RNA–Protein interactions for RNA: ENST00000513525.1

CCL28-203, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best) BASIC

Gene CCL28, Length 1,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-203ENST00000513525 ERICH6BQ5W0A0 696 aa12.57□□□□□ -0.4
CCL28-203ENST00000513525 MAP1SQ66K74 1059 aaPredicted RBP12.57□□□□□ -0.4
CCL28-203ENST00000513525 SEC31BQ9NQW1 1179 aa12.57□□□□□ -0.4
CCL28-203ENST00000513525 ADARB2Q9NS39 739 aaKnown RBP12.57□□□□□ -0.4
CCL28-203ENST00000513525 PODXL2Q9NZ53 605 aa12.57□□□□□ -0.4
CCL28-203ENST00000513525 NSFL1CQ9UNZ2 370 aaKnown RBP12.57□□□□□ -0.4
CCL28-203ENST00000513525 GPSM2P81274 684 aa12.57□□□□□ -0.4
CCL28-203ENST00000513525 G2E3Q7L622 706 aa12.57□□□□□ -0.4
CCL28-203ENST00000513525 EYA3Q99504 573 aa12.57□□□□□ -0.4
CCL28-203ENST00000513525 POLLQ9UGP5 575 aa12.57□□□□□ -0.4
CCL28-203ENST00000513525 RTL9Q8NET4 1388 aa12.56□□□□□ -0.4
CCL28-203ENST00000513525 POTEB3A0JP26 581 aa12.56□□□□□ -0.4
CCL28-203ENST00000513525 NEURL1BA8MQ27 555 aa12.56□□□□□ -0.4
CCL28-203ENST00000513525 RAD17O75943 681 aa12.56□□□□□ -0.4
CCL28-203ENST00000513525 GMPSP49915 693 aaPredicted RBP12.56□□□□□ -0.4
CCL28-203ENST00000513525 FLIIQ13045 1269 aa12.56□□□□□ -0.4
CCL28-203ENST00000513525 POTEBQ6S5H4 581 aa12.56□□□□□ -0.4
CCL28-203ENST00000513525 TBC1D16Q8TBP0 767 aa12.56□□□□□ -0.4
CCL28-203ENST00000513525 C6orf229H3BNL8 230 aa12.55□□□□□ -0.4
CCL28-203ENST00000513525 VAMP4O75379 141 aa12.55□□□□□ -0.4
CCL28-203ENST00000513525 CTSWP56202 376 aa12.55□□□□□ -0.4
CCL28-203ENST00000513525 CWF19L2Q2TBE0 894 aaKnown RBP12.55□□□□□ -0.4
CCL28-203ENST00000513525 JARID2Q92833 1246 aaPredicted RBP12.55□□□□□ -0.4
CCL28-203ENST00000513525 MKRN1Q9UHC7 482 aaKnown RBP12.55□□□□□ -0.4
CCL28-203ENST00000513525 ZNF609O15014 1411 aa12.54□□□□□ -0.4
CCL28-203ENST00000513525 RASSF10A6NK89 507 aa12.54□□□□□ -0.4
CCL28-203ENST00000513525 HSPA1AP0DMV8 641 aaKnown RBP12.54□□□□□ -0.4
CCL28-203ENST00000513525 HSPA1BP0DMV9 641 aaKnown RBP12.54□□□□□ -0.4
CCL28-203ENST00000513525 EXOSC9Q06265 439 aaKnown RBP12.54□□□□□ -0.4
CCL28-203ENST00000513525 PDAP1Q13442 181 aaKnown RBP12.54□□□□□ -0.4
CCL28-203ENST00000513525 DPF2Q92785 391 aa12.54□□□□□ -0.4
CCL28-203ENST00000513525 CDC5LQ99459 802 aaKnown RBP12.54□□□□□ -0.4
CCL28-203ENST00000513525 BCL2L13Q9BXK5 485 aa12.54□□□□□ -0.4
CCL28-203ENST00000513525 DBNDD1Q9H9R9 158 aa12.54□□□□□ -0.4
CCL28-203ENST00000513525 PGAP2Q9UHJ9 254 aa12.54□□□□□ -0.4
CCL28-203ENST00000513525 SALL2Q9Y467 1007 aaPredicted RBP12.54□□□□□ -0.4
CCL28-203ENST00000513525 XDHP47989 1333 aa12.53□□□□□ -0.4
CCL28-203ENST00000513525 H7C1W4 665 aa12.53□□□□□ -0.4
CCL28-203ENST00000513525 RIMBP2O15034 1052 aa12.53□□□□□ -0.4
CCL28-203ENST00000513525 ECE2O60344 883 aa12.53□□□□□ -0.4
CCL28-203ENST00000513525 FKBP5Q13451 457 aaPredicted RBP12.53□□□□□ -0.4
CCL28-203ENST00000513525 ANKRD18AQ8IVF6 992 aa12.53□□□□□ -0.4
CCL28-203ENST00000513525 TTLL11Q8NHH1 800 aa12.53□□□□□ -0.4
CCL28-203ENST00000513525 ZC3H15Q8WU90 426 aaKnown RBP12.53□□□□□ -0.4
CCL28-203ENST00000513525 DNAAF4Q8WXU2 420 aa12.53□□□□□ -0.4
CCL28-203ENST00000513525 PLA2G12BQ9BX93 195 aa12.53□□□□□ -0.4
CCL28-203ENST00000513525 PSMD14O00487 310 aa12.52□□□□□ -0.4
CCL28-203ENST00000513525 UFL1O94874 794 aa12.52□□□□□ -0.4
CCL28-203ENST00000513525 RPS12P25398 132 aaKnown RBP12.52□□□□□ -0.4
CCL28-203ENST00000513525 GCKRQ14397 625 aa12.52□□□□□ -0.4
CCL28-203ENST00000513525 ZNF710Q8N1W2 664 aa12.52□□□□□ -0.4
CCL28-203ENST00000513525 LINS1Q8NG48 757 aa12.52□□□□□ -0.4
CCL28-203ENST00000513525 CCDC85AQ96PX6 553 aaPredicted RBP12.52□□□□□ -0.4
CCL28-203ENST00000513525 ZC3H12CQ9C0D7 883 aaKnown RBP12.52□□□□□ -0.4
CCL28-203ENST00000513525 MYH16Q9H6N6 1097 aa12.52□□□□□ -0.4
CCL28-203ENST00000513525 ANKIB1Q9P2G1 1089 aa12.52□□□□□ -0.4
CCL28-203ENST00000513525 CNOT7Q9UIV1 285 aaKnown RBP12.52□□□□□ -0.4
CCL28-203ENST00000513525 GGA1Q9UJY5 639 aa12.52□□□□□ -0.4
CCL28-203ENST00000513525 ECM29Q5VYK3 1845 aa12.52□□□□□ -0.4
CCL28-203ENST00000513525 H7C1D1 291 aa12.52□□□□□ -0.41
CCL28-203ENST00000513525 VEGFBP49765 207 aa12.52□□□□□ -0.41
CCL28-203ENST00000513525 UBE3BQ7Z3V4 1068 aa12.52□□□□□ -0.41
CCL28-203ENST00000513525 GPR101Q96P66 508 aaPredicted RBP12.52□□□□□ -0.41
CCL28-203ENST00000513525 BSDC1Q9NW68 430 aaPredicted RBP12.52□□□□□ -0.41
CCL28-203ENST00000513525 ZNF521Q96K83 1311 aa12.51□□□□□ -0.41
CCL28-203ENST00000513525 ATP2B4P23634 1241 aa12.51□□□□□ -0.41
CCL28-203ENST00000513525 HIRAP54198 1017 aaPredicted RBP12.51□□□□□ -0.41
CCL28-203ENST00000513525 CASP7P55210 303 aa12.51□□□□□ -0.41
CCL28-203ENST00000513525 DOK7Q18PE1 504 aa12.51□□□□□ -0.41
CCL28-203ENST00000513525 DEFB115Q30KQ5 88 aa12.51□□□□□ -0.41
CCL28-203ENST00000513525 MICALL2Q8IY33 904 aa12.51□□□□□ -0.41
CCL28-203ENST00000513525 TRPM4Q8TD43 1214 aa12.51□□□□□ -0.41
CCL28-203ENST00000513525 GREM2Q9H772 168 aa12.51□□□□□ -0.41
CCL28-203ENST00000513525 BOLA1Q9Y3E2 137 aa12.51□□□□□ -0.41
CCL28-203ENST00000513525 MED23Q9ULK4 1368 aa12.51□□□□□ -0.41
CCL28-203ENST00000513525 VIL1P09327 827 aaKnown RBP12.5□□□□□ -0.41
CCL28-203ENST00000513525 FMR1Q06787 632 aaKnown RBP eCLIP12.5□□□□□ -0.41
CCL28-203ENST00000513525 KCNQ5Q9NR82 932 aa12.5□□□□□ -0.41
CCL28-203ENST00000513525 SHTN1A0MZ66 631 aa12.49□□□□□ -0.41
CCL28-203ENST00000513525 TRAF5O00463 557 aa12.49□□□□□ -0.41
CCL28-203ENST00000513525 CSF1RP07333 972 aa12.49□□□□□ -0.41
CCL28-203ENST00000513525 VASPP50552 380 aaPredicted RBP12.49□□□□□ -0.41
CCL28-203ENST00000513525 COL13A1Q5TAT6 717 aaPredicted RBP12.49□□□□□ -0.41
CCL28-203ENST00000513525 CST9Q5W186 159 aa12.49□□□□□ -0.41
CCL28-203ENST00000513525 ABT1Q9ULW3 272 aaKnown RBP12.49□□□□□ -0.41
CCL28-203ENST00000513525 MINPP1Q9UNW1 487 aa12.49□□□□□ -0.41
CCL28-203ENST00000513525 CDC37L1Q7L3B6 337 aa12.48□□□□□ -0.41
CCL28-203ENST00000513525 GLIS2Q9BZE0 524 aaPredicted RBP12.48□□□□□ -0.41
CCL28-203ENST00000513525 TLL2Q9Y6L7 1015 aa12.48□□□□□ -0.41
CCL28-203ENST00000513525 WDR33Q9C0J8 1336 aaKnown RBP12.48□□□□□ -0.41
CCL28-203ENST00000513525 AKAP11Q9UKA4 1901 aa12.48□□□□□ -0.41
CCL28-203ENST00000513525 HOXB1P14653 301 aaPredicted RBP12.47□□□□□ -0.41
CCL28-203ENST00000513525 ITGA6P23229 1130 aa12.47□□□□□ -0.41
CCL28-203ENST00000513525 IGHMBP2P38935 993 aaKnown RBP12.47□□□□□ -0.41
CCL28-203ENST00000513525 CCT4P50991 539 aaKnown RBP12.47□□□□□ -0.41
CCL28-203ENST00000513525 BEND3Q5T5X7 828 aa12.47□□□□□ -0.41
CCL28-203ENST00000513525 SAMD7Q7Z3H4 446 aa12.47□□□□□ -0.41
CCL28-203ENST00000513525 PODNQ7Z5L7 613 aa12.47□□□□□ -0.41
CCL28-203ENST00000513525 AGBL3Q8NEM8 1001 aa12.47□□□□□ -0.41
CCL28-203ENST00000513525 ARAP2Q8WZ64 1704 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms