RNA–Protein interactions for RNA: ENST00000512669.1

LETM1-207, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 1 (best)

Gene LETM1, Length 966 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-207ENST00000512669 KSR2Q6VAB6 950 aa18.63■□□□□ 0.57
LETM1-207ENST00000512669 PODNQ7Z5L7 613 aa18.63■□□□□ 0.57
LETM1-207ENST00000512669 SCARF1Q14162 830 aa18.62■□□□□ 0.57
LETM1-207ENST00000512669 ANGEL2Q5VTE6 544 aaKnown RBP18.62■□□□□ 0.57
LETM1-207ENST00000512669 CDC5LQ99459 802 aaKnown RBP18.62■□□□□ 0.57
LETM1-207ENST00000512669 MYOZ2Q9NPC6 264 aa18.62■□□□□ 0.57
LETM1-207ENST00000512669 ZNF521Q96K83 1311 aa18.62■□□□□ 0.57
LETM1-207ENST00000512669 USP17L3A6NCW0 530 aa18.61■□□□□ 0.57
LETM1-207ENST00000512669 USP17L4A6NCW7 530 aa18.61■□□□□ 0.57
LETM1-207ENST00000512669 MMP14P50281 582 aa18.61■□□□□ 0.57
LETM1-207ENST00000512669 USP17L1Q7RTZ2 530 aa18.61■□□□□ 0.57
LETM1-207ENST00000512669 RASAL3Q86YV0 1011 aa18.61■□□□□ 0.57
LETM1-207ENST00000512669 CSRNP1Q96S65 589 aa18.61■□□□□ 0.57
LETM1-207ENST00000512669 STK31Q9BXU1 1019 aa18.61■□□□□ 0.57
LETM1-207ENST00000512669 MED23Q9ULK4 1368 aa18.6■□□□□ 0.57
LETM1-207ENST00000512669 CTU1Q7Z7A3 348 aaKnown RBP18.6■□□□□ 0.57
LETM1-207ENST00000512669 GMLQ99445 158 aa18.6■□□□□ 0.57
LETM1-207ENST00000512669 MYO3BQ8WXR4 1341 aa18.59■□□□□ 0.57
LETM1-207ENST00000512669 ASTN2O75129 1339 aaPredicted RBP18.58■□□□□ 0.57
LETM1-207ENST00000512669 CTSWP56202 376 aa18.58■□□□□ 0.56
LETM1-207ENST00000512669 FLIIQ13045 1269 aa18.58■□□□□ 0.56
LETM1-207ENST00000512669 PKN2Q16513 984 aaKnown RBP18.58■□□□□ 0.56
LETM1-207ENST00000512669 CWF19L2Q2TBE0 894 aaKnown RBP18.58■□□□□ 0.56
LETM1-207ENST00000512669 OGFOD1Q8N543 542 aa18.58■□□□□ 0.56
LETM1-207ENST00000512669 PCDH10Q9P2E7 1040 aa18.58■□□□□ 0.56
LETM1-207ENST00000512669 MYH3P11055 1940 aa18.58■□□□□ 0.56
LETM1-207ENST00000512669 NEURL1BA8MQ27 555 aa18.57■□□□□ 0.56
LETM1-207ENST00000512669 NF2P35240 595 aa18.57■□□□□ 0.56
LETM1-207ENST00000512669 BSDC1Q9NW68 430 aaPredicted RBP18.57■□□□□ 0.56
LETM1-207ENST00000512669 NEXNQ0ZGT2 675 aa18.56■□□□□ 0.56
LETM1-207ENST00000512669 H7C1W4 665 aa18.55■□□□□ 0.56
LETM1-207ENST00000512669 NOM1Q5C9Z4 860 aaKnown RBP18.55■□□□□ 0.56
LETM1-207ENST00000512669 CCDC85AQ96PX6 553 aaPredicted RBP18.55■□□□□ 0.56
LETM1-207ENST00000512669 STRIP1Q5VSL9 837 aa18.54■□□□□ 0.56
LETM1-207ENST00000512669 TTLL11Q8NHH1 800 aa18.54■□□□□ 0.56
LETM1-207ENST00000512669 COA1Q9GZY4 146 aa18.54■□□□□ 0.56
LETM1-207ENST00000512669 MYH16Q9H6N6 1097 aa18.54■□□□□ 0.56
LETM1-207ENST00000512669 MINPP1Q9UNW1 487 aa18.54■□□□□ 0.56
LETM1-207ENST00000512669 CCT4P50991 539 aaKnown RBP18.53■□□□□ 0.56
LETM1-207ENST00000512669 CASP7P55210 303 aa18.53■□□□□ 0.56
LETM1-207ENST00000512669 SOX10P56693 466 aa18.53■□□□□ 0.56
LETM1-207ENST00000512669 FKBP5Q13451 457 aaPredicted RBP18.53■□□□□ 0.56
LETM1-207ENST00000512669 DACT2Q5SW24 774 aa18.53■□□□□ 0.56
LETM1-207ENST00000512669 HDAC9Q9UKV0 1011 aa18.53■□□□□ 0.56
LETM1-207ENST00000512669 LEMD3Q9Y2U8 911 aa18.53■□□□□ 0.56
LETM1-207ENST00000512669 IGHMBP2P38935 993 aaKnown RBP18.52■□□□□ 0.56
LETM1-207ENST00000512669 SREBF2Q12772 1141 aa18.52■□□□□ 0.56
LETM1-207ENST00000512669 TTLL12Q14166 644 aaPredicted RBP18.52■□□□□ 0.56
LETM1-207ENST00000512669 GCKRQ14397 625 aa18.52■□□□□ 0.56
LETM1-207ENST00000512669 DNAAF4Q8WXU2 420 aa18.52■□□□□ 0.56
LETM1-207ENST00000512669 SPEF2Q9C093 1822 aa18.51■□□□□ 0.55
LETM1-207ENST00000512669 F6X3S4 739 aa18.51■□□□□ 0.55
LETM1-207ENST00000512669 TM4SF4P48230 202 aa18.51■□□□□ 0.55
LETM1-207ENST00000512669 NBPF9Q3BBW0 867 aa18.51■□□□□ 0.55
LETM1-207ENST00000512669 APOBEC3FQ8IUX4 373 aaKnown RBP18.51■□□□□ 0.55
LETM1-207ENST00000512669 ANKRD2Q9GZV1 360 aa18.51■□□□□ 0.55
LETM1-207ENST00000512669 GREM2Q9H772 168 aa18.51■□□□□ 0.55
LETM1-207ENST00000512669 COL1A1P02452 1464 aaPredicted RBP18.51■□□□□ 0.55
LETM1-207ENST00000512669 ZNF646O15015 1829 aaPredicted RBP18.51■□□□□ 0.55
LETM1-207ENST00000512669 UBE2Q2LH0YL09 131 aa18.5■□□□□ 0.55
LETM1-207ENST00000512669 WNT10BO00744 389 aa18.5■□□□□ 0.55
LETM1-207ENST00000512669 ARMC9Q7Z3E5 817 aa18.5■□□□□ 0.55
LETM1-207ENST00000512669 CFHR5Q9BXR6 569 aa18.5■□□□□ 0.55
LETM1-207ENST00000512669 HPS5Q9UPZ3 1129 aa18.5■□□□□ 0.55
LETM1-207ENST00000512669 WTIPA6NIX2 430 aaPredicted RBP18.49■□□□□ 0.55
LETM1-207ENST00000512669 BEND3Q5T5X7 828 aa18.49■□□□□ 0.55
LETM1-207ENST00000512669 UBE3BQ7Z3V4 1068 aa18.49■□□□□ 0.55
LETM1-207ENST00000512669 LINS1Q8NG48 757 aa18.49■□□□□ 0.55
LETM1-207ENST00000512669 ZNF296Q8WUU4 475 aaPredicted RBP18.49■□□□□ 0.55
LETM1-207ENST00000512669 FBXW7Q969H0 707 aa18.49■□□□□ 0.55
LETM1-207ENST00000512669 CCER2I3L3R5 266 aa18.48■□□□□ 0.55
LETM1-207ENST00000512669 PRPF38BQ5VTL8 546 aaKnown RBP18.48■□□□□ 0.55
LETM1-207ENST00000512669 MOB2Q70IA6 237 aa18.48■□□□□ 0.55
LETM1-207ENST00000512669 CDCA7LQ96GN5 454 aa18.48■□□□□ 0.55
LETM1-207ENST00000512669 PLA2G12BQ9BX93 195 aa18.48■□□□□ 0.55
LETM1-207ENST00000512669 ZNF804BA4D1E1 1349 aa18.48■□□□□ 0.55
LETM1-207ENST00000512669 ALDH1A1P00352 501 aa18.47■□□□□ 0.55
LETM1-207ENST00000512669 SLFN5Q08AF3 891 aa18.47■□□□□ 0.55
LETM1-207ENST00000512669 TTLL5Q6EMB2 1281 aa18.47■□□□□ 0.55
LETM1-207ENST00000512669 MPHOSPH8Q99549 860 aa18.47■□□□□ 0.55
LETM1-207ENST00000512669 TNRC18O15417 2968 aaPredicted RBP18.47■□□□□ 0.55
LETM1-207ENST00000512669 GPR25O00155 361 aa18.46■□□□□ 0.55
LETM1-207ENST00000512669 TBC1D8O95759 1140 aa18.46■□□□□ 0.55
LETM1-207ENST00000512669 CSF1RP07333 972 aa18.46■□□□□ 0.55
LETM1-207ENST00000512669 SASH1O94885 1247 aa18.45■□□□□ 0.54
LETM1-207ENST00000512669 ITGA6P23229 1130 aa18.45■□□□□ 0.54
LETM1-207ENST00000512669 KCNJ4P48050 445 aa18.45■□□□□ 0.54
LETM1-207ENST00000512669 PRAMEF18Q5VWM3 479 aa18.45■□□□□ 0.54
LETM1-207ENST00000512669 FBXO46Q6PJ61 603 aaPredicted RBP18.45■□□□□ 0.54
LETM1-207ENST00000512669 TRMT2AQ8IZ69 625 aaKnown RBP18.45■□□□□ 0.54
LETM1-207ENST00000512669 MRPL50Q8N5N7 158 aaKnown RBP18.45■□□□□ 0.54
LETM1-207ENST00000512669 MXD3Q9BW11 206 aa18.45■□□□□ 0.54
LETM1-207ENST00000512669 SCAF8Q9UPN6 1271 aaKnown RBP18.45■□□□□ 0.54
LETM1-207ENST00000512669 PPP2R3BQ9Y5P8 575 aa18.45■□□□□ 0.54
LETM1-207ENST00000512669 CACNA1FO60840 1977 aa18.44■□□□□ 0.54
LETM1-207ENST00000512669 UNCXA6NJT0 531 aa18.44■□□□□ 0.54
LETM1-207ENST00000512669 E9PSI1 815 aa18.44■□□□□ 0.54
LETM1-207ENST00000512669 FKTNO75072 461 aa18.44■□□□□ 0.54
LETM1-207ENST00000512669 INHBEP58166 350 aa18.44■□□□□ 0.54
LETM1-207ENST00000512669 KIAA0825Q8IV33 1275 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 121.6 ms