RNA–Protein interactions for RNA: ENST00000511124.1

CLOCK-209, Transcript of clock circadian regulator, humanhuman

TSL 1 (best)

Gene CLOCK, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-209ENST00000511124 CRYBG1Q9Y4K1 1723 aa3.49□□□□□ -1.85
CLOCK-209ENST00000511124 SEMA3EO15041 775 aa3.49□□□□□ -1.85
CLOCK-209ENST00000511124 A1BGP04217 495 aa3.49□□□□□ -1.85
CLOCK-209ENST00000511124 PCCAP05165 728 aaPredicted RBP3.49□□□□□ -1.85
CLOCK-209ENST00000511124 GCLCP48506 637 aaPredicted RBP3.49□□□□□ -1.85
CLOCK-209ENST00000511124 HDLBPQ00341 1268 aaKnown RBP3.49□□□□□ -1.85
CLOCK-209ENST00000511124 SP3Q02447 781 aa3.49□□□□□ -1.85
CLOCK-209ENST00000511124 MVPQ14764 893 aaKnown RBP3.49□□□□□ -1.85
CLOCK-209ENST00000511124 STRIP1Q5VSL9 837 aa3.49□□□□□ -1.85
CLOCK-209ENST00000511124 TTLL5Q6EMB2 1281 aa3.49□□□□□ -1.85
CLOCK-209ENST00000511124 TNPO1Q92973 898 aaKnown RBP3.49□□□□□ -1.85
CLOCK-209ENST00000511124 PODXL2Q9NZ53 605 aa3.49□□□□□ -1.85
CLOCK-209ENST00000511124 FBXO3Q9UK99 471 aa3.49□□□□□ -1.85
CLOCK-209ENST00000511124 PHRF1Q9P1Y6 1649 aaKnown RBP3.49□□□□□ -1.85
CLOCK-209ENST00000511124 RAD17O75943 681 aa3.49□□□□□ -1.85
CLOCK-209ENST00000511124 VEGFBP49765 207 aa3.49□□□□□ -1.85
CLOCK-209ENST00000511124 METTL24Q5JXM2 366 aa3.49□□□□□ -1.85
CLOCK-209ENST00000511124 TBC1D9BQ66K14 1250 aa3.49□□□□□ -1.85
CLOCK-209ENST00000511124 RSBN1LQ6PCB5 846 aaPredicted RBP3.49□□□□□ -1.85
CLOCK-209ENST00000511124 XAGE3Q8WTP9 111 aa3.49□□□□□ -1.85
CLOCK-209ENST00000511124 TESK2Q96S53 571 aa3.49□□□□□ -1.85
CLOCK-209ENST00000511124 NBPF3Q9H094 633 aa3.49□□□□□ -1.85
CLOCK-209ENST00000511124 MBIPQ9NS73 344 aa3.49□□□□□ -1.85
CLOCK-209ENST00000511124 NHSQ6T4R5 1651 aa3.49□□□□□ -1.85
CLOCK-209ENST00000511124 PRAMEF22A3QJZ6 481 aa3.49□□□□□ -1.85
CLOCK-209ENST00000511124 USP14P54578 494 aa3.49□□□□□ -1.85
CLOCK-209ENST00000511124 FKBP1AP62942 108 aaKnown RBP3.49□□□□□ -1.85
CLOCK-209ENST00000511124 MAP3K9P80192 1104 aa3.49□□□□□ -1.85
CLOCK-209ENST00000511124 KIF23Q02241 960 aaPredicted RBP3.49□□□□□ -1.85
CLOCK-209ENST00000511124 TRIM28Q13263 835 aaKnown RBP3.49□□□□□ -1.85
CLOCK-209ENST00000511124 ELMSAN1Q6PJG2 1045 aa3.49□□□□□ -1.85
CLOCK-209ENST00000511124 LDHAL6AQ6ZMR3 332 aa3.49□□□□□ -1.85
CLOCK-209ENST00000511124 ARRDC4Q8NCT1 418 aa3.49□□□□□ -1.85
CLOCK-209ENST00000511124 DNAJC2Q99543 621 aaKnown RBP3.49□□□□□ -1.85
CLOCK-209ENST00000511124 DENND2AQ9ULE3 1009 aa3.49□□□□□ -1.85
CLOCK-209ENST00000511124 ECE2O60344 883 aa3.48□□□□□ -1.85
CLOCK-209ENST00000511124 TFRCP02786 760 aaKnown RBP3.48□□□□□ -1.85
CLOCK-209ENST00000511124 HIBADHP31937 336 aaKnown RBP3.48□□□□□ -1.85
CLOCK-209ENST00000511124 UBE4AQ14139 1066 aa3.48□□□□□ -1.85
CLOCK-209ENST00000511124 WDR78Q5VTH9 848 aa3.48□□□□□ -1.85
CLOCK-209ENST00000511124 FTSJ3Q8IY81 847 aaKnown RBP3.48□□□□□ -1.85
CLOCK-209ENST00000511124 ZBTB38Q8NAP3 1195 aaPredicted RBP3.48□□□□□ -1.85
CLOCK-209ENST00000511124 SLAIN1Q8ND83 568 aa3.48□□□□□ -1.85
CLOCK-209ENST00000511124 MYD88Q99836 296 aa3.48□□□□□ -1.85
CLOCK-209ENST00000511124 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.48□□□□□ -1.854e-6■□□□□ 11.1
CLOCK-209ENST00000511124 KIF28PB7ZC32 967 aa3.48□□□□□ -1.85
CLOCK-209ENST00000511124 CAMTA2O94983 1202 aa3.48□□□□□ -1.85
CLOCK-209ENST00000511124 HSPA8P11142 646 aaKnown RBP3.48□□□□□ -1.85
CLOCK-209ENST00000511124 CCT4P50991 539 aaKnown RBP3.48□□□□□ -1.85
CLOCK-209ENST00000511124 SF3B3Q15393 1217 aaKnown RBP3.48□□□□□ -1.85
CLOCK-209ENST00000511124 NBPF20Q3BBV1 942 aa3.48□□□□□ -1.85
CLOCK-209ENST00000511124 TBC1D10BQ4KMP7 808 aaPredicted RBP3.48□□□□□ -1.85
CLOCK-209ENST00000511124 KSR2Q6VAB6 950 aa3.48□□□□□ -1.85
CLOCK-209ENST00000511124 NECAB2Q7Z6G3 386 aa3.48□□□□□ -1.85
CLOCK-209ENST00000511124 TTC6Q86TZ1 520 aa3.48□□□□□ -1.85
CLOCK-209ENST00000511124 ERO1BQ86YB8 467 aa3.48□□□□□ -1.85
CLOCK-209ENST00000511124 ARHGEF28Q8N1W1 1705 aaKnown RBP3.48□□□□□ -1.85
CLOCK-209ENST00000511124 BBXQ8WY36 941 aaPredicted RBP3.48□□□□□ -1.85
CLOCK-209ENST00000511124 MRS2Q9HD23 443 aa3.48□□□□□ -1.85
CLOCK-209ENST00000511124 GGA3Q9NZ52 723 aa3.48□□□□□ -1.85
CLOCK-209ENST00000511124 PIK3C2AO00443 1686 aa3.48□□□□□ -1.85
CLOCK-209ENST00000511124 MROH5Q6ZUA9 1318 aa3.48□□□□□ -1.85
CLOCK-209ENST00000511124 FZD9O00144 591 aa3.48□□□□□ -1.85
CLOCK-209ENST00000511124 GTPBP6O43824 516 aaPredicted RBP3.48□□□□□ -1.85
CLOCK-209ENST00000511124 CHAF1AQ13111 956 aaPredicted RBP3.48□□□□□ -1.85
CLOCK-209ENST00000511124 DUSP27Q5VZP5 1158 aa3.48□□□□□ -1.85
CLOCK-209ENST00000511124 LINS1Q8NG48 757 aa3.48□□□□□ -1.85
CLOCK-209ENST00000511124 MCOLN1Q9GZU1 580 aa3.48□□□□□ -1.85
CLOCK-209ENST00000511124 NRAPQ86VF7 1730 aa3.47□□□□□ -1.85
CLOCK-209ENST00000511124 IL16Q14005 1332 aa3.47□□□□□ -1.85
CLOCK-209ENST00000511124 RAD50Q92878 1312 aa3.47□□□□□ -1.85
CLOCK-209ENST00000511124 A0A1W2PPC1 479 aa3.47□□□□□ -1.85
CLOCK-209ENST00000511124 KBTBD13C9JR72 458 aa3.47□□□□□ -1.85
CLOCK-209ENST00000511124 GPR25O00155 361 aa3.47□□□□□ -1.85
CLOCK-209ENST00000511124 TNPO2O14787 897 aaKnown RBP3.47□□□□□ -1.85
CLOCK-209ENST00000511124 PLIN1O60240 522 aa3.47□□□□□ -1.85
CLOCK-209ENST00000511124 EVI5O60447 810 aa3.47□□□□□ -1.85
CLOCK-209ENST00000511124 PPP2R1AP30153 589 aa3.47□□□□□ -1.85
CLOCK-209ENST00000511124 DDR1Q08345 913 aa3.47□□□□□ -1.85
CLOCK-209ENST00000511124 AOC3Q16853 763 aa3.47□□□□□ -1.85
CLOCK-209ENST00000511124 INTS5Q6P9B9 1019 aaKnown RBP3.47□□□□□ -1.85
CLOCK-209ENST00000511124 SLC4A10Q6U841 1118 aa3.47□□□□□ -1.85
CLOCK-209ENST00000511124 VTI1AQ96AJ9 217 aa3.47□□□□□ -1.85
CLOCK-209ENST00000511124 IRF2BPLQ9H1B7 796 aa3.47□□□□□ -1.85
CLOCK-209ENST00000511124 TRPM3Q9HCF6 1732 aaPredicted RBP3.47□□□□□ -1.85
CLOCK-209ENST00000511124 MEGF6O75095 1541 aa3.47□□□□□ -1.85
CLOCK-209ENST00000511124 WNK3Q9BYP7 1800 aa3.47□□□□□ -1.85
CLOCK-209ENST00000511124 CXCL11O14625 94 aa3.47□□□□□ -1.85
CLOCK-209ENST00000511124 LDHBP07195 334 aaKnown RBP3.47□□□□□ -1.85
CLOCK-209ENST00000511124 HOXC6P09630 235 aa3.47□□□□□ -1.85
CLOCK-209ENST00000511124 UBTFL1P0CB47 393 aaPredicted RBP3.47□□□□□ -1.85
CLOCK-209ENST00000511124 CXCL9Q07325 125 aa3.47□□□□□ -1.85
CLOCK-209ENST00000511124 CCDC27Q2M243 656 aa3.47□□□□□ -1.85
CLOCK-209ENST00000511124 CYP4F22Q6NT55 531 aa3.47□□□□□ -1.85
CLOCK-209ENST00000511124 CCDC155Q8N6L0 562 aa3.47□□□□□ -1.85
CLOCK-209ENST00000511124 TMEM87AQ8NBN3 555 aa3.47□□□□□ -1.85
CLOCK-209ENST00000511124 DNAAF4Q8WXU2 420 aa3.47□□□□□ -1.85
CLOCK-209ENST00000511124 ABCC12Q96J65 1359 aa3.47□□□□□ -1.85
CLOCK-209ENST00000511124 FAM205AQ6ZU69 1335 aa3.47□□□□□ -1.85
CLOCK-209ENST00000511124 LRRC37A3O60309 1634 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms