RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 MINDY4BA8MYZ0 360 aa12.85□□□□□ -0.35
TCOF1-211ENST00000513346 IL13P35225 146 aa12.85□□□□□ -0.35
TCOF1-211ENST00000513346 EHBP1Q8NDI1 1231 aa12.85□□□□□ -0.35
TCOF1-211ENST00000513346 NAPBQ9H115 298 aa12.85□□□□□ -0.35
TCOF1-211ENST00000513346 RHOXF2BP0C7M4 288 aa12.85□□□□□ -0.35
TCOF1-211ENST00000513346 KARSQ15046 597 aaKnown RBP12.85□□□□□ -0.35
TCOF1-211ENST00000513346 RHOXF2Q9BQY4 288 aa12.85□□□□□ -0.35
TCOF1-211ENST00000513346 GCP02774 474 aa12.85□□□□□ -0.35
TCOF1-211ENST00000513346 IL2RBP14784 551 aa12.85□□□□□ -0.35
TCOF1-211ENST00000513346 EZRP15311 586 aaKnown RBP12.85□□□□□ -0.35
TCOF1-211ENST00000513346 TERF2Q15554 542 aa12.85□□□□□ -0.35
TCOF1-211ENST00000513346 RAD50Q92878 1312 aa12.85□□□□□ -0.35
TCOF1-211ENST00000513346 HSPA4P34932 840 aa12.85□□□□□ -0.35
TCOF1-211ENST00000513346 USP5P45974 858 aa12.85□□□□□ -0.35
TCOF1-211ENST00000513346 FAM160A1Q05DH4 1040 aa12.85□□□□□ -0.35
TCOF1-211ENST00000513346 MYCBPQ99417 103 aaPredicted RBP12.85□□□□□ -0.35
TCOF1-211ENST00000513346 KANK3Q6NY19 840 aa12.84□□□□□ -0.35
TCOF1-211ENST00000513346 RPGRQ92834 1020 aaKnown RBP12.84□□□□□ -0.35
TCOF1-211ENST00000513346 GOLGA8BA8MQT2 603 aa12.84□□□□□ -0.35
TCOF1-211ENST00000513346 CPA1P15085 419 aa12.84□□□□□ -0.35
TCOF1-211ENST00000513346 AKAP4Q5JQC9 854 aa12.84□□□□□ -0.35
TCOF1-211ENST00000513346 ATL3Q6DD88 541 aa12.84□□□□□ -0.35
TCOF1-211ENST00000513346 FAM173BQ6P4H8 233 aa12.84□□□□□ -0.35
TCOF1-211ENST00000513346 DZIP1Q86YF9 867 aaKnown RBP12.84□□□□□ -0.35
TCOF1-211ENST00000513346 SIRT1Q96EB6 747 aa12.84□□□□□ -0.35
TCOF1-211ENST00000513346 MYO5CQ9NQX4 1742 aa12.84□□□□□ -0.35
TCOF1-211ENST00000513346 SNX14Q9Y5W7 946 aa12.84□□□□□ -0.35
TCOF1-211ENST00000513346 AFAP1L1Q8TED9 768 aa12.84□□□□□ -0.35
TCOF1-211ENST00000513346 LEO1Q8WVC0 666 aaPredicted RBP12.84□□□□□ -0.35
TCOF1-211ENST00000513346 BAG1Q99933 345 aaPredicted RBP12.84□□□□□ -0.35
TCOF1-211ENST00000513346 NAA15Q9BXJ9 866 aaKnown RBP12.84□□□□□ -0.35
TCOF1-211ENST00000513346 JADE2Q9NQC1 790 aa12.84□□□□□ -0.35
TCOF1-211ENST00000513346 CREB3L3Q68CJ9 461 aa12.84□□□□□ -0.35
TCOF1-211ENST00000513346 FAM76AQ8TAV0 307 aa12.84□□□□□ -0.35
TCOF1-211ENST00000513346 ZNF287Q9HBT7 754 aa12.84□□□□□ -0.35
TCOF1-211ENST00000513346 ZNF569Q5MCW4 686 aa12.83□□□□□ -0.36
TCOF1-211ENST00000513346 CLEC17AQ6ZS10 378 aa12.83□□□□□ -0.36
TCOF1-211ENST00000513346 DYDC1Q8WWB3 177 aa12.83□□□□□ -0.36
TCOF1-211ENST00000513346 LZTFL1Q9NQ48 299 aa12.83□□□□□ -0.36
TCOF1-211ENST00000513346 SPTLC2O15270 562 aa12.83□□□□□ -0.36
TCOF1-211ENST00000513346 HOXC9P31274 260 aa12.83□□□□□ -0.36
TCOF1-211ENST00000513346 HSP90AA4PQ58FG1 418 aa12.83□□□□□ -0.36
TCOF1-211ENST00000513346 COPS6Q7L5N1 327 aa12.83□□□□□ -0.36
TCOF1-211ENST00000513346 LRRC8AQ8IWT6 810 aa12.83□□□□□ -0.36
TCOF1-211ENST00000513346 GPR161Q8N6U8 529 aaKnown RBP12.83□□□□□ -0.36
TCOF1-211ENST00000513346 GOLGA5Q8TBA6 731 aa12.83□□□□□ -0.36
TCOF1-211ENST00000513346 XAGE3Q8WTP9 111 aa12.83□□□□□ -0.36
TCOF1-211ENST00000513346 ZBTB9Q96C00 473 aa12.83□□□□□ -0.36
TCOF1-211ENST00000513346 CDC5LQ99459 802 aaKnown RBP12.83□□□□□ -0.36
TCOF1-211ENST00000513346 TANGO6Q9C0B7 1094 aa12.83□□□□□ -0.36
TCOF1-211ENST00000513346 KDM5CP41229 1560 aa12.83□□□□□ -0.36
TCOF1-211ENST00000513346 PPFIA3O75145 1194 aa12.83□□□□□ -0.36
TCOF1-211ENST00000513346 CHMP4BP1P59074 171 aa12.83□□□□□ -0.36
TCOF1-211ENST00000513346 TUBB2AQ13885 445 aa12.83□□□□□ -0.36
TCOF1-211ENST00000513346 Q6ZUG5 572 aa12.83□□□□□ -0.36
TCOF1-211ENST00000513346 CTAGE1Q96RT6 745 aa12.83□□□□□ -0.36
TCOF1-211ENST00000513346 TUBB2BQ9BVA1 445 aa12.83□□□□□ -0.36
TCOF1-211ENST00000513346 TTC41PQ6P2S7 1318 aa12.83□□□□□ -0.36
TCOF1-211ENST00000513346 TTC37Q6PGP7 1564 aa12.83□□□□□ -0.36
TCOF1-211ENST00000513346 N4BP3O15049 544 aa12.82□□□□□ -0.36
TCOF1-211ENST00000513346 CEP57Q86XR8 500 aa12.82□□□□□ -0.36
TCOF1-211ENST00000513346 MKNK2Q9HBH9 465 aa12.82□□□□□ -0.36
TCOF1-211ENST00000513346 DDX41Q9UJV9 622 aaKnown RBP12.82□□□□□ -0.36
TCOF1-211ENST00000513346 EDC4Q6P2E9 1401 aaKnown RBP12.82□□□□□ -0.36
TCOF1-211ENST00000513346 BTG4Q9NY30 223 aa12.82□□□□□ -0.36
TCOF1-211ENST00000513346 BCCIPQ9P287 314 aaKnown RBP eCLIP12.82□□□□□ -0.36
TCOF1-211ENST00000513346 MAP2K1Q02750 393 aaPredicted RBP12.82□□□□□ -0.36
TCOF1-211ENST00000513346 ATRIPQ8WXE1 791 aa12.82□□□□□ -0.36
TCOF1-211ENST00000513346 EFCC1Q9HA90 598 aa12.82□□□□□ -0.36
TCOF1-211ENST00000513346 C6orf229H3BNL8 230 aa12.82□□□□□ -0.36
TCOF1-211ENST00000513346 WDHD1O75717 1129 aaPredicted RBP12.82□□□□□ -0.36
TCOF1-211ENST00000513346 MYL5Q02045 173 aa12.82□□□□□ -0.36
TCOF1-211ENST00000513346 POTEDQ86YR6 584 aa12.82□□□□□ -0.36
TCOF1-211ENST00000513346 MRFAP1L1Q96HT8 127 aa12.82□□□□□ -0.36
TCOF1-211ENST00000513346 NPHP4O75161 1426 aaPredicted RBP12.81□□□□□ -0.36
TCOF1-211ENST00000513346 RFC4P35249 363 aa12.81□□□□□ -0.36
TCOF1-211ENST00000513346 FKBP15Q5T1M5 1219 aa12.81□□□□□ -0.36
TCOF1-211ENST00000513346 MAATS1Q7Z4T9 603 aa12.81□□□□□ -0.36
TCOF1-211ENST00000513346 ALS2CR12Q96Q35 445 aa12.81□□□□□ -0.36
TCOF1-211ENST00000513346 NLRP1Q9C000 1473 aa12.81□□□□□ -0.36
TCOF1-211ENST00000513346 SNRKQ9NRH2 765 aa12.81□□□□□ -0.36
TCOF1-211ENST00000513346 ATP8B1O43520 1251 aa12.81□□□□□ -0.36
TCOF1-211ENST00000513346 INPP5BP32019 993 aa12.81□□□□□ -0.36
TCOF1-211ENST00000513346 MAP2K2P36507 400 aa12.81□□□□□ -0.36
TCOF1-211ENST00000513346 NCBP1Q09161 790 aaKnown RBP12.81□□□□□ -0.36
TCOF1-211ENST00000513346 IFFO1Q0D2I5 559 aa12.81□□□□□ -0.36
TCOF1-211ENST00000513346 G2E3Q7L622 706 aa12.81□□□□□ -0.36
TCOF1-211ENST00000513346 CRACR2BQ8N4Y2 399 aaPredicted RBP12.81□□□□□ -0.36
TCOF1-211ENST00000513346 LRRC2Q9BYS8 371 aa12.81□□□□□ -0.36
TCOF1-211ENST00000513346 NSFL1CQ9UNZ2 370 aaKnown RBP12.81□□□□□ -0.36
TCOF1-211ENST00000513346 GOLGA6L10A0A0M3HER8 536 aa12.81□□□□□ -0.36
TCOF1-211ENST00000513346 CLGNO14967 610 aa12.81□□□□□ -0.36
TCOF1-211ENST00000513346 SGSM2O43147 1006 aa12.81□□□□□ -0.36
TCOF1-211ENST00000513346 MATR3P43243 847 aaKnown RBP eCLIP12.81□□□□□ -0.36
TCOF1-211ENST00000513346 ETF1P62495 437 aaKnown RBP12.81□□□□□ -0.36
TCOF1-211ENST00000513346 HLTFQ14527 1009 aaKnown RBP eCLIP12.81□□□□□ -0.36
TCOF1-211ENST00000513346 TMEM132AQ24JP5 1023 aa12.81□□□□□ -0.36
TCOF1-211ENST00000513346 DDX46Q7L014 1031 aaKnown RBP12.81□□□□□ -0.36
TCOF1-211ENST00000513346 ZHX3Q9H4I2 956 aa12.81□□□□□ -0.36
TCOF1-211ENST00000513346 GOLIM4O00461 696 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms