RNA–Protein interactions for RNA: ENST00000513263.1

SKP2-207, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2

Gene SKP2, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-207ENST00000513263 EGFRP00533 1210 aa14□□□□□ -0.17
SKP2-207ENST00000513263 SLC10A3P09131 477 aa14□□□□□ -0.17
SKP2-207ENST00000513263 CCT4P50991 539 aaKnown RBP14□□□□□ -0.17
SKP2-207ENST00000513263 FLIIQ13045 1269 aa14□□□□□ -0.17
SKP2-207ENST00000513263 FKBP5Q13451 457 aaPredicted RBP14□□□□□ -0.17
SKP2-207ENST00000513263 STRIP1Q5VSL9 837 aa14□□□□□ -0.17
SKP2-207ENST00000513263 UBE3BQ7Z3V4 1068 aa14□□□□□ -0.17
SKP2-207ENST00000513263 TSPYL6Q8N831 410 aa14□□□□□ -0.17
SKP2-207ENST00000513263 CDCA5Q96FF9 252 aa14□□□□□ -0.17
SKP2-207ENST00000513263 CCDC85AQ96PX6 553 aaPredicted RBP14□□□□□ -0.17
SKP2-207ENST00000513263 GMLQ99445 158 aa14□□□□□ -0.17
SKP2-207ENST00000513263 GREM2Q9H772 168 aa14□□□□□ -0.17
SKP2-207ENST00000513263 HDAC9Q9UKV0 1011 aa14□□□□□ -0.17
SKP2-207ENST00000513263 SLC4A2P04920 1241 aa13.99□□□□□ -0.17
SKP2-207ENST00000513263 ZEB1P37275 1124 aaPredicted RBP13.99□□□□□ -0.17
SKP2-207ENST00000513263 KCNJ4P48050 445 aa13.99□□□□□ -0.17
SKP2-207ENST00000513263 SCARF1Q14162 830 aa13.99□□□□□ -0.17
SKP2-207ENST00000513263 GCKRQ14397 625 aa13.99□□□□□ -0.17
SKP2-207ENST00000513263 ANGEL2Q5VTE6 544 aaKnown RBP13.99□□□□□ -0.17
SKP2-207ENST00000513263 LINS1Q8NG48 757 aa13.99□□□□□ -0.17
SKP2-207ENST00000513263 KCNQ5Q9NR82 932 aa13.99□□□□□ -0.17
SKP2-207ENST00000513263 MINPP1Q9UNW1 487 aa13.99□□□□□ -0.17
SKP2-207ENST00000513263 FANCIQ9NVI1 1328 aa13.98□□□□□ -0.17
SKP2-207ENST00000513263 FAM155AB1AL88 458 aaPredicted RBP13.98□□□□□ -0.17
SKP2-207ENST00000513263 H7C1W4 665 aa13.98□□□□□ -0.17
SKP2-207ENST00000513263 CWF19L2Q2TBE0 894 aaKnown RBP13.98□□□□□ -0.17
SKP2-207ENST00000513263 APOBEC3FQ8IUX4 373 aaKnown RBP13.98□□□□□ -0.17
SKP2-207ENST00000513263 WDR63Q8IWG1 891 aa13.98□□□□□ -0.17
SKP2-207ENST00000513263 DNAAF4Q8WXU2 420 aa13.98□□□□□ -0.17
SKP2-207ENST00000513263 ZNF804BA4D1E1 1349 aa13.97□□□□□ -0.17
SKP2-207ENST00000513263 CCDC85CA6NKD9 419 aa13.97□□□□□ -0.17
SKP2-207ENST00000513263 ANP32CO43423 234 aa13.97□□□□□ -0.17
SKP2-207ENST00000513263 ITGA6P23229 1130 aa13.97□□□□□ -0.17
SKP2-207ENST00000513263 DACT2Q5SW24 774 aa13.97□□□□□ -0.17
SKP2-207ENST00000513263 MRS2Q9HD23 443 aa13.97□□□□□ -0.17
SKP2-207ENST00000513263 TSKSQ9UJT2 592 aa13.97□□□□□ -0.17
SKP2-207ENST00000513263 ANKRD18BA2A2Z9 1011 aa13.96□□□□□ -0.17
SKP2-207ENST00000513263 MLLT1Q03111 559 aaPredicted RBP13.96□□□□□ -0.17
SKP2-207ENST00000513263 MCOLN1Q9GZU1 580 aa13.96□□□□□ -0.17
SKP2-207ENST00000513263 MYH13Q9UKX3 1938 aa13.96□□□□□ -0.18
SKP2-207ENST00000513263 RGS19P49795 217 aa13.95□□□□□ -0.18
SKP2-207ENST00000513263 KIF23Q02241 960 aaPredicted RBP13.95□□□□□ -0.18
SKP2-207ENST00000513263 IFIT5Q13325 482 aaKnown RBP13.95□□□□□ -0.18
SKP2-207ENST00000513263 DGKZQ13574 1117 aa13.95□□□□□ -0.18
SKP2-207ENST00000513263 FAM161AQ3B820 660 aa13.95□□□□□ -0.18
SKP2-207ENST00000513263 RASAL3Q86YV0 1011 aa13.95□□□□□ -0.18
SKP2-207ENST00000513263 FBXW7Q969H0 707 aa13.95□□□□□ -0.18
SKP2-207ENST00000513263 TNRC18O15417 2968 aaPredicted RBP13.94□□□□□ -0.18
SKP2-207ENST00000513263 CSF1RP07333 972 aa13.94□□□□□ -0.18
SKP2-207ENST00000513263 SREBF2Q12772 1141 aa13.94□□□□□ -0.18
SKP2-207ENST00000513263 TTLL5Q6EMB2 1281 aa13.94□□□□□ -0.18
SKP2-207ENST00000513263 ZNF804AQ7Z570 1209 aa13.94□□□□□ -0.18
SKP2-207ENST00000513263 JARID2Q92833 1246 aaPredicted RBP13.94□□□□□ -0.18
SKP2-207ENST00000513263 PPP2R3BQ9Y5P8 575 aa13.94□□□□□ -0.18
SKP2-207ENST00000513263 WNT10BO00744 389 aa13.93□□□□□ -0.18
SKP2-207ENST00000513263 MYO1BO43795 1136 aa13.93□□□□□ -0.18
SKP2-207ENST00000513263 CASP7P55210 303 aa13.93□□□□□ -0.18
SKP2-207ENST00000513263 TTLL12Q14166 644 aaPredicted RBP13.93□□□□□ -0.18
SKP2-207ENST00000513263 C15orf52Q6ZUT6 534 aaKnown RBP13.93□□□□□ -0.18
SKP2-207ENST00000513263 G2E3Q7L622 706 aa13.93□□□□□ -0.18
SKP2-207ENST00000513263 UNCXA6NJT0 531 aa13.92□□□□□ -0.18
SKP2-207ENST00000513263 TRPA1O75762 1119 aa13.92□□□□□ -0.18
SKP2-207ENST00000513263 FKBP1AP62942 108 aaKnown RBP13.92□□□□□ -0.18
SKP2-207ENST00000513263 CHRNDQ07001 517 aa13.92□□□□□ -0.18
SKP2-207ENST00000513263 PKN2Q16513 984 aaKnown RBP13.92□□□□□ -0.18
SKP2-207ENST00000513263 NOM1Q5C9Z4 860 aaKnown RBP13.92□□□□□ -0.18
SKP2-207ENST00000513263 TAF7LQ5H9L4 462 aa13.92□□□□□ -0.18
SKP2-207ENST00000513263 ARMC9Q7Z3E5 817 aa13.92□□□□□ -0.18
SKP2-207ENST00000513263 RNF186Q9NXI6 227 aa13.92□□□□□ -0.18
SKP2-207ENST00000513263 ASTN2O75129 1339 aaPredicted RBP13.91□□□□□ -0.18
SKP2-207ENST00000513263 VAMP4O75379 141 aa13.91□□□□□ -0.18
SKP2-207ENST00000513263 CCDC57Q2TAC2 916 aa13.91□□□□□ -0.18
SKP2-207ENST00000513263 NBPF9Q3BBW0 867 aa13.91□□□□□ -0.18
SKP2-207ENST00000513263 CTU1Q7Z7A3 348 aaKnown RBP13.91□□□□□ -0.18
SKP2-207ENST00000513263 MTMR14Q8NCE2 650 aa13.91□□□□□ -0.18
SKP2-207ENST00000513263 ALDH1L1O75891 902 aa13.9□□□□□ -0.18
SKP2-207ENST00000513263 GTF2IP78347 998 aa13.9□□□□□ -0.18
SKP2-207ENST00000513263 DLK2Q6UY11 383 aa13.9□□□□□ -0.18
SKP2-207ENST00000513263 KIAA0825Q8IV33 1275 aa13.9□□□□□ -0.18
SKP2-207ENST00000513263 CSRNP1Q96S65 589 aa13.9□□□□□ -0.18
SKP2-207ENST00000513263 ZIC5Q96T25 663 aa13.9□□□□□ -0.18
SKP2-207ENST00000513263 CD209Q9NNX6 404 aa13.9□□□□□ -0.18
SKP2-207ENST00000513263 CHMP3Q9Y3E7 222 aa13.9□□□□□ -0.18
SKP2-207ENST00000513263 OTOFQ9HC10 1997 aa13.9□□□□□ -0.18
SKP2-207ENST00000513263 GRM8O00222 908 aa13.89□□□□□ -0.19
SKP2-207ENST00000513263 ALDH1A1P00352 501 aa13.89□□□□□ -0.19
SKP2-207ENST00000513263 EXOSC9Q06265 439 aaKnown RBP13.89□□□□□ -0.19
SKP2-207ENST00000513263 TNFAIP1Q13829 316 aa13.89□□□□□ -0.19
SKP2-207ENST00000513263 DLGAP5Q15398 846 aa13.89□□□□□ -0.19
SKP2-207ENST00000513263 C9orf78Q9NZ63 289 aaPredicted RBP13.89□□□□□ -0.19
SKP2-207ENST00000513263 PPP1R12BO60237 982 aaPredicted RBP13.88□□□□□ -0.19
SKP2-207ENST00000513263 SASH1O94885 1247 aa13.88□□□□□ -0.19
SKP2-207ENST00000513263 IL1R1P14778 569 aa13.88□□□□□ -0.19
SKP2-207ENST00000513263 BEND3Q5T5X7 828 aa13.88□□□□□ -0.19
SKP2-207ENST00000513263 CFHR5Q9BXR6 569 aa13.88□□□□□ -0.19
SKP2-207ENST00000513263 ZBTB48P10074 688 aaPredicted RBP13.87□□□□□ -0.19
SKP2-207ENST00000513263 TM4SF4P48230 202 aa13.87□□□□□ -0.19
SKP2-207ENST00000513263 INHBEP58166 350 aa13.87□□□□□ -0.19
SKP2-207ENST00000513263 SUPT20HL1Q3ZLR7 823 aa13.87□□□□□ -0.19
SKP2-207ENST00000513263 CCDC184Q52MB2 194 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms