RNA–Protein interactions for RNA: ENST00000511892.5

RNF4-217, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-217ENST00000511892 FLIIQ13045 1269 aa7.46□□□□□ -1.22
RNF4-217ENST00000511892 CCDC152Q4G0S7 254 aa7.46□□□□□ -1.22
RNF4-217ENST00000511892 PNMA8AQ86V59 439 aaPredicted RBP7.46□□□□□ -1.22
RNF4-217ENST00000511892 ZNF710Q8N1W2 664 aa7.46□□□□□ -1.22
RNF4-217ENST00000511892 GPR101Q96P66 508 aaPredicted RBP7.46□□□□□ -1.22
RNF4-217ENST00000511892 GPRC5DQ9NZD1 345 aa7.46□□□□□ -1.22
RNF4-217ENST00000511892 NSFL1CQ9UNZ2 370 aaKnown RBP7.46□□□□□ -1.22
RNF4-217ENST00000511892 RIMBP2O15034 1052 aa7.45□□□□□ -1.22
RNF4-217ENST00000511892 RAD17O75943 681 aa7.45□□□□□ -1.22
RNF4-217ENST00000511892 LMOD1P29536 600 aaPredicted RBP7.45□□□□□ -1.22
RNF4-217ENST00000511892 GMPSP49915 693 aaPredicted RBP7.45□□□□□ -1.22
RNF4-217ENST00000511892 CASP7P55210 303 aa7.45□□□□□ -1.22
RNF4-217ENST00000511892 CTSWP56202 376 aa7.45□□□□□ -1.22
RNF4-217ENST00000511892 NEXNQ0ZGT2 675 aa7.45□□□□□ -1.22
RNF4-217ENST00000511892 FKBP5Q13451 457 aaPredicted RBP7.45□□□□□ -1.22
RNF4-217ENST00000511892 GCKRQ14397 625 aa7.45□□□□□ -1.22
RNF4-217ENST00000511892 MAP1SQ66K74 1059 aaPredicted RBP7.45□□□□□ -1.22
RNF4-217ENST00000511892 CNTROBQ8N137 903 aa7.45□□□□□ -1.22
RNF4-217ENST00000511892 EFCAB3Q8N7B9 438 aa7.45□□□□□ -1.22
RNF4-217ENST00000511892 TTLL11Q8NHH1 800 aa7.45□□□□□ -1.22
RNF4-217ENST00000511892 TBC1D16Q8TBP0 767 aa7.45□□□□□ -1.22
RNF4-217ENST00000511892 DNAAF4Q8WXU2 420 aa7.45□□□□□ -1.22
RNF4-217ENST00000511892 DBNDD1Q9H9R9 158 aa7.45□□□□□ -1.22
RNF4-217ENST00000511892 PODXL2Q9NZ53 605 aa7.45□□□□□ -1.22
RNF4-217ENST00000511892 RTL9Q8NET4 1388 aa7.45□□□□□ -1.22
RNF4-217ENST00000511892 SHTN1A0MZ66 631 aa7.44□□□□□ -1.22
RNF4-217ENST00000511892 WTIPA6NIX2 430 aaPredicted RBP7.44□□□□□ -1.22
RNF4-217ENST00000511892 F6X3S4 739 aa7.44□□□□□ -1.22
RNF4-217ENST00000511892 C6orf229H3BNL8 230 aa7.44□□□□□ -1.22
RNF4-217ENST00000511892 HSP90B1P14625 803 aaKnown RBP7.44□□□□□ -1.22
RNF4-217ENST00000511892 HOXB3P14651 431 aaPredicted RBP7.44□□□□□ -1.22
RNF4-217ENST00000511892 FMR1Q06787 632 aaKnown RBP eCLIP7.44□□□□□ -1.22
RNF4-217ENST00000511892 DOK7Q18PE1 504 aa7.44□□□□□ -1.22
RNF4-217ENST00000511892 WASHC4Q2M389 1173 aa7.44□□□□□ -1.22
RNF4-217ENST00000511892 CIAPIN1Q6FI81 312 aa7.44□□□□□ -1.22
RNF4-217ENST00000511892 USP50Q70EL3 339 aaPredicted RBP7.44□□□□□ -1.22
RNF4-217ENST00000511892 UBE3BQ7Z3V4 1068 aa7.44□□□□□ -1.22
RNF4-217ENST00000511892 MYH16Q9H6N6 1097 aa7.44□□□□□ -1.22
RNF4-217ENST00000511892 GREM2Q9H772 168 aa7.44□□□□□ -1.22
RNF4-217ENST00000511892 KCNQ5Q9NR82 932 aa7.44□□□□□ -1.22
RNF4-217ENST00000511892 TMEM88BA6NKF7 163 aa7.43□□□□□ -1.22
RNF4-217ENST00000511892 PSMD14O00487 310 aa7.43□□□□□ -1.22
RNF4-217ENST00000511892 UFL1O94874 794 aa7.43□□□□□ -1.22
RNF4-217ENST00000511892 CSF1RP07333 972 aa7.43□□□□□ -1.22
RNF4-217ENST00000511892 HIRAP54198 1017 aaPredicted RBP7.43□□□□□ -1.22
RNF4-217ENST00000511892 TNIP1Q15025 636 aa7.43□□□□□ -1.22
RNF4-217ENST00000511892 BEND3Q5T5X7 828 aa7.43□□□□□ -1.22
RNF4-217ENST00000511892 ANKRD18AQ8IVF6 992 aa7.43□□□□□ -1.22
RNF4-217ENST00000511892 LINS1Q8NG48 757 aa7.43□□□□□ -1.22
RNF4-217ENST00000511892 EYA3Q99504 573 aa7.43□□□□□ -1.22
RNF4-217ENST00000511892 PLA2G12BQ9BX93 195 aa7.43□□□□□ -1.22
RNF4-217ENST00000511892 ADARB2Q9NS39 739 aaKnown RBP7.43□□□□□ -1.22
RNF4-217ENST00000511892 ANKIB1Q9P2G1 1089 aa7.43□□□□□ -1.22
RNF4-217ENST00000511892 MKRN1Q9UHC7 482 aaKnown RBP7.43□□□□□ -1.22
RNF4-217ENST00000511892 CNOT7Q9UIV1 285 aaKnown RBP7.43□□□□□ -1.22
RNF4-217ENST00000511892 GGA1Q9UJY5 639 aa7.43□□□□□ -1.22
RNF4-217ENST00000511892 ECE2O60344 883 aa7.42□□□□□ -1.22
RNF4-217ENST00000511892 FAM161AQ3B820 660 aa7.42□□□□□ -1.22
RNF4-217ENST00000511892 TRPM4Q8TD43 1214 aa7.42□□□□□ -1.22
RNF4-217ENST00000511892 CDC5LQ99459 802 aaKnown RBP7.42□□□□□ -1.22
RNF4-217ENST00000511892 BCL2L13Q9BXK5 485 aa7.42□□□□□ -1.22
RNF4-217ENST00000511892 ZC3H12CQ9C0D7 883 aaKnown RBP7.42□□□□□ -1.22
RNF4-217ENST00000511892 BSDC1Q9NW68 430 aaPredicted RBP7.42□□□□□ -1.22
RNF4-217ENST00000511892 PGAP2Q9UHJ9 254 aa7.42□□□□□ -1.22
RNF4-217ENST00000511892 MINPP1Q9UNW1 487 aa7.42□□□□□ -1.22
RNF4-217ENST00000511892 XDHP47989 1333 aa7.42□□□□□ -1.22
RNF4-217ENST00000511892 CNTNAP1P78357 1384 aa7.42□□□□□ -1.22
RNF4-217ENST00000511892 THSD7BQ9C0I4 1608 aa7.41□□□□□ -1.22
RNF4-217ENST00000511892 TRAF5O00463 557 aa7.41□□□□□ -1.22
RNF4-217ENST00000511892 EGFRP00533 1210 aa7.41□□□□□ -1.22
RNF4-217ENST00000511892 VIL1P09327 827 aaKnown RBP7.41□□□□□ -1.22
RNF4-217ENST00000511892 ITGA6P23229 1130 aa7.41□□□□□ -1.22
RNF4-217ENST00000511892 ATP2B4P23634 1241 aa7.41□□□□□ -1.22
RNF4-217ENST00000511892 FOXO4P98177 505 aa7.41□□□□□ -1.22
RNF4-217ENST00000511892 EPHA10Q5JZY3 1008 aa7.41□□□□□ -1.22
RNF4-217ENST00000511892 CST9Q5W186 159 aa7.41□□□□□ -1.22
RNF4-217ENST00000511892 SAMD7Q7Z3H4 446 aa7.41□□□□□ -1.22
RNF4-217ENST00000511892 MICALL2Q8IY33 904 aa7.41□□□□□ -1.22
RNF4-217ENST00000511892 MRPL50Q8N5N7 158 aaKnown RBP7.41□□□□□ -1.22
RNF4-217ENST00000511892 DPF2Q92785 391 aa7.41□□□□□ -1.22
RNF4-217ENST00000511892 CDCA7LQ96GN5 454 aa7.41□□□□□ -1.22
RNF4-217ENST00000511892 ECM29Q5VYK3 1845 aa7.41□□□□□ -1.22
RNF4-217ENST00000511892 RASSF10A6NK89 507 aa7.4□□□□□ -1.22
RNF4-217ENST00000511892 E9PSI1 815 aa7.4□□□□□ -1.22
RNF4-217ENST00000511892 H7C1D1 291 aa7.4□□□□□ -1.22
RNF4-217ENST00000511892 VEGFBP49765 207 aa7.4□□□□□ -1.22
RNF4-217ENST00000511892 CCT4P50991 539 aaKnown RBP7.4□□□□□ -1.22
RNF4-217ENST00000511892 SLFN5Q08AF3 891 aa7.4□□□□□ -1.22
RNF4-217ENST00000511892 TRMT2AQ8IZ69 625 aaKnown RBP7.4□□□□□ -1.22
RNF4-217ENST00000511892 ZC3H15Q8WU90 426 aaKnown RBP7.4□□□□□ -1.22
RNF4-217ENST00000511892 GLIS2Q9BZE0 524 aaPredicted RBP7.4□□□□□ -1.22
RNF4-217ENST00000511892 ZNF609O15014 1411 aa7.4□□□□□ -1.22
RNF4-217ENST00000511892 MED23Q9ULK4 1368 aa7.39□□□□□ -1.23
RNF4-217ENST00000511892 IRS2Q9Y4H2 1338 aa7.39□□□□□ -1.23
RNF4-217ENST00000511892 GRM8O00222 908 aa7.39□□□□□ -1.23
RNF4-217ENST00000511892 HSPA1AP0DMV8 641 aaKnown RBP7.39□□□□□ -1.23
RNF4-217ENST00000511892 HSPA1BP0DMV9 641 aaKnown RBP7.39□□□□□ -1.23
RNF4-217ENST00000511892 RPS12P25398 132 aaKnown RBP7.39□□□□□ -1.23
RNF4-217ENST00000511892 KLRK1P26718 216 aa7.39□□□□□ -1.23
RNF4-217ENST00000511892 IGHMBP2P38935 993 aaKnown RBP7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms