RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 PDE8AO60658 829 aa24.73■■□□□ 1.55
HMGCS1-206ENST00000511774 SASH1O94885 1247 aa24.73■■□□□ 1.55
HMGCS1-206ENST00000511774 ATP2B4P23634 1241 aa24.72■■□□□ 1.55
HMGCS1-206ENST00000511774 HABP4Q5JVS0 413 aaKnown RBP24.72■■□□□ 1.55
HMGCS1-206ENST00000511774 TXNRD3Q86VQ6 643 aa24.71■■□□□ 1.55
HMGCS1-206ENST00000511774 ANKRD18AQ8IVF6 992 aa24.71■■□□□ 1.55
HMGCS1-206ENST00000511774 MBIPQ9NS73 344 aa24.71■■□□□ 1.55
HMGCS1-206ENST00000511774 MED23Q9ULK4 1368 aa24.7■■□□□ 1.55
HMGCS1-206ENST00000511774 LDLRAD1Q5T700 205 aa24.7■■□□□ 1.54
HMGCS1-206ENST00000511774 SPRYD7Q5W111 196 aa24.7■■□□□ 1.54
HMGCS1-206ENST00000511774 CCDC191Q8NCU4 936 aa24.7■■□□□ 1.54
HMGCS1-206ENST00000511774 MYH3P11055 1940 aa24.7■■□□□ 1.54
HMGCS1-206ENST00000511774 GOLGA2Q08379 1002 aa24.69■■□□□ 1.54
HMGCS1-206ENST00000511774 SREBF2Q12772 1141 aa24.69■■□□□ 1.54
HMGCS1-206ENST00000511774 MINPP1Q9UNW1 487 aa24.69■■□□□ 1.54
HMGCS1-206ENST00000511774 LAMB1P07942 1786 aa24.69■■□□□ 1.54
HMGCS1-206ENST00000511774 RBBP6Q7Z6E9 1792 aaKnown RBP24.69■■□□□ 1.54
HMGCS1-206ENST00000511774 ZBED3Q96IU2 234 aaPredicted RBP24.68■■□□□ 1.54
HMGCS1-206ENST00000511774 CEP290O15078 2479 aa24.68■■□□□ 1.54
HMGCS1-206ENST00000511774 SSC5DA1L4H1 1573 aa24.67■■□□□ 1.54
HMGCS1-206ENST00000511774 KLRK1P26718 216 aa24.67■■□□□ 1.54
HMGCS1-206ENST00000511774 OTOP1Q7RTM1 612 aa24.67■■□□□ 1.54
HMGCS1-206ENST00000511774 FBXW7Q969H0 707 aa24.67■■□□□ 1.54
HMGCS1-206ENST00000511774 CWC25Q9NXE8 425 aaPredicted RBP24.67■■□□□ 1.54
HMGCS1-206ENST00000511774 NF2P35240 595 aa24.66■■□□□ 1.54
HMGCS1-206ENST00000511774 CAP1Q01518 475 aa24.66■■□□□ 1.54
HMGCS1-206ENST00000511774 STRIP1Q5VSL9 837 aa24.66■■□□□ 1.54
HMGCS1-206ENST00000511774 RUNDC1Q96C34 613 aa24.66■■□□□ 1.54
HMGCS1-206ENST00000511774 GCC1Q96CN9 775 aa24.66■■□□□ 1.54
HMGCS1-206ENST00000511774 ANGEL1Q9UNK9 670 aaKnown RBP24.66■■□□□ 1.54
HMGCS1-206ENST00000511774 TRIM17Q9Y577 477 aa24.66■■□□□ 1.54
HMGCS1-206ENST00000511774 IGF2BP3O00425 579 aaKnown RBP eCLIP24.65■■□□□ 1.54
HMGCS1-206ENST00000511774 ELL2O00472 640 aaPredicted RBP24.65■■□□□ 1.54
HMGCS1-206ENST00000511774 ZNF853P0CG23 659 aa24.65■■□□□ 1.54
HMGCS1-206ENST00000511774 HSP90B1P14625 803 aaKnown RBP24.65■■□□□ 1.54
HMGCS1-206ENST00000511774 CCT4P50991 539 aaKnown RBP24.65■■□□□ 1.54
HMGCS1-206ENST00000511774 CTSWP56202 376 aa24.65■■□□□ 1.54
HMGCS1-206ENST00000511774 ARMC9Q7Z3E5 817 aa24.65■■□□□ 1.54
HMGCS1-206ENST00000511774 OGFOD1Q8N543 542 aa24.65■■□□□ 1.54
HMGCS1-206ENST00000511774 CLMNQ96JQ2 1002 aa24.65■■□□□ 1.54
HMGCS1-206ENST00000511774 METTL22Q9BUU2 404 aaPredicted RBP24.65■■□□□ 1.54
HMGCS1-206ENST00000511774 GREM2Q9H772 168 aa24.65■■□□□ 1.54
HMGCS1-206ENST00000511774 IFNL1Q8IU54 200 aa24.64■■□□□ 1.54
HMGCS1-206ENST00000511774 TTLL11Q8NHH1 800 aa24.64■■□□□ 1.54
HMGCS1-206ENST00000511774 BSDC1Q9NW68 430 aaPredicted RBP24.64■■□□□ 1.54
HMGCS1-206ENST00000511774 KIAA0825Q8IV33 1275 aa24.63■■□□□ 1.53
HMGCS1-206ENST00000511774 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.63■■□□□ 1.53
HMGCS1-206ENST00000511774 PCDHAC2Q9Y5I4 1007 aa24.63■■□□□ 1.53
HMGCS1-206ENST00000511774 IGKV5-2P06315 115 aa24.62■■□□□ 1.53
HMGCS1-206ENST00000511774 CDC5LQ99459 802 aaKnown RBP24.62■■□□□ 1.53
HMGCS1-206ENST00000511774 COA1Q9GZY4 146 aa24.62■■□□□ 1.53
HMGCS1-206ENST00000511774 MYO3BQ8WXR4 1341 aa24.61■■□□□ 1.53
HMGCS1-206ENST00000511774 APOBEC3FQ8IUX4 373 aaKnown RBP24.61■■□□□ 1.53
HMGCS1-206ENST00000511774 SZT2Q5T011 3432 aa24.61■■□□□ 1.53
HMGCS1-206ENST00000511774 ECM29Q5VYK3 1845 aa24.61■■□□□ 1.53
HMGCS1-206ENST00000511774 RALBP1Q15311 655 aa24.6■■□□□ 1.53
HMGCS1-206ENST00000511774 TTLL5Q6EMB2 1281 aa24.6■■□□□ 1.53
HMGCS1-206ENST00000511774 C8orf58Q8NAV2 365 aa24.6■■□□□ 1.53
HMGCS1-206ENST00000511774 WNK4Q96J92 1243 aa24.6■■□□□ 1.53
HMGCS1-206ENST00000511774 ADAMTS8Q9UP79 889 aa24.6■■□□□ 1.53
HMGCS1-206ENST00000511774 TRIOBPQ9H2D6 2365 aa24.6■■□□□ 1.53
HMGCS1-206ENST00000511774 AOX1Q06278 1338 aa24.6■■□□□ 1.53
HMGCS1-206ENST00000511774 MANSC4A6NHS7 340 aaPredicted RBP24.59■■□□□ 1.53
HMGCS1-206ENST00000511774 ALDH1A1P00352 501 aa24.59■■□□□ 1.53
HMGCS1-206ENST00000511774 EN2P19622 333 aaPredicted RBP24.59■■□□□ 1.53
HMGCS1-206ENST00000511774 GJA5P36382 358 aa24.59■■□□□ 1.53
HMGCS1-206ENST00000511774 FXR1P51114 621 aaKnown RBP eCLIP24.59■■□□□ 1.531e-7■■■■□ 22.5
HMGCS1-206ENST00000511774 CD99L2Q8TCZ2 262 aa24.59■■□□□ 1.53
HMGCS1-206ENST00000511774 DEFB129Q9H1M3 183 aa24.59■■□□□ 1.53
HMGCS1-206ENST00000511774 MAP3K2Q9Y2U5 619 aa24.59■■□□□ 1.53
HMGCS1-206ENST00000511774 MAP3K11Q16584 847 aa24.58■■□□□ 1.53
HMGCS1-206ENST00000511774 CERS5Q8N5B7 392 aa24.58■■□□□ 1.53
HMGCS1-206ENST00000511774 SLC10A4Q96EP9 437 aa24.58■■□□□ 1.53
HMGCS1-206ENST00000511774 PTPN22Q9Y2R2 807 aa24.58■■□□□ 1.53
HMGCS1-206ENST00000511774 OTOFQ9HC10 1997 aa24.57■■□□□ 1.52
HMGCS1-206ENST00000511774 GTF2IP78347 998 aa24.57■■□□□ 1.52
HMGCS1-206ENST00000511774 CRHR2Q13324 411 aa24.56■■□□□ 1.52
HMGCS1-206ENST00000511774 INTS3Q68E01 1043 aaKnown RBP24.56■■□□□ 1.52
HMGCS1-206ENST00000511774 COL1A1P02452 1464 aaPredicted RBP24.56■■□□□ 1.52
HMGCS1-206ENST00000511774 SNAP23O00161 211 aa24.55■■□□□ 1.52
HMGCS1-206ENST00000511774 ZBTB48P10074 688 aaPredicted RBP24.55■■□□□ 1.52
HMGCS1-206ENST00000511774 CWF19L2Q2TBE0 894 aaKnown RBP24.55■■□□□ 1.52
HMGCS1-206ENST00000511774 ARMC5Q96C12 935 aa24.55■■□□□ 1.52
HMGCS1-206ENST00000511774 PTPN18Q99952 460 aa24.55■■□□□ 1.52
HMGCS1-206ENST00000511774 LEMD3Q9Y2U8 911 aa24.55■■□□□ 1.52
HMGCS1-206ENST00000511774 ZNF804BA4D1E1 1349 aa24.55■■□□□ 1.52
HMGCS1-206ENST00000511774 IRS2Q9Y4H2 1338 aa24.55■■□□□ 1.52
HMGCS1-206ENST00000511774 PI4KAP2A4QPH2 592 aa24.54■■□□□ 1.52
HMGCS1-206ENST00000511774 INHBEP58166 350 aa24.54■■□□□ 1.52
HMGCS1-206ENST00000511774 PI4KAP1Q8N8J0 262 aa24.54■■□□□ 1.52
HMGCS1-206ENST00000511774 MYBBP1AQ9BQG0 1328 aaKnown RBP24.54■■□□□ 1.52
HMGCS1-206ENST00000511774 A0A1B0GUL6 1792 aa24.54■■□□□ 1.52
HMGCS1-206ENST00000511774 MMP14P50281 582 aa24.53■■□□□ 1.52
HMGCS1-206ENST00000511774 TSPYL6Q8N831 410 aa24.53■■□□□ 1.52
HMGCS1-206ENST00000511774 IFT57Q9NWB7 429 aa24.53■■□□□ 1.52
HMGCS1-206ENST00000511774 CLRN2A0PK11 232 aa24.52■■□□□ 1.52
HMGCS1-206ENST00000511774 WDR43Q15061 677 aaKnown RBP eCLIP24.52■■□□□ 1.52
HMGCS1-206ENST00000511774 NBPF12Q5TAG4 269 aaPredicted RBP24.52■■□□□ 1.52
HMGCS1-206ENST00000511774 KSR2Q6VAB6 950 aa24.52■■□□□ 1.52
HMGCS1-206ENST00000511774 ERO1AQ96HE7 468 aa24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms