RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 TMX4Q9H1E5 349 aaPredicted RBP9.43□□□□□ -0.9
HMGXB3-204ENST00000513318 COPRSQ9NQ92 184 aa9.43□□□□□ -0.9
HMGXB3-204ENST00000513318 BSDC1Q9NW68 430 aaPredicted RBP9.43□□□□□ -0.9
HMGXB3-204ENST00000513318 ATP6V0A2Q9Y487 856 aa9.43□□□□□ -0.9
HMGXB3-204ENST00000513318 ZNF646O15015 1829 aaPredicted RBP9.42□□□□□ -0.9
HMGXB3-204ENST00000513318 POTEFA5A3E0 1075 aa9.42□□□□□ -0.9
HMGXB3-204ENST00000513318 C7P10643 843 aa9.42□□□□□ -0.9
HMGXB3-204ENST00000513318 IRX5P78411 483 aaPredicted RBP9.42□□□□□ -0.9
HMGXB3-204ENST00000513318 CCDC93Q567U6 631 aa9.42□□□□□ -0.9
HMGXB3-204ENST00000513318 LDHAL6AQ6ZMR3 332 aa9.42□□□□□ -0.9
HMGXB3-204ENST00000513318 SP8Q8IXZ3 490 aa9.42□□□□□ -0.9
HMGXB3-204ENST00000513318 C7orf43Q8WVR3 580 aa9.42□□□□□ -0.9
HMGXB3-204ENST00000513318 ZNF594Q96JF6 807 aaPredicted RBP9.42□□□□□ -0.9
HMGXB3-204ENST00000513318 CNNM1Q9NRU3 951 aa9.42□□□□□ -0.9
HMGXB3-204ENST00000513318 METRNQ9UJH8 293 aa9.42□□□□□ -0.9
HMGXB3-204ENST00000513318 WWC3Q9ULE0 1092 aa9.42□□□□□ -0.9
HMGXB3-204ENST00000513318 SCN9AQ15858 1988 aa9.42□□□□□ -0.9
HMGXB3-204ENST00000513318 MYH7P12883 1935 aa9.42□□□□□ -0.9
HMGXB3-204ENST00000513318 AKAP11Q9UKA4 1901 aa9.41□□□□□ -0.9
HMGXB3-204ENST00000513318 EYA2O00167 538 aa9.41□□□□□ -0.9
HMGXB3-204ENST00000513318 C21orf2O43822 256 aa9.41□□□□□ -0.9
HMGXB3-204ENST00000513318 CIAO1O76071 339 aa9.41□□□□□ -0.9
HMGXB3-204ENST00000513318 YBX3P16989 372 aaKnown RBP eCLIP9.41□□□□□ -0.9
HMGXB3-204ENST00000513318 KLHDC4Q8TBB5 520 aa9.41□□□□□ -0.9
HMGXB3-204ENST00000513318 PA2G4Q9UQ80 394 aaKnown RBP9.41□□□□□ -0.9
HMGXB3-204ENST00000513318 COLQQ9Y215 455 aaPredicted RBP9.41□□□□□ -0.9
HMGXB3-204ENST00000513318 MYO5AQ9Y4I1 1855 aaKnown RBP9.4□□□□□ -0.9
HMGXB3-204ENST00000513318 XDHP47989 1333 aa9.4□□□□□ -0.9
HMGXB3-204ENST00000513318 MROH5Q6ZUA9 1318 aa9.4□□□□□ -0.9
HMGXB3-204ENST00000513318 LTBP3Q9NS15 1303 aa9.4□□□□□ -0.9
HMGXB3-204ENST00000513318 IL15P40933 162 aaPredicted RBP9.4□□□□□ -0.9
HMGXB3-204ENST00000513318 GPR162Q16538 588 aa9.4□□□□□ -0.9
HMGXB3-204ENST00000513318 SIRT2Q8IXJ6 389 aa9.4□□□□□ -0.9
HMGXB3-204ENST00000513318 RTKN2Q8IZC4 609 aa9.4□□□□□ -0.9
HMGXB3-204ENST00000513318 FBXO22Q8NEZ5 403 aa9.4□□□□□ -0.9
HMGXB3-204ENST00000513318 PUS3Q9BZE2 481 aaKnown RBP9.4□□□□□ -0.9
HMGXB3-204ENST00000513318 ANKRD2Q9GZV1 360 aa9.4□□□□□ -0.9
HMGXB3-204ENST00000513318 SIL1Q9H173 461 aa9.4□□□□□ -0.9
HMGXB3-204ENST00000513318 PODXL2Q9NZ53 605 aa9.4□□□□□ -0.9
HMGXB3-204ENST00000513318 MINPP1Q9UNW1 487 aa9.4□□□□□ -0.9
HMGXB3-204ENST00000513318 RIPOR2Q9Y4F9 1068 aa9.4□□□□□ -0.9
HMGXB3-204ENST00000513318 PCDHB15Q9Y5E8 787 aa9.4□□□□□ -0.9
HMGXB3-204ENST00000513318 SURF6O75683 361 aaKnown RBP9.39□□□□□ -0.91
HMGXB3-204ENST00000513318 CHRNDQ07001 517 aa9.39□□□□□ -0.91
HMGXB3-204ENST00000513318 G3BP1Q13283 466 aaKnown RBP eCLIP9.39□□□□□ -0.91
HMGXB3-204ENST00000513318 LRRC24Q50LG9 513 aa9.39□□□□□ -0.91
HMGXB3-204ENST00000513318 HSP90AB4PQ58FF6 505 aa9.39□□□□□ -0.91
HMGXB3-204ENST00000513318 METTL24Q5JXM2 366 aa9.39□□□□□ -0.91
HMGXB3-204ENST00000513318 OLFM4Q6UX06 510 aa9.39□□□□□ -0.91
HMGXB3-204ENST00000513318 DPP8Q6V1X1 898 aaPredicted RBP9.39□□□□□ -0.91
HMGXB3-204ENST00000513318 ATG9AQ7Z3C6 839 aa9.39□□□□□ -0.91
HMGXB3-204ENST00000513318 MPNDQ8N594 471 aa9.39□□□□□ -0.91
HMGXB3-204ENST00000513318 PDCD7Q8N8D1 485 aaKnown RBP9.39□□□□□ -0.91
HMGXB3-204ENST00000513318 SUPT20HQ8NEM7 779 aa9.39□□□□□ -0.91
HMGXB3-204ENST00000513318 MS4A4AQ96JQ5 239 aa9.39□□□□□ -0.91
HMGXB3-204ENST00000513318 PSMD1Q99460 953 aa9.39□□□□□ -0.91
HMGXB3-204ENST00000513318 TAOK3Q9H2K8 898 aa9.39□□□□□ -0.91
HMGXB3-204ENST00000513318 ANKIB1Q9P2G1 1089 aa9.39□□□□□ -0.91
HMGXB3-204ENST00000513318 NOP58Q9Y2X3 529 aaKnown RBP9.39□□□□□ -0.91
HMGXB3-204ENST00000513318 ZNF609O15014 1411 aa9.39□□□□□ -0.91
HMGXB3-204ENST00000513318 GRIN3BO60391 1043 aa9.38□□□□□ -0.91
HMGXB3-204ENST00000513318 ATP2B4P23634 1241 aa9.38□□□□□ -0.91
HMGXB3-204ENST00000513318 GPSM2P81274 684 aa9.38□□□□□ -0.91
HMGXB3-204ENST00000513318 FKBP4Q02790 459 aaKnown RBP eCLIP9.38□□□□□ -0.91
HMGXB3-204ENST00000513318 OS9Q13438 667 aaPredicted RBP9.38□□□□□ -0.91
HMGXB3-204ENST00000513318 HDAC1Q13547 482 aaPredicted RBP9.38□□□□□ -0.91
HMGXB3-204ENST00000513318 ERICH6BQ5W0A0 696 aa9.38□□□□□ -0.91
HMGXB3-204ENST00000513318 SLC51AQ86UW1 340 aa9.38□□□□□ -0.91
HMGXB3-204ENST00000513318 ERC1Q8IUD2 1116 aa9.38□□□□□ -0.91
HMGXB3-204ENST00000513318 VGLL2Q8N8G2 317 aa9.38□□□□□ -0.91
HMGXB3-204ENST00000513318 RTFDC1Q9BY42 306 aaPredicted RBP9.38□□□□□ -0.91
HMGXB3-204ENST00000513318 NSFL1CQ9UNZ2 370 aaKnown RBP9.38□□□□□ -0.91
HMGXB3-204ENST00000513318 EXOC6BQ9Y2D4 811 aa9.38□□□□□ -0.91
HMGXB3-204ENST00000513318 LEMD3Q9Y2U8 911 aa9.38□□□□□ -0.91
HMGXB3-204ENST00000513318 DOCK2Q92608 1830 aa9.38□□□□□ -0.91
HMGXB3-204ENST00000513318 MED23Q9ULK4 1368 aa9.37□□□□□ -0.91
HMGXB3-204ENST00000513318 NFKBIEO00221 500 aa9.37□□□□□ -0.91
HMGXB3-204ENST00000513318 GTPBP6O43824 516 aaPredicted RBP9.37□□□□□ -0.91
HMGXB3-204ENST00000513318 UFL1O94874 794 aa9.37□□□□□ -0.91
HMGXB3-204ENST00000513318 PDE8BO95263 885 aa9.37□□□□□ -0.91
HMGXB3-204ENST00000513318 UBE4AQ14139 1066 aa9.37□□□□□ -0.91
HMGXB3-204ENST00000513318 EYA3Q99504 573 aa9.37□□□□□ -0.91
HMGXB3-204ENST00000513318 RWDD1Q9H446 243 aaPredicted RBP9.37□□□□□ -0.91
HMGXB3-204ENST00000513318 OCEL1Q9H607 264 aa9.37□□□□□ -0.91
HMGXB3-204ENST00000513318 CEP126Q9P2H0 1117 aa9.37□□□□□ -0.91
HMGXB3-204ENST00000513318 GGA1Q9UJY5 639 aa9.37□□□□□ -0.91
HMGXB3-204ENST00000513318 ECM29Q5VYK3 1845 aa9.37□□□□□ -0.91
HMGXB3-204ENST00000513318 ZNF804BA4D1E1 1349 aa9.36□□□□□ -0.91
HMGXB3-204ENST00000513318 C6orf229H3BNL8 230 aa9.36□□□□□ -0.91
HMGXB3-204ENST00000513318 RAB11FIP3O75154 756 aa9.36□□□□□ -0.91
HMGXB3-204ENST00000513318 TAF5LO75529 589 aa9.36□□□□□ -0.91
HMGXB3-204ENST00000513318 SASH1O94885 1247 aa9.36□□□□□ -0.91
HMGXB3-204ENST00000513318 SEC24BO95487 1268 aa9.36□□□□□ -0.91
HMGXB3-204ENST00000513318 KCNJ4P48050 445 aa9.36□□□□□ -0.91
HMGXB3-204ENST00000513318 RASSF7Q02833 373 aa9.36□□□□□ -0.91
HMGXB3-204ENST00000513318 PUM3Q15397 648 aaKnown RBP9.36□□□□□ -0.91
HMGXB3-204ENST00000513318 ARHGAP27Q6ZUM4 889 aa9.36□□□□□ -0.91
HMGXB3-204ENST00000513318 HELBQ8NG08 1087 aaPredicted RBP9.36□□□□□ -0.91
HMGXB3-204ENST00000513318 TBC1D16Q8TBP0 767 aa9.36□□□□□ -0.91
HMGXB3-204ENST00000513318 GCC1Q96CN9 775 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms