RNA–Protein interactions for RNA: ENST00000512293.1

PDLIM3-207, Transcript of PDZ and LIM domain 3, humanhuman

TSL 3

Gene PDLIM3, Length 581 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-207ENST00000512293 PI4KAP1Q8N8J0 262 aa22.5■■□□□ 1.19
PDLIM3-207ENST00000512293 MYO3BQ8WXR4 1341 aa22.5■■□□□ 1.19
PDLIM3-207ENST00000512293 NEXNQ0ZGT2 675 aa22.49■■□□□ 1.19
PDLIM3-207ENST00000512293 TSPYL6Q8N831 410 aa22.49■■□□□ 1.19
PDLIM3-207ENST00000512293 SPEF2Q9C093 1822 aa22.49■■□□□ 1.19
PDLIM3-207ENST00000512293 CCT4P50991 539 aaKnown RBP22.48■■□□□ 1.19
PDLIM3-207ENST00000512293 DACT2Q5SW24 774 aa22.48■■□□□ 1.19
PDLIM3-207ENST00000512293 STRIP1Q5VSL9 837 aa22.48■■□□□ 1.19
PDLIM3-207ENST00000512293 GREM2Q9H772 168 aa22.48■■□□□ 1.19
PDLIM3-207ENST00000512293 OGFOD1Q8N543 542 aa22.47■■□□□ 1.19
PDLIM3-207ENST00000512293 STK31Q9BXU1 1019 aa22.47■■□□□ 1.19
PDLIM3-207ENST00000512293 COA1Q9GZY4 146 aa22.47■■□□□ 1.19
PDLIM3-207ENST00000512293 LEMD3Q9Y2U8 911 aa22.47■■□□□ 1.19
PDLIM3-207ENST00000512293 NEURL1BA8MQ27 555 aa22.46■■□□□ 1.19
PDLIM3-207ENST00000512293 H7C1W4 665 aa22.46■■□□□ 1.19
PDLIM3-207ENST00000512293 CCDC27Q2M243 656 aa22.46■■□□□ 1.19
PDLIM3-207ENST00000512293 PLA2G12BQ9BX93 195 aa22.46■■□□□ 1.19
PDLIM3-207ENST00000512293 WTIPA6NIX2 430 aaPredicted RBP22.45■■□□□ 1.18
PDLIM3-207ENST00000512293 NBPF9Q3BBW0 867 aa22.45■■□□□ 1.18
PDLIM3-207ENST00000512293 CTU1Q7Z7A3 348 aaKnown RBP22.45■■□□□ 1.18
PDLIM3-207ENST00000512293 CACNA1FO60840 1977 aa22.45■■□□□ 1.18
PDLIM3-207ENST00000512293 PDE4DIPQ5VU43 2346 aa22.45■■□□□ 1.18
PDLIM3-207ENST00000512293 WNT10BO00744 389 aa22.44■■□□□ 1.18
PDLIM3-207ENST00000512293 NOM1Q5C9Z4 860 aaKnown RBP22.44■■□□□ 1.18
PDLIM3-207ENST00000512293 IGHMBP2P38935 993 aaKnown RBP22.43■■□□□ 1.18
PDLIM3-207ENST00000512293 CWF19L2Q2TBE0 894 aaKnown RBP22.43■■□□□ 1.18
PDLIM3-207ENST00000512293 ANKRD2Q9GZV1 360 aa22.43■■□□□ 1.18
PDLIM3-207ENST00000512293 TM4SF4P48230 202 aa22.42■■□□□ 1.18
PDLIM3-207ENST00000512293 PKN2Q16513 984 aaKnown RBP22.42■■□□□ 1.18
PDLIM3-207ENST00000512293 NCBP3Q53F19 620 aaKnown RBP22.42■■□□□ 1.18
PDLIM3-207ENST00000512293 UBE2Q2LH0YL09 131 aa22.41■■□□□ 1.18
PDLIM3-207ENST00000512293 NF2P35240 595 aa22.41■■□□□ 1.18
PDLIM3-207ENST00000512293 GCKRQ14397 625 aa22.41■■□□□ 1.18
PDLIM3-207ENST00000512293 TWISTNBQ3B726 338 aaPredicted RBP22.41■■□□□ 1.18
PDLIM3-207ENST00000512293 UBE3BQ7Z3V4 1068 aa22.41■■□□□ 1.18
PDLIM3-207ENST00000512293 TXNRD3Q86VQ6 643 aa22.41■■□□□ 1.18
PDLIM3-207ENST00000512293 TSR2Q969E8 191 aaKnown RBP22.41■■□□□ 1.18
PDLIM3-207ENST00000512293 ZNF804BA4D1E1 1349 aa22.4■■□□□ 1.18
PDLIM3-207ENST00000512293 IL16Q14005 1332 aa22.4■■□□□ 1.18
PDLIM3-207ENST00000512293 CSF1RP07333 972 aa22.4■■□□□ 1.18
PDLIM3-207ENST00000512293 CASP7P55210 303 aa22.4■■□□□ 1.18
PDLIM3-207ENST00000512293 TTLL5Q6EMB2 1281 aa22.4■■□□□ 1.18
PDLIM3-207ENST00000512293 MOB2Q70IA6 237 aa22.4■■□□□ 1.18
PDLIM3-207ENST00000512293 MXD3Q9BW11 206 aa22.4■■□□□ 1.18
PDLIM3-207ENST00000512293 SLC4A2P04920 1241 aa22.39■■□□□ 1.17
PDLIM3-207ENST00000512293 ITGA6P23229 1130 aa22.39■■□□□ 1.17
PDLIM3-207ENST00000512293 G2E3Q7L622 706 aa22.39■■□□□ 1.17
PDLIM3-207ENST00000512293 APOBEC3FQ8IUX4 373 aaKnown RBP22.39■■□□□ 1.17
PDLIM3-207ENST00000512293 WWC1Q8IX03 1113 aa22.39■■□□□ 1.17
PDLIM3-207ENST00000512293 ZBED3Q96IU2 234 aaPredicted RBP22.39■■□□□ 1.17
PDLIM3-207ENST00000512293 CFHR5Q9BXR6 569 aa22.39■■□□□ 1.17
PDLIM3-207ENST00000512293 SCAF8Q9UPN6 1271 aaKnown RBP22.39■■□□□ 1.17
PDLIM3-207ENST00000512293 PRAMEF18Q5VWM3 479 aa22.38■■□□□ 1.17
PDLIM3-207ENST00000512293 MPHOSPH8Q99549 860 aa22.38■■□□□ 1.17
PDLIM3-207ENST00000512293 MYH16Q9H6N6 1097 aa22.38■■□□□ 1.17
PDLIM3-207ENST00000512293 HDAC9Q9UKV0 1011 aa22.38■■□□□ 1.17
PDLIM3-207ENST00000512293 COL1A1P02452 1464 aaPredicted RBP22.38■■□□□ 1.17
PDLIM3-207ENST00000512293 SOX10P56693 466 aa22.36■■□□□ 1.17
PDLIM3-207ENST00000512293 SREBF2Q12772 1141 aa22.36■■□□□ 1.17
PDLIM3-207ENST00000512293 FLIIQ13045 1269 aa22.36■■□□□ 1.17
PDLIM3-207ENST00000512293 TTLL12Q14166 644 aaPredicted RBP22.36■■□□□ 1.17
PDLIM3-207ENST00000512293 C15orf52Q6ZUT6 534 aaKnown RBP22.36■■□□□ 1.17
PDLIM3-207ENST00000512293 ARMC9Q7Z3E5 817 aa22.36■■□□□ 1.17
PDLIM3-207ENST00000512293 LINS1Q8NG48 757 aa22.36■■□□□ 1.17
PDLIM3-207ENST00000512293 ZNF296Q8WUU4 475 aaPredicted RBP22.36■■□□□ 1.17
PDLIM3-207ENST00000512293 FBXW7Q969H0 707 aa22.36■■□□□ 1.17
PDLIM3-207ENST00000512293 SASH1O94885 1247 aa22.35■■□□□ 1.17
PDLIM3-207ENST00000512293 LDLRAD1Q5T700 205 aa22.35■■□□□ 1.17
PDLIM3-207ENST00000512293 MTMR14Q8NCE2 650 aa22.35■■□□□ 1.17
PDLIM3-207ENST00000512293 DNAAF4Q8WXU2 420 aa22.35■■□□□ 1.17
PDLIM3-207ENST00000512293 HPS5Q9UPZ3 1129 aa22.35■■□□□ 1.17
PDLIM3-207ENST00000512293 IRS2Q9Y4H2 1338 aa22.34■■□□□ 1.17
PDLIM3-207ENST00000512293 ECM29Q5VYK3 1845 aa22.34■■□□□ 1.17
PDLIM3-207ENST00000512293 TBC1D8O95759 1140 aa22.34■■□□□ 1.17
PDLIM3-207ENST00000512293 KLRK1P26718 216 aa22.34■■□□□ 1.17
PDLIM3-207ENST00000512293 CHRNDQ07001 517 aa22.34■■□□□ 1.17
PDLIM3-207ENST00000512293 KIAA0825Q8IV33 1275 aa22.34■■□□□ 1.17
PDLIM3-207ENST00000512293 CD209Q9NNX6 404 aa22.34■■□□□ 1.17
PDLIM3-207ENST00000512293 LAMB1P07942 1786 aa22.34■■□□□ 1.17
PDLIM3-207ENST00000512293 A0A1B0GUL6 1792 aa22.33■■□□□ 1.17
PDLIM3-207ENST00000512293 GPR25O00155 361 aa22.33■■□□□ 1.17
PDLIM3-207ENST00000512293 GTF2IP78347 998 aa22.33■■□□□ 1.17
PDLIM3-207ENST00000512293 PTPN12Q05209 780 aaKnown RBP22.33■■□□□ 1.17
PDLIM3-207ENST00000512293 ANKRD18BA2A2Z9 1011 aa22.32■■□□□ 1.16
PDLIM3-207ENST00000512293 UNCXA6NJT0 531 aa22.32■■□□□ 1.16
PDLIM3-207ENST00000512293 KCNJ4P48050 445 aa22.32■■□□□ 1.16
PDLIM3-207ENST00000512293 FKBP5Q13451 457 aaPredicted RBP22.32■■□□□ 1.16
PDLIM3-207ENST00000512293 MAP3K11Q16584 847 aa22.32■■□□□ 1.16
PDLIM3-207ENST00000512293 PCDH10Q9P2E7 1040 aa22.32■■□□□ 1.16
PDLIM3-207ENST00000512293 PPP2R3BQ9Y5P8 575 aa22.32■■□□□ 1.16
PDLIM3-207ENST00000512293 FKBP1AP62942 108 aaKnown RBP22.31■■□□□ 1.16
PDLIM3-207ENST00000512293 SPRYD7Q5W111 196 aa22.31■■□□□ 1.16
PDLIM3-207ENST00000512293 ALDH1A1P00352 501 aa22.3■■□□□ 1.16
PDLIM3-207ENST00000512293 IL1R1P14778 569 aa22.3■■□□□ 1.16
PDLIM3-207ENST00000512293 INHBEP58166 350 aa22.3■■□□□ 1.16
PDLIM3-207ENST00000512293 DLGAP5Q15398 846 aa22.3■■□□□ 1.16
PDLIM3-207ENST00000512293 DEFB129Q9H1M3 183 aa22.3■■□□□ 1.16
PDLIM3-207ENST00000512293 FBXO46Q6PJ61 603 aaPredicted RBP22.29■■□□□ 1.16
PDLIM3-207ENST00000512293 FANCIQ9NVI1 1328 aa22.29■■□□□ 1.16
PDLIM3-207ENST00000512293 FKTNO75072 461 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms