RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 TRPM4Q8TD43 1214 aa8.29□□□□□ -1.08
HMGB1P47-201ENST00000511281 PNMA5Q96PV4 448 aa8.29□□□□□ -1.08
HMGB1P47-201ENST00000511281 SMARCA5O60264 1052 aaPredicted RBP8.28□□□□□ -1.08
HMGB1P47-201ENST00000511281 GARTP22102 1010 aa8.28□□□□□ -1.08
HMGB1P47-201ENST00000511281 EIF4A3P38919 411 aaKnown RBP8.28□□□□□ -1.08
HMGB1P47-201ENST00000511281 GPLD1P80108 840 aa8.28□□□□□ -1.08
HMGB1P47-201ENST00000511281 COL9A2Q14055 689 aaPredicted RBP8.28□□□□□ -1.08
HMGB1P47-201ENST00000511281 GIMAP6Q6P9H5 292 aa8.28□□□□□ -1.08
HMGB1P47-201ENST00000511281 DTHD1Q6ZMT9 781 aa8.28□□□□□ -1.08
HMGB1P47-201ENST00000511281 RIPOR1Q6ZS17 1223 aa8.28□□□□□ -1.08
HMGB1P47-201ENST00000511281 NCAPG2Q86XI2 1143 aa8.28□□□□□ -1.08
HMGB1P47-201ENST00000511281 PHC3Q8NDX5 983 aa8.28□□□□□ -1.08
HMGB1P47-201ENST00000511281 SLC30A3Q99726 388 aa8.28□□□□□ -1.08
HMGB1P47-201ENST00000511281 NT5C1AQ9BXI3 368 aa8.28□□□□□ -1.08
HMGB1P47-201ENST00000511281 GREM1O60565 184 aa8.27□□□□□ -1.09
HMGB1P47-201ENST00000511281 GRIA4P48058 902 aa8.27□□□□□ -1.09
HMGB1P47-201ENST00000511281 GRIN2CQ14957 1233 aa8.27□□□□□ -1.09
HMGB1P47-201ENST00000511281 NBPF6Q5VWK0 638 aa8.27□□□□□ -1.09
HMGB1P47-201ENST00000511281 CCDC155Q8N6L0 562 aa8.27□□□□□ -1.09
HMGB1P47-201ENST00000511281 NXPE3Q969Y0 559 aa8.27□□□□□ -1.09
HMGB1P47-201ENST00000511281 ZNF837Q96EG3 531 aaPredicted RBP8.27□□□□□ -1.09
HMGB1P47-201ENST00000511281 NBPF4Q96M43 638 aa8.27□□□□□ -1.09
HMGB1P47-201ENST00000511281 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.27□□□□□ -1.09
HMGB1P47-201ENST00000511281 TRIM56Q9BRZ2 755 aaKnown RBP8.27□□□□□ -1.09
HMGB1P47-201ENST00000511281 AAASQ9NRG9 546 aa8.27□□□□□ -1.09
HMGB1P47-201ENST00000511281 HMGB1P09429 215 aaKnown RBP8.26□□□□□ -1.09
HMGB1P47-201ENST00000511281 SOX9P48436 509 aa8.26□□□□□ -1.09
HMGB1P47-201ENST00000511281 LIG3P49916 1009 aa8.26□□□□□ -1.09
HMGB1P47-201ENST00000511281 RPS26P62854 115 aaKnown RBP8.26□□□□□ -1.09
HMGB1P47-201ENST00000511281 ABHD17AQ96GS6 310 aa8.26□□□□□ -1.09
HMGB1P47-201ENST00000511281 STRIP2Q9ULQ0 834 aa8.26□□□□□ -1.09
HMGB1P47-201ENST00000511281 ENC1O14682 589 aa8.25□□□□□ -1.09
HMGB1P47-201ENST00000511281 STK10O94804 968 aaKnown RBP8.25□□□□□ -1.09
HMGB1P47-201ENST00000511281 ACPPP15309 386 aa8.25□□□□□ -1.09
HMGB1P47-201ENST00000511281 GBP2P32456 591 aaPredicted RBP8.25□□□□□ -1.09
HMGB1P47-201ENST00000511281 LMNB2Q03252 620 aa8.25□□□□□ -1.09
HMGB1P47-201ENST00000511281 NEUROD1Q13562 356 aa8.25□□□□□ -1.09
HMGB1P47-201ENST00000511281 PCSK7Q16549 785 aa8.25□□□□□ -1.09
HMGB1P47-201ENST00000511281 CCDC144BQ3MJ40 725 aa8.25□□□□□ -1.09
HMGB1P47-201ENST00000511281 AGMOQ6ZNB7 445 aa8.25□□□□□ -1.09
HMGB1P47-201ENST00000511281 ZNF296Q8WUU4 475 aaPredicted RBP8.25□□□□□ -1.09
HMGB1P47-201ENST00000511281 BHMTQ93088 406 aa8.25□□□□□ -1.09
HMGB1P47-201ENST00000511281 KIFC2Q96AC6 838 aa8.25□□□□□ -1.09
HMGB1P47-201ENST00000511281 EAF1Q96JC9 268 aaPredicted RBP8.25□□□□□ -1.09
HMGB1P47-201ENST00000511281 NECAB3Q96P71 396 aaPredicted RBP8.25□□□□□ -1.09
HMGB1P47-201ENST00000511281 ZNF576Q9H609 170 aa8.25□□□□□ -1.09
HMGB1P47-201ENST00000511281 PHF24Q9UPV7 400 aa8.25□□□□□ -1.09
HMGB1P47-201ENST00000511281 AKAP2Q9Y2D5 859 aa8.25□□□□□ -1.09
HMGB1P47-201ENST00000511281 A0A096LPE4 126 aa8.24□□□□□ -1.09
HMGB1P47-201ENST00000511281 A0A1W2PPZ6 126 aa8.24□□□□□ -1.09
HMGB1P47-201ENST00000511281 CD33P20138 364 aa8.24□□□□□ -1.09
HMGB1P47-201ENST00000511281 ITGA6P23229 1130 aa8.24□□□□□ -1.09
HMGB1P47-201ENST00000511281 LAPTM4AQ15012 233 aa8.24□□□□□ -1.09
HMGB1P47-201ENST00000511281 FBXL19Q6PCT2 694 aa8.24□□□□□ -1.09
HMGB1P47-201ENST00000511281 SENP2Q9HC62 589 aa8.24□□□□□ -1.09
HMGB1P47-201ENST00000511281 SUPT16HQ9Y5B9 1047 aaKnown RBP8.24□□□□□ -1.09
HMGB1P47-201ENST00000511281 LOC102724428A0A0B4J2F2 783 aa8.23□□□□□ -1.09
HMGB1P47-201ENST00000511281 ZBTB42B2RXF5 422 aa8.23□□□□□ -1.09
HMGB1P47-201ENST00000511281 GFRA3O60609 400 aa8.23□□□□□ -1.09
HMGB1P47-201ENST00000511281 CELA3AP09093 270 aa8.23□□□□□ -1.09
HMGB1P47-201ENST00000511281 HSP90B1P14625 803 aaKnown RBP8.23□□□□□ -1.09
HMGB1P47-201ENST00000511281 FGFR3P22607 806 aa8.23□□□□□ -1.09
HMGB1P47-201ENST00000511281 SIK1P57059 783 aa8.23□□□□□ -1.09
HMGB1P47-201ENST00000511281 CCDC84Q86UT8 332 aaPredicted RBP8.23□□□□□ -1.09
HMGB1P47-201ENST00000511281 SPACA7Q96KW9 195 aa8.23□□□□□ -1.09
HMGB1P47-201ENST00000511281 PBX4Q9BYU1 374 aa8.23□□□□□ -1.09
HMGB1P47-201ENST00000511281 OSBPL2Q9H1P3 480 aa8.23□□□□□ -1.09
HMGB1P47-201ENST00000511281 ROBO2Q9HCK4 1378 aa8.22□□□□□ -1.09
HMGB1P47-201ENST00000511281 SOBPA7XYQ1 873 aa8.22□□□□□ -1.09
HMGB1P47-201ENST00000511281 PDE2AO00408 941 aaPredicted RBP8.22□□□□□ -1.09
HMGB1P47-201ENST00000511281 FBXO24O75426 580 aa8.22□□□□□ -1.09
HMGB1P47-201ENST00000511281 SERINC3Q13530 473 aa8.22□□□□□ -1.09
HMGB1P47-201ENST00000511281 SPRED3Q2MJR0 410 aa8.22□□□□□ -1.09
HMGB1P47-201ENST00000511281 TPTE2Q6XPS3 522 aa8.22□□□□□ -1.09
HMGB1P47-201ENST00000511281 NSUN5Q96P11 429 aaKnown RBP8.22□□□□□ -1.09
HMGB1P47-201ENST00000511281 LRRC3Q9BY71 257 aa8.22□□□□□ -1.09
HMGB1P47-201ENST00000511281 AVENQ9NQS1 362 aaPredicted RBP8.22□□□□□ -1.09
HMGB1P47-201ENST00000511281 SEC31BQ9NQW1 1179 aa8.22□□□□□ -1.09
HMGB1P47-201ENST00000511281 TLDC2A0PJX2 215 aa8.21□□□□□ -1.1
HMGB1P47-201ENST00000511281 MINDY4BA8MYZ0 360 aa8.21□□□□□ -1.1
HMGB1P47-201ENST00000511281 SIN3BO75182 1162 aa8.21□□□□□ -1.1
HMGB1P47-201ENST00000511281 FAAP100Q0VG06 881 aa8.21□□□□□ -1.1
HMGB1P47-201ENST00000511281 CAMK2GQ13555 558 aaPredicted RBP8.21□□□□□ -1.1
HMGB1P47-201ENST00000511281 ZNF468Q5VIY5 522 aaPredicted RBP8.21□□□□□ -1.1
HMGB1P47-201ENST00000511281 SLITRK4Q8IW52 837 aa8.21□□□□□ -1.1
HMGB1P47-201ENST00000511281 MKL1Q969V6 931 aa8.21□□□□□ -1.1
HMGB1P47-201ENST00000511281 TRIM47Q96LD4 638 aa8.21□□□□□ -1.1
HMGB1P47-201ENST00000511281 HHIPQ96QV1 700 aa8.21□□□□□ -1.1
HMGB1P47-201ENST00000511281 TMA7Q9Y2S6 64 aaKnown RBP8.21□□□□□ -1.1
HMGB1P47-201ENST00000511281 METTL12A8MUP2 240 aa8.2□□□□□ -1.1
HMGB1P47-201ENST00000511281 ST8SIA5O15466 376 aa8.2□□□□□ -1.1
HMGB1P47-201ENST00000511281 TRPA1O75762 1119 aa8.2□□□□□ -1.1
HMGB1P47-201ENST00000511281 PF4P02776 101 aa8.2□□□□□ -1.1
HMGB1P47-201ENST00000511281 TFE3P19532 575 aaPredicted RBP8.2□□□□□ -1.1
HMGB1P47-201ENST00000511281 NASPP49321 788 aaPredicted RBP8.2□□□□□ -1.1
HMGB1P47-201ENST00000511281 NFX1Q12986 1120 aaKnown RBP8.2□□□□□ -1.1
HMGB1P47-201ENST00000511281 TTBK2Q6IQ55 1244 aa8.2□□□□□ -1.1
HMGB1P47-201ENST00000511281 FAM196AQ6ZSG2 479 aa8.2□□□□□ -1.1
HMGB1P47-201ENST00000511281 TRIM42Q8IWZ5 723 aa8.2□□□□□ -1.1
HMGB1P47-201ENST00000511281 CKAP2LQ8IYA6 745 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms