1-205ENST00000514271 CNBD1Q8NA66 436 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms