RNA–Protein interactions for RNA: ENST00000511905.5

SPOCK3-219, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

TSL 2

Gene SPOCK3, Length 1,700 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-219ENST00000511905 ZSCAN25Q6NSZ9 544 aa24.34■■□□□ 1.49
SPOCK3-219ENST00000511905 NSUN7Q8NE18 718 aaKnown RBP24.34■■□□□ 1.49
SPOCK3-219ENST00000511905 RIC1Q4ADV7 1423 aa24.34■■□□□ 1.49
SPOCK3-219ENST00000511905 TTLL11Q8NHH1 800 aa24.33■■□□□ 1.49
SPOCK3-219ENST00000511905 OSBP2Q969R2 916 aa24.33■■□□□ 1.49
SPOCK3-219ENST00000511905 FAM89AQ96GI7 184 aa24.33■■□□□ 1.49
SPOCK3-219ENST00000511905 ANO8Q9HCE9 1232 aaPredicted RBP24.33■■□□□ 1.49
SPOCK3-219ENST00000511905 M0R2C6 588 aa24.32■■□□□ 1.48
SPOCK3-219ENST00000511905 JAK2O60674 1132 aa24.32■■□□□ 1.48
SPOCK3-219ENST00000511905 KDM4AO75164 1064 aa24.32■■□□□ 1.48
SPOCK3-219ENST00000511905 FERMT3Q86UX7 667 aa24.32■■□□□ 1.48
SPOCK3-219ENST00000511905 NAP1L5Q96NT1 182 aaPredicted RBP24.32■■□□□ 1.48
SPOCK3-219ENST00000511905 NUP62CLQ9H1M0 184 aa24.32■■□□□ 1.48
SPOCK3-219ENST00000511905 SALL1Q9NSC2 1324 aa24.32■■□□□ 1.48
SPOCK3-219ENST00000511905 ANKRD18BA2A2Z9 1011 aa24.32■■□□□ 1.48
SPOCK3-219ENST00000511905 H3BQV1 296 aa24.32■■□□□ 1.48
SPOCK3-219ENST00000511905 IL6STP40189 918 aaPredicted RBP24.32■■□□□ 1.48
SPOCK3-219ENST00000511905 CTSWP56202 376 aa24.32■■□□□ 1.48
SPOCK3-219ENST00000511905 TTF1Q15361 905 aaPredicted RBP24.32■■□□□ 1.48
SPOCK3-219ENST00000511905 MAP3K11Q16584 847 aa24.32■■□□□ 1.48
SPOCK3-219ENST00000511905 IFFO2Q5TF58 517 aa24.32■■□□□ 1.48
SPOCK3-219ENST00000511905 CDCA7Q9BWT1 371 aaPredicted RBP24.32■■□□□ 1.48
SPOCK3-219ENST00000511905 GOLGA6L4A6NEF3 574 aa24.31■■□□□ 1.48
SPOCK3-219ENST00000511905 HCLS1P14317 486 aaPredicted RBP24.31■■□□□ 1.48
SPOCK3-219ENST00000511905 ATP2B3Q16720 1220 aa24.31■■□□□ 1.48
SPOCK3-219ENST00000511905 IMMTQ16891 758 aaKnown RBP24.31■■□□□ 1.48
SPOCK3-219ENST00000511905 GIMAP6Q6P9H5 292 aa24.31■■□□□ 1.48
SPOCK3-219ENST00000511905 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.31■■□□□ 1.48
SPOCK3-219ENST00000511905 ATRNO75882 1429 aa24.3■■□□□ 1.48
SPOCK3-219ENST00000511905 TPM2P07951 284 aa24.3■■□□□ 1.48
SPOCK3-219ENST00000511905 FKBP4Q02790 459 aaKnown RBP eCLIP24.3■■□□□ 1.48
SPOCK3-219ENST00000511905 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.3■■□□□ 1.48
SPOCK3-219ENST00000511905 WNK3Q9BYP7 1800 aa24.3■■□□□ 1.48
SPOCK3-219ENST00000511905 PDE8AO60658 829 aa24.3■■□□□ 1.48
SPOCK3-219ENST00000511905 ADORA1P30542 326 aa24.3■■□□□ 1.48
SPOCK3-219ENST00000511905 CCDC9Q9Y3X0 531 aaKnown RBP24.3■■□□□ 1.48
SPOCK3-219ENST00000511905 AHDC1Q5TGY3 1603 aaPredicted RBP24.29■■□□□ 1.48
SPOCK3-219ENST00000511905 MYH3P11055 1940 aa24.29■■□□□ 1.48
SPOCK3-219ENST00000511905 EXOC5O00471 708 aa24.29■■□□□ 1.48
SPOCK3-219ENST00000511905 CTDNEP1O95476 244 aa24.29■■□□□ 1.48
SPOCK3-219ENST00000511905 CAVIN2O95810 425 aa24.29■■□□□ 1.48
SPOCK3-219ENST00000511905 ITGA6P23229 1130 aa24.29■■□□□ 1.48
SPOCK3-219ENST00000511905 PDIA3P30101 505 aaKnown RBP24.29■■□□□ 1.48
SPOCK3-219ENST00000511905 METTL24Q5JXM2 366 aa24.29■■□□□ 1.48
SPOCK3-219ENST00000511905 VGLL2Q8N8G2 317 aa24.29■■□□□ 1.48
SPOCK3-219ENST00000511905 CLSTN2Q9H4D0 955 aa24.29■■□□□ 1.48
SPOCK3-219ENST00000511905 LRP5O75197 1615 aa24.29■■□□□ 1.48
SPOCK3-219ENST00000511905 KDM4FA0A1W2PPD8 638 aa24.28■■□□□ 1.48
SPOCK3-219ENST00000511905 HLFQ16534 295 aa24.28■■□□□ 1.48
SPOCK3-219ENST00000511905 LDHAL6AQ6ZMR3 332 aa24.28■■□□□ 1.48
SPOCK3-219ENST00000511905 RCOR1Q9UKL0 485 aa24.28■■□□□ 1.48
SPOCK3-219ENST00000511905 PTPDC1A2A3K4 754 aa24.27■■□□□ 1.48
SPOCK3-219ENST00000511905 TPM3P06753 285 aa24.27■■□□□ 1.48
SPOCK3-219ENST00000511905 LIG1P18858 919 aa24.27■■□□□ 1.48
SPOCK3-219ENST00000511905 APOBRQ0VD83 1088 aa24.27■■□□□ 1.48
SPOCK3-219ENST00000511905 ZNF34Q8IZ26 560 aa24.27■■□□□ 1.48
SPOCK3-219ENST00000511905 SLC4A9Q96Q91 983 aa24.27■■□□□ 1.48
SPOCK3-219ENST00000511905 MYH7P12883 1935 aa24.27■■□□□ 1.48
SPOCK3-219ENST00000511905 IRS4O14654 1257 aaPredicted RBP24.27■■□□□ 1.48
SPOCK3-219ENST00000511905 FOXP2O15409 715 aa24.27■■□□□ 1.48
SPOCK3-219ENST00000511905 PTMAP06454 111 aaKnown RBP24.27■■□□□ 1.48
SPOCK3-219ENST00000511905 UQCRFS1P1P0C7P4 283 aa24.27■■□□□ 1.48
SPOCK3-219ENST00000511905 ZAP70P43403 619 aa24.27■■□□□ 1.48
SPOCK3-219ENST00000511905 FAM200AQ8TCP9 573 aa24.27■■□□□ 1.48
SPOCK3-219ENST00000511905 ZNF396Q96N95 335 aaPredicted RBP24.27■■□□□ 1.48
SPOCK3-219ENST00000511905 DHX16O60231 1041 aaKnown RBP24.26■■□□□ 1.47
SPOCK3-219ENST00000511905 ADCY5O95622 1261 aa24.26■■□□□ 1.47
SPOCK3-219ENST00000511905 UBE3CQ15386 1083 aa24.26■■□□□ 1.47
SPOCK3-219ENST00000511905 SLFNL1Q499Z3 407 aa24.26■■□□□ 1.47
SPOCK3-219ENST00000511905 FAM173BQ6P4H8 233 aa24.26■■□□□ 1.47
SPOCK3-219ENST00000511905 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.26■■□□□ 1.47
SPOCK3-219ENST00000511905 USP25Q9UHP3 1055 aa24.26■■□□□ 1.47
SPOCK3-219ENST00000511905 ZNF330Q9Y3S2 320 aaPredicted RBP24.26■■□□□ 1.47
SPOCK3-219ENST00000511905 NWD2Q9ULI1 1742 aa24.26■■□□□ 1.47
SPOCK3-219ENST00000511905 CICQ96RK0 1608 aaPredicted RBP24.25■■□□□ 1.47
SPOCK3-219ENST00000511905 FGAP02671 866 aa24.25■■□□□ 1.47
SPOCK3-219ENST00000511905 ARID4AP29374 1257 aaPredicted RBP24.25■■□□□ 1.47
SPOCK3-219ENST00000511905 ADD1P35611 737 aaKnown RBP24.25■■□□□ 1.47
SPOCK3-219ENST00000511905 WASHC4Q2M389 1173 aa24.25■■□□□ 1.47
SPOCK3-219ENST00000511905 LRRC2Q9BYS8 371 aa24.25■■□□□ 1.47
SPOCK3-219ENST00000511905 TNMDQ9H2S6 317 aa24.25■■□□□ 1.47
SPOCK3-219ENST00000511905 GREM2Q9H772 168 aa24.25■■□□□ 1.47
SPOCK3-219ENST00000511905 TFIP11Q9UBB9 837 aaKnown RBP24.25■■□□□ 1.47
SPOCK3-219ENST00000511905 NUP98P52948 1817 aa24.25■■□□□ 1.47
SPOCK3-219ENST00000511905 MYH15Q9Y2K3 1946 aa24.25■■□□□ 1.47
SPOCK3-219ENST00000511905 COL16A1Q07092 1604 aaPredicted RBP24.25■■□□□ 1.47
SPOCK3-219ENST00000511905 MROH5Q6ZUA9 1318 aa24.25■■□□□ 1.47
SPOCK3-219ENST00000511905 DDX60Q8IY21 1712 aaKnown RBP24.25■■□□□ 1.47
SPOCK3-219ENST00000511905 PDE8BO95263 885 aa24.24■■□□□ 1.47
SPOCK3-219ENST00000511905 ADD2P35612 726 aa24.24■■□□□ 1.47
SPOCK3-219ENST00000511905 SCARF1Q14162 830 aa24.24■■□□□ 1.47
SPOCK3-219ENST00000511905 MB21D2Q8IYB1 491 aaPredicted RBP24.24■■□□□ 1.47
SPOCK3-219ENST00000511905 PGBD1Q96JS3 809 aa24.24■■□□□ 1.47
SPOCK3-219ENST00000511905 DACT1Q9NYF0 836 aa24.24■■□□□ 1.47
SPOCK3-219ENST00000511905 THRAP3Q9Y2W1 955 aaKnown RBP24.24■■□□□ 1.47
SPOCK3-219ENST00000511905 AKAP11Q9UKA4 1901 aa24.24■■□□□ 1.47
SPOCK3-219ENST00000511905 CTAGE5O15320 804 aa24.24■■□□□ 1.47
SPOCK3-219ENST00000511905 NCOA7Q8NI08 942 aa24.24■■□□□ 1.47
SPOCK3-219ENST00000511905 CNNM1Q9NRU3 951 aa24.24■■□□□ 1.47
SPOCK3-219ENST00000511905 TRMT112Q9UI30 125 aaKnown RBP24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms