RNA–Protein interactions for RNA: ENST00000512340.5

NR1I3-231, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 891 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-231ENST00000512340 HACL1Q9UJ83 578 aa9.25□□□□□ -0.93
NR1I3-231ENST00000512340 ZBTB7BO15156 539 aaPredicted RBP9.24□□□□□ -0.93
NR1I3-231ENST00000512340 PDE8BO95263 885 aa9.24□□□□□ -0.93
NR1I3-231ENST00000512340 ATP8B2P98198 1209 aa9.24□□□□□ -0.93
NR1I3-231ENST00000512340 C15orf52Q6ZUT6 534 aaKnown RBP9.24□□□□□ -0.93
NR1I3-231ENST00000512340 ERC1Q8IUD2 1116 aa9.24□□□□□ -0.93
NR1I3-231ENST00000512340 OGFOD1Q8N543 542 aa9.24□□□□□ -0.93
NR1I3-231ENST00000512340 PANK1Q8TE04 598 aa9.24□□□□□ -0.93
NR1I3-231ENST00000512340 L3MBTL3Q96JM7 780 aaPredicted RBP9.24□□□□□ -0.93
NR1I3-231ENST00000512340 DBNDD1Q9H9R9 158 aa9.24□□□□□ -0.93
NR1I3-231ENST00000512340 RRAGCQ9HB90 399 aa9.24□□□□□ -0.93
NR1I3-231ENST00000512340 COPRSQ9NQ92 184 aa9.24□□□□□ -0.93
NR1I3-231ENST00000512340 COG6Q9Y2V7 657 aa9.24□□□□□ -0.93
NR1I3-231ENST00000512340 LRRC37AA6NMS7 1700 aa9.24□□□□□ -0.93
NR1I3-231ENST00000512340 MYO3BQ8WXR4 1341 aa9.24□□□□□ -0.93
NR1I3-231ENST00000512340 TAF1P21675 1872 aa9.23□□□□□ -0.93
NR1I3-231ENST00000512340 SNED1Q8TER0 1413 aa9.23□□□□□ -0.93
NR1I3-231ENST00000512340 USP17L3A6NCW0 530 aa9.23□□□□□ -0.93
NR1I3-231ENST00000512340 USP17L4A6NCW7 530 aa9.23□□□□□ -0.93
NR1I3-231ENST00000512340 DDNO94850 711 aaPredicted RBP9.23□□□□□ -0.93
NR1I3-231ENST00000512340 RLBP1P12271 317 aa9.23□□□□□ -0.93
NR1I3-231ENST00000512340 HIBADHP31937 336 aaKnown RBP9.23□□□□□ -0.93
NR1I3-231ENST00000512340 PTPN12Q05209 780 aaKnown RBP9.23□□□□□ -0.93
NR1I3-231ENST00000512340 DOK7Q18PE1 504 aa9.23□□□□□ -0.93
NR1I3-231ENST00000512340 GORABQ5T7V8 394 aa9.23□□□□□ -0.93
NR1I3-231ENST00000512340 USP17L1Q7RTZ2 530 aa9.23□□□□□ -0.93
NR1I3-231ENST00000512340 HELBQ8NG08 1087 aaPredicted RBP9.23□□□□□ -0.93
NR1I3-231ENST00000512340 LPIN2Q92539 896 aa9.23□□□□□ -0.93
NR1I3-231ENST00000512340 DPF2Q92785 391 aa9.23□□□□□ -0.93
NR1I3-231ENST00000512340 FBXW7Q969H0 707 aa9.23□□□□□ -0.93
NR1I3-231ENST00000512340 SIL1Q9H173 461 aa9.23□□□□□ -0.93
NR1I3-231ENST00000512340 ZBTB47Q9UFB7 747 aaPredicted RBP9.23□□□□□ -0.93
NR1I3-231ENST00000512340 HDAC9Q9UKV0 1011 aa9.23□□□□□ -0.93
NR1I3-231ENST00000512340 RIPOR2Q9Y4F9 1068 aa9.23□□□□□ -0.93
NR1I3-231ENST00000512340 TAF5LO75529 589 aa9.22□□□□□ -0.93
NR1I3-231ENST00000512340 RAD17O75943 681 aa9.22□□□□□ -0.93
NR1I3-231ENST00000512340 RRP1P56182 461 aaKnown RBP9.22□□□□□ -0.93
NR1I3-231ENST00000512340 CXCL9Q07325 125 aa9.22□□□□□ -0.93
NR1I3-231ENST00000512340 ATP2B3Q16720 1220 aa9.22□□□□□ -0.93
NR1I3-231ENST00000512340 STRIP1Q5VSL9 837 aa9.22□□□□□ -0.93
NR1I3-231ENST00000512340 AGBL3Q8NEM8 1001 aa9.22□□□□□ -0.93
NR1I3-231ENST00000512340 CLEC11AQ9Y240 323 aa9.22□□□□□ -0.93
NR1I3-231ENST00000512340 ZNF541Q9H0D2 1346 aa9.22□□□□□ -0.93
NR1I3-231ENST00000512340 TIAM2Q8IVF5 1701 aa9.22□□□□□ -0.93
NR1I3-231ENST00000512340 SURF6O75683 361 aaKnown RBP9.21□□□□□ -0.94
NR1I3-231ENST00000512340 EPHX2P34913 555 aa9.21□□□□□ -0.94
NR1I3-231ENST00000512340 RFX5P48382 616 aaPredicted RBP9.21□□□□□ -0.94
NR1I3-231ENST00000512340 LRRC24Q50LG9 513 aa9.21□□□□□ -0.94
NR1I3-231ENST00000512340 TTLL5Q6EMB2 1281 aa9.21□□□□□ -0.94
NR1I3-231ENST00000512340 USP50Q70EL3 339 aaPredicted RBP9.21□□□□□ -0.94
NR1I3-231ENST00000512340 SSH3Q8TE77 659 aa9.21□□□□□ -0.94
NR1I3-231ENST00000512340 TBC1D22AQ8WUA7 517 aa9.21□□□□□ -0.94
NR1I3-231ENST00000512340 PUS3Q9BZE2 481 aaKnown RBP9.21□□□□□ -0.94
NR1I3-231ENST00000512340 ADARB2Q9NS39 739 aaKnown RBP9.21□□□□□ -0.94
NR1I3-231ENST00000512340 TNNQ9UQP3 1299 aa9.21□□□□□ -0.94
NR1I3-231ENST00000512340 SPEF2Q9C093 1822 aa9.2□□□□□ -0.94
NR1I3-231ENST00000512340 PSMD14O00487 310 aa9.2□□□□□ -0.94
NR1I3-231ENST00000512340 SEMA3EO15041 775 aa9.2□□□□□ -0.94
NR1I3-231ENST00000512340 SASH1O94885 1247 aa9.2□□□□□ -0.94
NR1I3-231ENST00000512340 VIL1P09327 827 aaKnown RBP9.2□□□□□ -0.94
NR1I3-231ENST00000512340 HSPA1AP0DMV8 641 aaKnown RBP9.2□□□□□ -0.94
NR1I3-231ENST00000512340 HSPA1BP0DMV9 641 aaKnown RBP9.2□□□□□ -0.94
NR1I3-231ENST00000512340 GMPSP49915 693 aaPredicted RBP9.2□□□□□ -0.94
NR1I3-231ENST00000512340 EAPPQ56P03 285 aaPredicted RBP9.2□□□□□ -0.94
NR1I3-231ENST00000512340 RSBN1LQ6PCB5 846 aaPredicted RBP9.2□□□□□ -0.94
NR1I3-231ENST00000512340 LDHDQ86WU2 507 aa9.2□□□□□ -0.94
NR1I3-231ENST00000512340 KLHDC4Q8TBB5 520 aa9.2□□□□□ -0.94
NR1I3-231ENST00000512340 TAF1DQ9H5J8 278 aaPredicted RBP9.2□□□□□ -0.94
NR1I3-231ENST00000512340 CD209Q9NNX6 404 aa9.2□□□□□ -0.94
NR1I3-231ENST00000512340 ZBTB40Q9NUA8 1239 aa9.2□□□□□ -0.94
NR1I3-231ENST00000512340 GPRC5DQ9NZD1 345 aa9.2□□□□□ -0.94
NR1I3-231ENST00000512340 CNOT7Q9UIV1 285 aaKnown RBP9.2□□□□□ -0.94
NR1I3-231ENST00000512340 SCN4AP35499 1836 aa9.19□□□□□ -0.94
NR1I3-231ENST00000512340 RAB11FIP3O75154 756 aa9.19□□□□□ -0.94
NR1I3-231ENST00000512340 CAPN15O75808 1086 aa9.19□□□□□ -0.94
NR1I3-231ENST00000512340 USP17L8P0C7I0 530 aa9.19□□□□□ -0.94
NR1I3-231ENST00000512340 IL1R1P14778 569 aa9.19□□□□□ -0.94
NR1I3-231ENST00000512340 FKBP1AP62942 108 aaKnown RBP9.19□□□□□ -0.94
NR1I3-231ENST00000512340 GTF2IP78347 998 aa9.19□□□□□ -0.94
NR1I3-231ENST00000512340 POLA2Q14181 598 aa9.19□□□□□ -0.94
NR1I3-231ENST00000512340 CEP85Q6P2H3 762 aa9.19□□□□□ -0.94
NR1I3-231ENST00000512340 ZGPATQ8N5A5 531 aaKnown RBP9.19□□□□□ -0.94
NR1I3-231ENST00000512340 WDR66Q8TBY9 1149 aa9.19□□□□□ -0.94
NR1I3-231ENST00000512340 ZC3H15Q8WU90 426 aaKnown RBP9.19□□□□□ -0.94
NR1I3-231ENST00000512340 NEUROD6Q96NK8 337 aa9.19□□□□□ -0.94
NR1I3-231ENST00000512340 GPR101Q96P66 508 aaPredicted RBP9.19□□□□□ -0.94
NR1I3-231ENST00000512340 C1orf115Q9H7X2 142 aa9.19□□□□□ -0.94
NR1I3-231ENST00000512340 GPR108Q9NPR9 543 aa9.19□□□□□ -0.94
NR1I3-231ENST00000512340 PA2G4Q9UQ80 394 aaKnown RBP9.19□□□□□ -0.94
NR1I3-231ENST00000512340 MAST3O60307 1309 aa9.19□□□□□ -0.94
NR1I3-231ENST00000512340 PNMA6EA0A0J9YXQ4 647 aa9.18□□□□□ -0.94
NR1I3-231ENST00000512340 YDJCA8MPS7 323 aa9.18□□□□□ -0.94
NR1I3-231ENST00000512340 MYO1BO43795 1136 aa9.18□□□□□ -0.94
NR1I3-231ENST00000512340 UQCRFS1P1P0C7P4 283 aa9.18□□□□□ -0.94
NR1I3-231ENST00000512340 CCDC158Q5M9N0 1113 aa9.18□□□□□ -0.94
NR1I3-231ENST00000512340 CHADLQ6NUI6 762 aa9.18□□□□□ -0.94
NR1I3-231ENST00000512340 ATG9AQ7Z3C6 839 aa9.18□□□□□ -0.94
NR1I3-231ENST00000512340 MICALL2Q8IY33 904 aa9.18□□□□□ -0.94
NR1I3-231ENST00000512340 CLASRPQ8N2M8 674 aaKnown RBP9.18□□□□□ -0.94
NR1I3-231ENST00000512340 FAM84BQ96KN1 310 aaPredicted RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms