RNA–Protein interactions for RNA: ENST00000513016.5

VCAN-209, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 8,483 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-209ENST00000513016 STAMBPO95630 424 aa4.85□□□□□ -1.63
VCAN-209ENST00000513016 GSE1Q14687 1217 aa4.85□□□□□ -1.63
VCAN-209ENST00000513016 MICU3Q86XE3 530 aa4.85□□□□□ -1.63
VCAN-209ENST00000513016 SLC52A2Q9HAB3 445 aa4.85□□□□□ -1.63
VCAN-209ENST00000513016 CEP83Q9Y592 693 aa4.85□□□□□ -1.63
VCAN-209ENST00000513016 NUP153P49790 1475 aaKnown RBP4.85□□□□□ -1.63
VCAN-209ENST00000513016 MAP3K19Q56UN5 1328 aa4.85□□□□□ -1.63
VCAN-209ENST00000513016 PLEKHG3A1L390 1219 aa4.85□□□□□ -1.63
VCAN-209ENST00000513016 FAM13AO94988 1023 aa4.85□□□□□ -1.63
VCAN-209ENST00000513016 ANXA1P04083 346 aa4.85□□□□□ -1.63
VCAN-209ENST00000513016 OSBPP22059 807 aa4.85□□□□□ -1.63
VCAN-209ENST00000513016 SSFA2P28290 1259 aa4.85□□□□□ -1.63
VCAN-209ENST00000513016 CHURC1Q8WUH1 139 aa4.85□□□□□ -1.63
VCAN-209ENST00000513016 AZI2Q9H6S1 392 aa4.85□□□□□ -1.63
VCAN-209ENST00000513016 PAG1Q9NWQ8 432 aa4.85□□□□□ -1.63
VCAN-209ENST00000513016 MAGI2Q86UL8 1455 aa4.85□□□□□ -1.63
VCAN-209ENST00000513016 YEATS4O95619 227 aa4.85□□□□□ -1.63
VCAN-209ENST00000513016 SPOUT1Q5T280 376 aaKnown RBP4.85□□□□□ -1.63
VCAN-209ENST00000513016 EDC4Q6P2E9 1401 aaKnown RBP4.85□□□□□ -1.63
VCAN-209ENST00000513016 RAB3GAP1Q15042 981 aa4.85□□□□□ -1.63
VCAN-209ENST00000513016 ELMSAN1Q6PJG2 1045 aa4.85□□□□□ -1.63
VCAN-209ENST00000513016 MROH5Q6ZUA9 1318 aa4.85□□□□□ -1.63
VCAN-209ENST00000513016 KIAA0556O60303 1618 aa4.85□□□□□ -1.63
VCAN-209ENST00000513016 KLF18A0A0U1RQI7 1052 aa4.85□□□□□ -1.63
VCAN-209ENST00000513016 USP8P40818 1118 aa4.85□□□□□ -1.63
VCAN-209ENST00000513016 ENOX2Q16206 610 aaKnown RBP4.85□□□□□ -1.63
VCAN-209ENST00000513016 CFAP100Q494V2 611 aa4.85□□□□□ -1.63
VCAN-209ENST00000513016 ARHGAP29Q52LW3 1261 aa4.85□□□□□ -1.63
VCAN-209ENST00000513016 MAGEB6Q8N7X4 407 aa4.85□□□□□ -1.63
VCAN-209ENST00000513016 JARID2Q92833 1246 aaPredicted RBP4.85□□□□□ -1.63
VCAN-209ENST00000513016 TEKT1Q969V4 418 aa4.85□□□□□ -1.63
VCAN-209ENST00000513016 ZSCAN16Q9H4T2 348 aaPredicted RBP4.85□□□□□ -1.63
VCAN-209ENST00000513016 TTC41PQ6P2S7 1318 aa4.85□□□□□ -1.63
VCAN-209ENST00000513016 SHANK2Q9UPX8 1470 aa4.85□□□□□ -1.63
VCAN-209ENST00000513016 ZEB2O60315 1214 aa4.85□□□□□ -1.63
VCAN-209ENST00000513016 NASPP49321 788 aaPredicted RBP4.85□□□□□ -1.63
VCAN-209ENST00000513016 HAND2P61296 217 aa4.85□□□□□ -1.63
VCAN-209ENST00000513016 TRMT1LQ7Z2T5 733 aaKnown RBP4.85□□□□□ -1.63
VCAN-209ENST00000513016 METTL22Q9BUU2 404 aaPredicted RBP4.85□□□□□ -1.63
VCAN-209ENST00000513016 HAUS2Q9NVX0 235 aa4.85□□□□□ -1.63
VCAN-209ENST00000513016 ERBB4Q15303 1308 aa4.85□□□□□ -1.63
VCAN-209ENST00000513016 TMEM94Q12767 1356 aa4.85□□□□□ -1.63
VCAN-209ENST00000513016 PTPRKQ15262 1439 aa4.85□□□□□ -1.63
VCAN-209ENST00000513016 LMAN1P49257 510 aa4.85□□□□□ -1.63
VCAN-209ENST00000513016 TDRD12Q587J7 1177 aaKnown RBP4.85□□□□□ -1.63
VCAN-209ENST00000513016 IFT74Q96LB3 600 aa4.85□□□□□ -1.63
VCAN-209ENST00000513016 RTEL1Q9NZ71 1219 aa4.85□□□□□ -1.63
VCAN-209ENST00000513016 PRPHP41219 470 aa4.84□□□□□ -1.63
VCAN-209ENST00000513016 NLRX1Q86UT6 975 aa4.84□□□□□ -1.63
VCAN-209ENST00000513016 UNC5CLQ8IV45 518 aa4.84□□□□□ -1.63
VCAN-209ENST00000513016 GOLGA6L7A0A1B0GV03 622 aa4.84□□□□□ -1.63
VCAN-209ENST00000513016 EYA2O00167 538 aa4.84□□□□□ -1.63
VCAN-209ENST00000513016 TRAK2O60296 914 aa4.84□□□□□ -1.63
VCAN-209ENST00000513016 PAFAH1B1P43034 410 aa4.84□□□□□ -1.63
VCAN-209ENST00000513016 CCDC93Q567U6 631 aa4.84□□□□□ -1.63
VCAN-209ENST00000513016 FILIP1Q7Z7B0 1213 aa4.84□□□□□ -1.63
VCAN-209ENST00000513016 LPIN2Q92539 896 aa4.84□□□□□ -1.63
VCAN-209ENST00000513016 FAM83GA6ND36 823 aa4.84□□□□□ -1.63
VCAN-209ENST00000513016 PPP1R2P41236 205 aa4.84□□□□□ -1.63
VCAN-209ENST00000513016 RPS8P62241 208 aaKnown RBP4.84□□□□□ -1.63
VCAN-209ENST00000513016 RBM6P78332 1123 aaKnown RBP4.84□□□□□ -1.63
VCAN-209ENST00000513016 SLC4A8Q2Y0W8 1093 aa4.84□□□□□ -1.63
VCAN-209ENST00000513016 CCDC102BQ68D86 513 aa4.84□□□□□ -1.63
VCAN-209ENST00000513016 GOLGA1Q92805 767 aa4.84□□□□□ -1.63
VCAN-209ENST00000513016 LZTS2Q9BRK4 669 aa4.84□□□□□ -1.63
VCAN-209ENST00000513016 ITGA6P23229 1130 aa4.84□□□□□ -1.63
VCAN-209ENST00000513016 CCT2P78371 535 aaKnown RBP4.84□□□□□ -1.63
VCAN-209ENST00000513016 MRPS9P82933 396 aaKnown RBP4.84□□□□□ -1.63
VCAN-209ENST00000513016 DNAJC10Q8IXB1 793 aa4.84□□□□□ -1.63
VCAN-209ENST00000513016 CARD10Q9BWT7 1032 aa4.84□□□□□ -1.63
VCAN-209ENST00000513016 GBP3Q9H0R5 595 aa4.84□□□□□ -1.63
VCAN-209ENST00000513016 DDX19AQ9NUU7 478 aaKnown RBP4.84□□□□□ -1.63
VCAN-209ENST00000513016 EXOC7Q9UPT5 735 aa4.84□□□□□ -1.63
VCAN-209ENST00000513016 RAD50Q92878 1312 aa4.84□□□□□ -1.63
VCAN-209ENST00000513016 EIF2AK4Q9P2K8 1649 aaKnown RBP4.84□□□□□ -1.63
VCAN-209ENST00000513016 ZSCAN12O43309 604 aa4.84□□□□□ -1.63
VCAN-209ENST00000513016 EIF3JO75822 258 aaKnown RBP4.84□□□□□ -1.63
VCAN-209ENST00000513016 GNPTABQ3T906 1256 aa4.84□□□□□ -1.63
VCAN-209ENST00000513016 HELBQ8NG08 1087 aaPredicted RBP4.84□□□□□ -1.63
VCAN-209ENST00000513016 CTNNBL1Q8WYA6 563 aaPredicted RBP4.84□□□□□ -1.63
VCAN-209ENST00000513016 ALG1Q9BT22 464 aa4.84□□□□□ -1.63
VCAN-209ENST00000513016 WDR70Q9NW82 654 aa4.84□□□□□ -1.63
VCAN-209ENST00000513016 GSTTP1A0A1W2PQM5 241 aa4.84□□□□□ -1.64
VCAN-209ENST00000513016 SPAG1Q07617 926 aa4.84□□□□□ -1.64
VCAN-209ENST00000513016 KLHL10Q6JEL2 608 aa4.84□□□□□ -1.64
VCAN-209ENST00000513016 RNF214Q8ND24 703 aa4.84□□□□□ -1.64
VCAN-209ENST00000513016 RGS22Q8NE09 1264 aa4.84□□□□□ -1.64
VCAN-209ENST00000513016 HELLSQ9NRZ9 838 aa4.84□□□□□ -1.64
VCAN-209ENST00000513016 SMTNP53814 917 aa4.84□□□□□ -1.64
VCAN-209ENST00000513016 KMT5BQ4FZB7 885 aa4.84□□□□□ -1.64
VCAN-209ENST00000513016 SREK1Q8WXA9 508 aaKnown RBP4.84□□□□□ -1.64
VCAN-209ENST00000513016 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP4.84□□□□□ -1.642e-7■■■■■ 28.3
VCAN-209ENST00000513016 KIF2AO00139 706 aaPredicted RBP4.83□□□□□ -1.64
VCAN-209ENST00000513016 MCM3P25205 808 aa4.83□□□□□ -1.64
VCAN-209ENST00000513016 CALRP27797 417 aaKnown RBP4.83□□□□□ -1.64
VCAN-209ENST00000513016 STAT6P42226 847 aa4.83□□□□□ -1.64
VCAN-209ENST00000513016 GUCY1B3Q02153 619 aa4.83□□□□□ -1.64
VCAN-209ENST00000513016 DALRD3Q5D0E6 543 aaKnown RBP4.83□□□□□ -1.64
VCAN-209ENST00000513016 AXDND1Q5T1B0 1012 aaPredicted RBP4.83□□□□□ -1.64
VCAN-209ENST00000513016 RTKN2Q8IZC4 609 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms