RNA–Protein interactions for RNA: ENST00000514133.1

SGCB-203, Transcript of sarcoglycan beta, humanhuman

TSL 5

Gene SGCB, Length 599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-203ENST00000514133 XKR5Q6UX68 686 aa5.75□□□□□ -1.49
SGCB-203ENST00000514133 ZSWIM4Q9H7M6 989 aa5.75□□□□□ -1.49
SGCB-203ENST00000514133 ELP3Q9H9T3 547 aa5.75□□□□□ -1.49
SGCB-203ENST00000514133 TMEM63CQ9P1W3 806 aa5.75□□□□□ -1.49
SGCB-203ENST00000514133 DMGDHQ9UI17 866 aaKnown RBP5.75□□□□□ -1.49
SGCB-203ENST00000514133 TMA7Q9Y2S6 64 aaKnown RBP5.75□□□□□ -1.49
SGCB-203ENST00000514133 DCDC2BA2VCK2 349 aa5.74□□□□□ -1.49
SGCB-203ENST00000514133 ANKRD62A6NC57 917 aa5.74□□□□□ -1.49
SGCB-203ENST00000514133 STK10O94804 968 aaKnown RBP5.74□□□□□ -1.49
SGCB-203ENST00000514133 AMPD1P23109 780 aa5.74□□□□□ -1.49
SGCB-203ENST00000514133 INPP5BP32019 993 aa5.74□□□□□ -1.49
SGCB-203ENST00000514133 RBL2Q08999 1139 aa5.74□□□□□ -1.49
SGCB-203ENST00000514133 PAK2Q13177 524 aa5.74□□□□□ -1.49
SGCB-203ENST00000514133 TRIP4Q15650 581 aaPredicted RBP5.74□□□□□ -1.49
SGCB-203ENST00000514133 BTLAQ7Z6A9 289 aa5.74□□□□□ -1.49
SGCB-203ENST00000514133 MCF2L2Q86YR7 1114 aa5.74□□□□□ -1.49
SGCB-203ENST00000514133 BTBD6Q96KE9 485 aa5.74□□□□□ -1.49
SGCB-203ENST00000514133 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.74□□□□□ -1.49
SGCB-203ENST00000514133 HIRIP3Q9BW71 556 aaPredicted RBP5.74□□□□□ -1.49
SGCB-203ENST00000514133 BCO2Q9BYV7 579 aa5.74□□□□□ -1.49
SGCB-203ENST00000514133 CNTNAP5Q8WYK1 1306 aa5.74□□□□□ -1.49
SGCB-203ENST00000514133 ELOA3CA0A087WX78 387 aaPredicted RBP5.73□□□□□ -1.49
SGCB-203ENST00000514133 TLDC2A0PJX2 215 aa5.73□□□□□ -1.49
SGCB-203ENST00000514133 SPDYE3A6NKU9 549 aa5.73□□□□□ -1.49
SGCB-203ENST00000514133 ELOA3DA6NLF2 546 aaPredicted RBP5.73□□□□□ -1.49
SGCB-203ENST00000514133 ADARB2-AS1A8MUL3 147 aa5.73□□□□□ -1.49
SGCB-203ENST00000514133 ST13P50502 369 aaKnown RBP5.73□□□□□ -1.49
SGCB-203ENST00000514133 ELOA3BQ3SY89 546 aa5.73□□□□□ -1.49
SGCB-203ENST00000514133 SOGA3Q5TF21 947 aa5.73□□□□□ -1.49
SGCB-203ENST00000514133 LRRC69Q6ZNQ3 347 aa5.73□□□□□ -1.49
SGCB-203ENST00000514133 ELOA3Q8NG57 546 aa5.73□□□□□ -1.49
SGCB-203ENST00000514133 TNFRSF25Q93038 417 aa5.73□□□□□ -1.49
SGCB-203ENST00000514133 DCAF5Q96JK2 942 aa5.73□□□□□ -1.49
SGCB-203ENST00000514133 SRCIN1Q9C0H9 1055 aa5.73□□□□□ -1.49
SGCB-203ENST00000514133 COPRSQ9NQ92 184 aa5.73□□□□□ -1.49
SGCB-203ENST00000514133 KCNMB2Q9Y691 235 aa5.73□□□□□ -1.49
SGCB-203ENST00000514133 NEURL1BA8MQ27 555 aa5.72□□□□□ -1.49
SGCB-203ENST00000514133 SHISA8B8ZZ34 492 aa5.72□□□□□ -1.49
SGCB-203ENST00000514133 EREGO14944 169 aa5.72□□□□□ -1.49
SGCB-203ENST00000514133 EPB42P16452 691 aa5.72□□□□□ -1.49
SGCB-203ENST00000514133 ATF4P18848 351 aaPredicted RBP5.72□□□□□ -1.49
SGCB-203ENST00000514133 CD33P20138 364 aa5.72□□□□□ -1.49
SGCB-203ENST00000514133 C1orf127Q8N9H9 656 aa5.72□□□□□ -1.49
SGCB-203ENST00000514133 GPRASP2Q96D09 838 aa5.72□□□□□ -1.49
SGCB-203ENST00000514133 PIF1Q9H611 641 aa5.72□□□□□ -1.49
SGCB-203ENST00000514133 RRAGCQ9HB90 399 aa5.72□□□□□ -1.49
SGCB-203ENST00000514133 KCNH4Q9UQ05 1017 aa5.72□□□□□ -1.49
SGCB-203ENST00000514133 XYLBO75191 536 aa5.71□□□□□ -1.5
SGCB-203ENST00000514133 FGRP09769 529 aa5.71□□□□□ -1.5
SGCB-203ENST00000514133 GJA8P48165 433 aa5.71□□□□□ -1.5
SGCB-203ENST00000514133 DGKGP49619 791 aa5.71□□□□□ -1.5
SGCB-203ENST00000514133 PCSK7Q16549 785 aa5.71□□□□□ -1.5
SGCB-203ENST00000514133 LINC00114Q6XXX2 140 aa5.71□□□□□ -1.5
SGCB-203ENST00000514133 ZNF662Q6ZS27 426 aa5.71□□□□□ -1.5
SGCB-203ENST00000514133 C1orf229Q6ZS94 237 aaPredicted RBP5.71□□□□□ -1.5
SGCB-203ENST00000514133 GALNT12Q8IXK2 581 aa5.71□□□□□ -1.5
SGCB-203ENST00000514133 MDFIQ99750 246 aa5.71□□□□□ -1.5
SGCB-203ENST00000514133 OSBPL2Q9H1P3 480 aa5.71□□□□□ -1.5
SGCB-203ENST00000514133 BRD7Q9NPI1 651 aa5.71□□□□□ -1.5
SGCB-203ENST00000514133 PRDM6Q9NQX0 595 aa5.71□□□□□ -1.5
SGCB-203ENST00000514133 KBTBD4Q9NVX7 518 aa5.71□□□□□ -1.5
SGCB-203ENST00000514133 PPP4R2Q9NY27 417 aa5.71□□□□□ -1.5
SGCB-203ENST00000514133 CNTN3Q9P232 1028 aa5.71□□□□□ -1.5
SGCB-203ENST00000514133 TTF2Q9UNY4 1162 aaKnown RBP5.71□□□□□ -1.5
SGCB-203ENST00000514133 F6X3S4 739 aa5.7□□□□□ -1.5
SGCB-203ENST00000514133 MSTNO14793 375 aa5.7□□□□□ -1.5
SGCB-203ENST00000514133 CES1P23141 567 aa5.7□□□□□ -1.5
SGCB-203ENST00000514133 GSTT1P30711 240 aa5.7□□□□□ -1.5
SGCB-203ENST00000514133 GRM2Q14416 872 aa5.7□□□□□ -1.5
SGCB-203ENST00000514133 BMS1Q14692 1282 aaKnown RBP5.7□□□□□ -1.5
SGCB-203ENST00000514133 TTC39BQ5VTQ0 682 aaPredicted RBP5.7□□□□□ -1.5
SGCB-203ENST00000514133 CHSY3Q70JA7 882 aa5.7□□□□□ -1.5
SGCB-203ENST00000514133 ERMP1Q7Z2K6 904 aa5.7□□□□□ -1.5
SGCB-203ENST00000514133 FCHSD1Q86WN1 690 aa5.7□□□□□ -1.5
SGCB-203ENST00000514133 ANKRD13AQ8IZ07 590 aa5.7□□□□□ -1.5
SGCB-203ENST00000514133 PMEPA1Q969W9 287 aa5.7□□□□□ -1.5
SGCB-203ENST00000514133 CEP63Q96MT8 703 aa5.7□□□□□ -1.5
SGCB-203ENST00000514133 SPON2Q9BUD6 331 aa5.7□□□□□ -1.5
SGCB-203ENST00000514133 CHRDQ9H2X0 955 aa5.7□□□□□ -1.5
SGCB-203ENST00000514133 ABI2Q9NYB9 513 aaPredicted RBP5.7□□□□□ -1.5
SGCB-203ENST00000514133 MINDY4BA8MYZ0 360 aa5.69□□□□□ -1.5
SGCB-203ENST00000514133 SSBP05455 408 aaKnown RBP eCLIP5.69□□□□□ -1.5
SGCB-203ENST00000514133 HOXB4P17483 251 aaPredicted RBP5.69□□□□□ -1.5
SGCB-203ENST00000514133 SNRPNP63162 240 aaKnown RBP5.69□□□□□ -1.5
SGCB-203ENST00000514133 TYRO3Q06418 890 aa5.69□□□□□ -1.5
SGCB-203ENST00000514133 SPEM2Q0P670 501 aa5.69□□□□□ -1.5
SGCB-203ENST00000514133 SDE2Q6IQ49 451 aa5.69□□□□□ -1.5
SGCB-203ENST00000514133 SYT9Q86SS6 491 aa5.69□□□□□ -1.5
SGCB-203ENST00000514133 RELL1Q8IUW5 271 aa5.69□□□□□ -1.5
SGCB-203ENST00000514133 EHD4Q9H223 541 aa5.69□□□□□ -1.5
SGCB-203ENST00000514133 SUV39H2Q9H5I1 410 aa5.69□□□□□ -1.5
SGCB-203ENST00000514133 KLF15Q9UIH9 416 aa5.69□□□□□ -1.5
SGCB-203ENST00000514133 GRNP28799 593 aaKnown RBP5.68□□□□□ -1.5
SGCB-203ENST00000514133 FCGRTP55899 365 aa5.68□□□□□ -1.5
SGCB-203ENST00000514133 CCDC85BQ15834 202 aaPredicted RBP5.68□□□□□ -1.5
SGCB-203ENST00000514133 PLA2G4EQ3MJ16 856 aa5.68□□□□□ -1.5
SGCB-203ENST00000514133 NLRP13Q86W25 1043 aa5.68□□□□□ -1.5
SGCB-203ENST00000514133 KIAA0825Q8IV33 1275 aa5.68□□□□□ -1.5
SGCB-203ENST00000514133 CKAP2LQ8IYA6 745 aa5.68□□□□□ -1.5
SGCB-203ENST00000514133 NOC4LQ9BVI4 516 aaKnown RBP5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms