RNA–Protein interactions for RNA: ENST00000511498.1

IFT122-223, Transcript of intraflagellar transport 122, human

TSL 4

Gene IFT122, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IFT122-223	ENST00000511498	UPF3B	Q9BZI7	483 aa	Known RBP	11.24	□□□□□ -0.61
IFT122-223	ENST00000511498	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	11.24	□□□□□ -0.61
IFT122-223	ENST00000511498	ZSWIM6	Q9HCJ5	1215 aa		11.24	□□□□□ -0.61
IFT122-223	ENST00000511498	LIMCH1	Q9UPQ0	1083 aa		11.24	□□□□□ -0.61
IFT122-223	ENST00000511498		U3KPZ7	1027 aa	Predicted RBP	11.24	□□□□□ -0.61
IFT122-223	ENST00000511498	KIAA1551	Q9HCM1	1747 aa		11.23	□□□□□ -0.61
IFT122-223	ENST00000511498	LAMA4	Q16363	1823 aa		11.23	□□□□□ -0.61
IFT122-223	ENST00000511498	KAT6B	Q8WYB5	2073 aa		11.23	□□□□□ -0.61
IFT122-223	ENST00000511498		A0A1B0GUL7	405 aa		11.23	□□□□□ -0.61
IFT122-223	ENST00000511498	ANKRD18B	A2A2Z9	1011 aa		11.23	□□□□□ -0.61
IFT122-223	ENST00000511498	PDE8A	O60658	829 aa		11.23	□□□□□ -0.61
IFT122-223	ENST00000511498	CAST	P20810	708 aa	Known RBP	11.23	□□□□□ -0.61
IFT122-223	ENST00000511498	PTH1R	Q03431	593 aa		11.23	□□□□□ -0.61
IFT122-223	ENST00000511498	CCDC158	Q5M9N0	1113 aa		11.23	□□□□□ -0.61
IFT122-223	ENST00000511498	USPL1	Q5W0Q7	1092 aa		11.23	□□□□□ -0.61
IFT122-223	ENST00000511498	CREB3L3	Q68CJ9	461 aa		11.23	□□□□□ -0.61
IFT122-223	ENST00000511498	MSL1	Q68DK7	614 aa		11.23	□□□□□ -0.61
IFT122-223	ENST00000511498	PRPF40B	Q6NWY9	871 aa	Known RBP	11.23	□□□□□ -0.61
IFT122-223	ENST00000511498	ZGPAT	Q8N5A5	531 aa	Known RBP	11.23	□□□□□ -0.61
IFT122-223	ENST00000511498	FAM227B	Q96M60	508 aa		11.23	□□□□□ -0.61
IFT122-223	ENST00000511498	DNAJC2	Q99543	621 aa	Known RBP	11.23	□□□□□ -0.61
IFT122-223	ENST00000511498	HELLS	Q9NRZ9	838 aa		11.23	□□□□□ -0.61
IFT122-223	ENST00000511498	PAG1	Q9NWQ8	432 aa		11.23	□□□□□ -0.61
IFT122-223	ENST00000511498		A0A1B0GUL6	1792 aa		11.23	□□□□□ -0.61
IFT122-223	ENST00000511498	DOCK2	Q92608	1830 aa		11.23	□□□□□ -0.61
IFT122-223	ENST00000511498	SLC27A2	O14975	620 aa		11.22	□□□□□ -0.61
IFT122-223	ENST00000511498	FOXN1	O15353	648 aa		11.22	□□□□□ -0.61
IFT122-223	ENST00000511498	ZFY	P08048	801 aa	Predicted RBP	11.22	□□□□□ -0.61
IFT122-223	ENST00000511498	IFIT1	P09914	478 aa	Known RBP	11.22	□□□□□ -0.61
IFT122-223	ENST00000511498	AK2	P54819	239 aa		11.22	□□□□□ -0.61
IFT122-223	ENST00000511498	EIF5	P55010	431 aa	Known RBP	11.22	□□□□□ -0.61
IFT122-223	ENST00000511498	MCMDC2	Q4G0Z9	681 aa		11.22	□□□□□ -0.61
IFT122-223	ENST00000511498	RUFY3	Q7L099	469 aa		11.22	□□□□□ -0.61
IFT122-223	ENST00000511498	ZNF34	Q8IZ26	560 aa		11.22	□□□□□ -0.61
IFT122-223	ENST00000511498	RASEF	Q8IZ41	740 aa		11.22	□□□□□ -0.61
IFT122-223	ENST00000511498	SMC1B	Q8NDV3	1235 aa		11.22	□□□□□ -0.61
IFT122-223	ENST00000511498	RTL9	Q8NET4	1388 aa		11.22	□□□□□ -0.61
IFT122-223	ENST00000511498	JAKMIP1	Q96N16	626 aa	Known RBP	11.22	□□□□□ -0.61
IFT122-223	ENST00000511498	NEUROD6	Q96NK8	337 aa		11.22	□□□□□ -0.61
IFT122-223	ENST00000511498	WDR33	Q9C0J8	1336 aa	Known RBP	11.22	□□□□□ -0.61
IFT122-223	ENST00000511498	PDRG1	Q9NUG6	133 aa		11.22	□□□□□ -0.61
IFT122-223	ENST00000511498	MYH14	Q7Z406	1995 aa	Known RBP	11.21	□□□□□ -0.61
IFT122-223	ENST00000511498	LOC102724428	A0A0B4J2F2	783 aa		11.21	□□□□□ -0.61
IFT122-223	ENST00000511498	IRS4	O14654	1257 aa	Predicted RBP	11.21	□□□□□ -0.61
IFT122-223	ENST00000511498	TAF5L	O75529	589 aa		11.21	□□□□□ -0.61
IFT122-223	ENST00000511498	BRD1	O95696	1058 aa		11.21	□□□□□ -0.61
IFT122-223	ENST00000511498	ATP6V1A	P38606	617 aa		11.21	□□□□□ -0.61
IFT122-223	ENST00000511498	CRKL	P46109	303 aa	Known RBP	11.21	□□□□□ -0.61
IFT122-223	ENST00000511498	SIK1	P57059	783 aa		11.21	□□□□□ -0.61
IFT122-223	ENST00000511498	HLF	Q16534	295 aa		11.21	□□□□□ -0.61
IFT122-223	ENST00000511498	KLHL40	Q2TBA0	621 aa		11.21	□□□□□ -0.61
IFT122-223	ENST00000511498	LRRC24	Q50LG9	513 aa		11.21	□□□□□ -0.61
IFT122-223	ENST00000511498	TTC39A	Q5SRH9	613 aa		11.21	□□□□□ -0.61
IFT122-223	ENST00000511498	FAM89A	Q96GI7	184 aa		11.21	□□□□□ -0.61
IFT122-223	ENST00000511498	ZNF512B	Q96KM6	892 aa	Predicted RBP	11.21	□□□□□ -0.61
IFT122-223	ENST00000511498	DSCC1	Q9BVC3	393 aa		11.21	□□□□□ -0.61
IFT122-223	ENST00000511498	TRMT112	Q9UI30	125 aa	Known RBP	11.21	□□□□□ -0.61
IFT122-223	ENST00000511498	ZNF652	Q9Y2D9	606 aa		11.21	□□□□□ -0.61
IFT122-223	ENST00000511498	AKAP11	Q9UKA4	1901 aa		11.21	□□□□□ -0.62
IFT122-223	ENST00000511498	ITGA6	P23229	1130 aa		11.2	□□□□□ -0.62
IFT122-223	ENST00000511498	KCNQ4	P56696	695 aa		11.2	□□□□□ -0.62
IFT122-223	ENST00000511498	ZMYM1	Q5SVZ6	1142 aa		11.2	□□□□□ -0.62
IFT122-223	ENST00000511498	GORAB	Q5T7V8	394 aa		11.2	□□□□□ -0.62
IFT122-223	ENST00000511498	BLOC1S2	Q6QNY1	142 aa		11.2	□□□□□ -0.62
IFT122-223	ENST00000511498	TTLL11	Q8NHH1	800 aa		11.2	□□□□□ -0.62
IFT122-223	ENST00000511498	ZNF594	Q96JF6	807 aa	Predicted RBP	11.2	□□□□□ -0.62
IFT122-223	ENST00000511498	TAF1L	Q8IZX4	1826 aa		11.19	□□□□□ -0.62
IFT122-223	ENST00000511498	KIF13B	Q9NQT8	1826 aa		11.19	□□□□□ -0.62
IFT122-223	ENST00000511498	MROH5	Q6ZUA9	1318 aa		11.19	□□□□□ -0.62
IFT122-223	ENST00000511498	CNTNAP4	Q9C0A0	1308 aa		11.19	□□□□□ -0.62
IFT122-223	ENST00000511498	GOLGA6L3	A6NEY3	463 aa		11.19	□□□□□ -0.62
IFT122-223	ENST00000511498	GOLIM4	O00461	696 aa		11.19	□□□□□ -0.62
IFT122-223	ENST00000511498	HMGB1	P09429	215 aa	Known RBP	11.19	□□□□□ -0.62
IFT122-223	ENST00000511498	RPS6KB1	P23443	525 aa		11.19	□□□□□ -0.62
IFT122-223	ENST00000511498	GPT	P24298	496 aa		11.19	□□□□□ -0.62
IFT122-223	ENST00000511498	ATP2B3	Q16720	1220 aa		11.19	□□□□□ -0.62
IFT122-223	ENST00000511498	METTL24	Q5JXM2	366 aa		11.19	□□□□□ -0.62
IFT122-223	ENST00000511498	ZSCAN25	Q6NSZ9	544 aa		11.19	□□□□□ -0.62
IFT122-223	ENST00000511498	INTS5	Q6P9B9	1019 aa	Known RBP	11.19	□□□□□ -0.62
IFT122-223	ENST00000511498	NOL8	Q76FK4	1167 aa	Known RBP	11.19	□□□□□ -0.62
IFT122-223	ENST00000511498	DDX46	Q7L014	1031 aa	Known RBP	11.19	□□□□□ -0.62
IFT122-223	ENST00000511498	ZNF589	Q86UQ0	364 aa	Predicted RBP	11.19	□□□□□ -0.62
IFT122-223	ENST00000511498	SMC3	Q9UQE7	1217 aa		11.19	□□□□□ -0.62
IFT122-223	ENST00000511498	ATP6V1D	Q9Y5K8	247 aa		11.19	□□□□□ -0.62
IFT122-223	ENST00000511498	UBN2	Q6ZU65	1347 aa		11.18	□□□□□ -0.62
IFT122-223	ENST00000511498	FSD2	A1L4K1	749 aa		11.18	□□□□□ -0.62
IFT122-223	ENST00000511498	RNF113A	O15541	343 aa	Known RBP	11.18	□□□□□ -0.62
IFT122-223	ENST00000511498	MBD3	O95983	291 aa		11.18	□□□□□ -0.62
IFT122-223	ENST00000511498	TTF1	Q15361	905 aa	Predicted RBP	11.18	□□□□□ -0.62
IFT122-223	ENST00000511498	MCTP1	Q6DN14	999 aa		11.18	□□□□□ -0.62
IFT122-223	ENST00000511498	CLEC4G	Q6UXB4	293 aa		11.18	□□□□□ -0.62
IFT122-223	ENST00000511498	LDHAL6A	Q6ZMR3	332 aa		11.18	□□□□□ -0.62
IFT122-223	ENST00000511498	CHMP4C	Q96CF2	233 aa		11.18	□□□□□ -0.62
IFT122-223	ENST00000511498	XAGE2	Q96GT9	111 aa		11.18	□□□□□ -0.62
IFT122-223	ENST00000511498	UTP14A	Q9BVJ6	771 aa	Known RBP	11.18	□□□□□ -0.62
IFT122-223	ENST00000511498	PUS3	Q9BZE2	481 aa	Known RBP	11.18	□□□□□ -0.62
IFT122-223	ENST00000511498	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	11.18	□□□□□ -0.62
IFT122-223	ENST00000511498	CNNM1	Q9NRU3	951 aa		11.18	□□□□□ -0.62
IFT122-223	ENST00000511498	RIPOR2	Q9Y4F9	1068 aa		11.18	□□□□□ -0.62
IFT122-223	ENST00000511498	CAMTA2	O94983	1202 aa		11.17	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms