RNA–Protein interactions for RNA: ENST00000513761.5

CLCN3-209, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCN3, Length 6,692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-209ENST00000513761 MAP3K5Q99683 1374 aa8.88□□□□□ -0.99
CLCN3-209ENST00000513761 CEP170Q5SW79 1584 aa8.88□□□□□ -0.99
CLCN3-209ENST00000513761 USO1O60763 962 aaKnown RBP8.88□□□□□ -0.99
CLCN3-209ENST00000513761 MTIF2P46199 727 aaKnown RBP8.88□□□□□ -0.99
CLCN3-209ENST00000513761 NLRP5P59047 1200 aa8.88□□□□□ -0.99
CLCN3-209ENST00000513761 ATP2B2Q01814 1243 aa8.88□□□□□ -0.99
CLCN3-209ENST00000513761 CUL4AQ13619 759 aa8.88□□□□□ -0.99
CLCN3-209ENST00000513761 RRAGBQ5VZM2 374 aa8.88□□□□□ -0.99
CLCN3-209ENST00000513761 KANK3Q6NY19 840 aa8.88□□□□□ -0.99
CLCN3-209ENST00000513761 MRVI1Q9Y6F6 885 aa8.88□□□□□ -0.99
CLCN3-209ENST00000513761 PLA2R1Q13018 1463 aa8.88□□□□□ -0.99
CLCN3-209ENST00000513761 CFAP65Q6ZU64 1925 aaKnown RBP8.88□□□□□ -0.99
CLCN3-209ENST00000513761 LDHAL6AQ6ZMR3 332 aa8.88□□□□□ -0.99
CLCN3-209ENST00000513761 XPO4Q9C0E2 1151 aaKnown RBP8.88□□□□□ -0.99
CLCN3-209ENST00000513761 A0A087WWV3 80 aa8.87□□□□□ -0.99
CLCN3-209ENST00000513761 KIF2CQ99661 725 aa8.87□□□□□ -0.99
CLCN3-209ENST00000513761 RASSF4Q9H2L5 321 aa8.87□□□□□ -0.99
CLCN3-209ENST00000513761 SEPT11Q9NVA2 429 aaKnown RBP8.87□□□□□ -0.99
CLCN3-209ENST00000513761 LRRC8AQ8IWT6 810 aa8.87□□□□□ -0.99
CLCN3-209ENST00000513761 TCEAL9Q9UHQ7 104 aa8.87□□□□□ -0.99
CLCN3-209ENST00000513761 IKQ13123 557 aaPredicted RBP8.87□□□□□ -0.99
CLCN3-209ENST00000513761 HLTFQ14527 1009 aaKnown RBP eCLIP8.87□□□□□ -0.99
CLCN3-209ENST00000513761 MICALL1Q8N3F8 863 aa8.87□□□□□ -0.99
CLCN3-209ENST00000513761 GUCA1BQ9UMX6 200 aa8.87□□□□□ -0.99
CLCN3-209ENST00000513761 SBNO2Q9Y2G9 1366 aa8.87□□□□□ -0.99
CLCN3-209ENST00000513761 CTCFLQ8NI51 663 aaPredicted RBP8.87□□□□□ -0.99
CLCN3-209ENST00000513761 CCDC43Q96MW1 224 aaKnown RBP8.87□□□□□ -0.99
CLCN3-209ENST00000513761 DNAJC21Q5F1R6 531 aaKnown RBP8.87□□□□□ -0.99
CLCN3-209ENST00000513761 SPECC1Q5M775 1068 aa8.87□□□□□ -0.99
CLCN3-209ENST00000513761 MFSD6Q6ZSS7 791 aa8.87□□□□□ -0.99
CLCN3-209ENST00000513761 ANKRD24Q8TF21 1146 aa8.87□□□□□ -0.99
CLCN3-209ENST00000513761 TRIM21P19474 475 aaKnown RBP8.86□□□□□ -0.99
CLCN3-209ENST00000513761 ATP10AO60312 1499 aa8.86□□□□□ -0.99
CLCN3-209ENST00000513761 OAS2P29728 719 aaKnown RBP8.86□□□□□ -0.99
CLCN3-209ENST00000513761 CCDC178Q5BJE1 867 aa8.86□□□□□ -0.99
CLCN3-209ENST00000513761 PRDM11Q9NQV5 511 aa8.86□□□□□ -0.99
CLCN3-209ENST00000513761 DBNDD2Q9BQY9 259 aa8.86□□□□□ -0.99
CLCN3-209ENST00000513761 TTC21AQ8NDW8 1320 aa8.86□□□□□ -0.99
CLCN3-209ENST00000513761 ZNF202O95125 648 aa8.86□□□□□ -0.99
CLCN3-209ENST00000513761 SNRPA1P09661 255 aaKnown RBP8.86□□□□□ -0.99
CLCN3-209ENST00000513761 TIMM10P62072 90 aa8.86□□□□□ -0.99
CLCN3-209ENST00000513761 BRAPQ7Z569 592 aa8.86□□□□□ -0.99
CLCN3-209ENST00000513761 CACTINQ8WUQ7 758 aaKnown RBP8.86□□□□□ -0.99
CLCN3-209ENST00000513761 PDLIM2Q96JY6 352 aa8.86□□□□□ -0.99
CLCN3-209ENST00000513761 TRIM47Q96LD4 638 aa8.86□□□□□ -0.99
CLCN3-209ENST00000513761 CCDC113Q9H0I3 377 aa8.86□□□□□ -0.99
CLCN3-209ENST00000513761 ZDHHC9Q9Y397 364 aa8.86□□□□□ -0.99
CLCN3-209ENST00000513761 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.86□□□□□ -0.99
CLCN3-209ENST00000513761 SSH2Q76I76 1423 aa8.86□□□□□ -0.99
CLCN3-209ENST00000513761 PBRM1Q86U86 1689 aa8.86□□□□□ -0.99
CLCN3-209ENST00000513761 IQCA1Q86XH1 822 aa8.86□□□□□ -0.99
CLCN3-209ENST00000513761 TM6SF1Q9BZW5 370 aa8.86□□□□□ -0.99
CLCN3-209ENST00000513761 LSG1Q9H089 658 aaKnown RBP8.86□□□□□ -0.99
CLCN3-209ENST00000513761 A0A0D9SFI3 127 aa8.86□□□□□ -0.99
CLCN3-209ENST00000513761 RNF113AO15541 343 aaKnown RBP8.86□□□□□ -0.99
CLCN3-209ENST00000513761 AKAP4Q5JQC9 854 aa8.86□□□□□ -0.99
CLCN3-209ENST00000513761 MAATS1Q7Z4T9 603 aa8.86□□□□□ -0.99
CLCN3-209ENST00000513761 NEK11Q8NG66 645 aa8.86□□□□□ -0.99
CLCN3-209ENST00000513761 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.86□□□□□ -0.99
CLCN3-209ENST00000513761 ZSWIM6Q9HCJ5 1215 aa8.86□□□□□ -0.99
CLCN3-209ENST00000513761 ATP2C2O75185 946 aa8.85□□□□□ -0.99
CLCN3-209ENST00000513761 LARGE1O95461 756 aa8.85□□□□□ -0.99
CLCN3-209ENST00000513761 SLC9C2Q5TAH2 1124 aa8.85□□□□□ -0.99
CLCN3-209ENST00000513761 CATIPQ7Z7H3 387 aa8.85□□□□□ -0.99
CLCN3-209ENST00000513761 SSH3Q8TE77 659 aa8.85□□□□□ -0.99
CLCN3-209ENST00000513761 CTAGE1Q96RT6 745 aa8.85□□□□□ -0.99
CLCN3-209ENST00000513761 LGR6Q9HBX8 967 aa8.85□□□□□ -0.99
CLCN3-209ENST00000513761 SLC4A8Q2Y0W8 1093 aa8.85□□□□□ -0.99
CLCN3-209ENST00000513761 TTC31Q49AM3 519 aaPredicted RBP8.85□□□□□ -0.99
CLCN3-209ENST00000513761 ANO1Q5XXA6 986 aa8.85□□□□□ -0.99
CLCN3-209ENST00000513761 HDXQ7Z353 690 aa8.85□□□□□ -0.99
CLCN3-209ENST00000513761 SUCLG2Q96I99 432 aa8.85□□□□□ -0.99
CLCN3-209ENST00000513761 USP28Q96RU2 1077 aa8.85□□□□□ -0.99
CLCN3-209ENST00000513761 IMPACTQ9P2X3 320 aa8.85□□□□□ -0.99
CLCN3-209ENST00000513761 TRMT112Q9UI30 125 aaKnown RBP8.85□□□□□ -0.99
CLCN3-209ENST00000513761 ELP1O95163 1332 aa8.85□□□□□ -0.99
CLCN3-209ENST00000513761 IGHMBP2P38935 993 aaKnown RBP8.85□□□□□ -0.99
CLCN3-209ENST00000513761 USP5P45974 858 aa8.85□□□□□ -0.99
CLCN3-209ENST00000513761 PIP4K2BP78356 416 aa8.85□□□□□ -0.99
CLCN3-209ENST00000513761 WTAPQ15007 396 aa8.85□□□□□ -0.99
CLCN3-209ENST00000513761 CCDC96Q2M329 555 aa8.85□□□□□ -0.99
CLCN3-209ENST00000513761 UTP14CQ5TAP6 766 aaKnown RBP8.85□□□□□ -0.99
CLCN3-209ENST00000513761 ATL3Q6DD88 541 aa8.85□□□□□ -0.99
CLCN3-209ENST00000513761 OSBPL3Q9H4L5 887 aa8.85□□□□□ -0.99
CLCN3-209ENST00000513761 BMP2KQ9NSY1 1161 aaPredicted RBP8.85□□□□□ -0.99
CLCN3-209ENST00000513761 EDC4Q6P2E9 1401 aaKnown RBP8.85□□□□□ -0.99
CLCN3-209ENST00000513761 ANKRD18BA2A2Z9 1011 aa8.85□□□□□ -0.99
CLCN3-209ENST00000513761 CCT6AP40227 531 aaKnown RBP8.85□□□□□ -0.99
CLCN3-209ENST00000513761 RTN1Q16799 776 aa8.85□□□□□ -0.99
CLCN3-209ENST00000513761 KIAA0232Q92628 1395 aa8.85□□□□□ -0.99
CLCN3-209ENST00000513761 CCDC194A0A1B0GVG4 234 aa8.85□□□□□ -0.99
CLCN3-209ENST00000513761 WDHD1O75717 1129 aaPredicted RBP8.85□□□□□ -0.99
CLCN3-209ENST00000513761 CHMP4BP1P59074 171 aa8.85□□□□□ -0.99
CLCN3-209ENST00000513761 ATP2B3Q16720 1220 aa8.85□□□□□ -0.99
CLCN3-209ENST00000513761 NBPF11Q86T75 865 aa8.85□□□□□ -0.99
CLCN3-209ENST00000513761 ALS2CR12Q96Q35 445 aa8.85□□□□□ -0.99
CLCN3-209ENST00000513761 RNF41Q9H4P4 317 aaPredicted RBP8.85□□□□□ -0.99
CLCN3-209ENST00000513761 AKR1B15C9JRZ8 316 aaPredicted RBP8.84□□□□□ -0.99
CLCN3-209ENST00000513761 MTX1Q13505 466 aa8.84□□□□□ -0.99
CLCN3-209ENST00000513761 SYCP1Q15431 976 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms