RNA–Protein interactions for RNA: ENST00000511019.1

TRIO-217, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 430 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-217ENST00000511019 WWC1Q8IX03 1113 aa10.68□□□□□ -0.7
TRIO-217ENST00000511019 REM2Q8IYK8 340 aaPredicted RBP10.68□□□□□ -0.7
TRIO-217ENST00000511019 OGFOD1Q8N543 542 aa10.68□□□□□ -0.7
TRIO-217ENST00000511019 CSRNP1Q96S65 589 aa10.68□□□□□ -0.7
TRIO-217ENST00000511019 GMLQ99445 158 aa10.68□□□□□ -0.7
TRIO-217ENST00000511019 GREM2Q9H772 168 aa10.68□□□□□ -0.7
TRIO-217ENST00000511019 LEMD3Q9Y2U8 911 aa10.68□□□□□ -0.7
TRIO-217ENST00000511019 NEURL1BA8MQ27 555 aa10.67□□□□□ -0.7
TRIO-217ENST00000511019 CCT4P50991 539 aaKnown RBP10.67□□□□□ -0.7
TRIO-217ENST00000511019 FAM161AQ3B820 660 aa10.67□□□□□ -0.7
TRIO-217ENST00000511019 G2E3Q7L622 706 aa10.67□□□□□ -0.7
TRIO-217ENST00000511019 FBXW7Q969H0 707 aa10.67□□□□□ -0.7
TRIO-217ENST00000511019 ANKRD2Q9GZV1 360 aa10.67□□□□□ -0.7
TRIO-217ENST00000511019 COA1Q9GZY4 146 aa10.67□□□□□ -0.7
TRIO-217ENST00000511019 RNF186Q9NXI6 227 aa10.67□□□□□ -0.7
TRIO-217ENST00000511019 SAGE1Q9NXZ1 904 aa10.67□□□□□ -0.7
TRIO-217ENST00000511019 COL4A1P02462 1669 aa10.66□□□□□ -0.7
TRIO-217ENST00000511019 THSD7BQ9C0I4 1608 aa10.66□□□□□ -0.7
TRIO-217ENST00000511019 SLC10A3P09131 477 aa10.66□□□□□ -0.7
TRIO-217ENST00000511019 CCDC184Q52MB2 194 aa10.66□□□□□ -0.7
TRIO-217ENST00000511019 STRIP1Q5VSL9 837 aa10.66□□□□□ -0.7
TRIO-217ENST00000511019 UBE3BQ7Z3V4 1068 aa10.66□□□□□ -0.7
TRIO-217ENST00000511019 MPHOSPH8Q99549 860 aa10.66□□□□□ -0.7
TRIO-217ENST00000511019 ZNF804BA4D1E1 1349 aa10.65□□□□□ -0.7
TRIO-217ENST00000511019 IL16Q14005 1332 aa10.65□□□□□ -0.7
TRIO-217ENST00000511019 MYO3BQ8WXR4 1341 aa10.65□□□□□ -0.7
TRIO-217ENST00000511019 PITPNM2Q9BZ72 1349 aa10.65□□□□□ -0.7
TRIO-217ENST00000511019 UBE2Q2LH0YL09 131 aa10.65□□□□□ -0.7
TRIO-217ENST00000511019 CSF1RP07333 972 aa10.65□□□□□ -0.7
TRIO-217ENST00000511019 ITGA6P23229 1130 aa10.65□□□□□ -0.7
TRIO-217ENST00000511019 MMP14P50281 582 aa10.65□□□□□ -0.7
TRIO-217ENST00000511019 FKBP5Q13451 457 aaPredicted RBP10.65□□□□□ -0.7
TRIO-217ENST00000511019 GCKRQ14397 625 aa10.65□□□□□ -0.7
TRIO-217ENST00000511019 NBPF9Q3BBW0 867 aa10.65□□□□□ -0.7
TRIO-217ENST00000511019 DACT2Q5SW24 774 aa10.65□□□□□ -0.7
TRIO-217ENST00000511019 TTLL5Q6EMB2 1281 aa10.65□□□□□ -0.7
TRIO-217ENST00000511019 MXD3Q9BW11 206 aa10.65□□□□□ -0.7
TRIO-217ENST00000511019 PLA2G12BQ9BX93 195 aa10.65□□□□□ -0.7
TRIO-217ENST00000511019 MYH16Q9H6N6 1097 aa10.65□□□□□ -0.7
TRIO-217ENST00000511019 SCAF8Q9UPN6 1271 aaKnown RBP10.65□□□□□ -0.7
TRIO-217ENST00000511019 MED23Q9ULK4 1368 aa10.65□□□□□ -0.71
TRIO-217ENST00000511019 NF2P35240 595 aa10.64□□□□□ -0.71
TRIO-217ENST00000511019 KCNJ4P48050 445 aa10.64□□□□□ -0.71
TRIO-217ENST00000511019 FLIIQ13045 1269 aa10.64□□□□□ -0.71
TRIO-217ENST00000511019 TTLL12Q14166 644 aaPredicted RBP10.64□□□□□ -0.71
TRIO-217ENST00000511019 PRAMEF18Q5VWM3 479 aa10.64□□□□□ -0.71
TRIO-217ENST00000511019 MOB2Q70IA6 237 aa10.64□□□□□ -0.71
TRIO-217ENST00000511019 TXNRD3Q86VQ6 643 aa10.64□□□□□ -0.71
TRIO-217ENST00000511019 LINS1Q8NG48 757 aa10.64□□□□□ -0.71
TRIO-217ENST00000511019 DNAAF4Q8WXU2 420 aa10.64□□□□□ -0.71
TRIO-217ENST00000511019 HDAC9Q9UKV0 1011 aa10.64□□□□□ -0.71
TRIO-217ENST00000511019 SALL2Q9Y467 1007 aaPredicted RBP10.64□□□□□ -0.71
TRIO-217ENST00000511019 ZNF609O15014 1411 aa10.64□□□□□ -0.71
TRIO-217ENST00000511019 ANKRD18BA2A2Z9 1011 aa10.63□□□□□ -0.71
TRIO-217ENST00000511019 WNT10BO00744 389 aa10.63□□□□□ -0.71
TRIO-217ENST00000511019 VAMP4O75379 141 aa10.63□□□□□ -0.71
TRIO-217ENST00000511019 GTF2IP78347 998 aa10.63□□□□□ -0.71
TRIO-217ENST00000511019 RASAL3Q86YV0 1011 aa10.63□□□□□ -0.71
TRIO-217ENST00000511019 CASP7P55210 303 aa10.62□□□□□ -0.71
TRIO-217ENST00000511019 CHRNDQ07001 517 aa10.62□□□□□ -0.71
TRIO-217ENST00000511019 KIAA0825Q8IV33 1275 aa10.62□□□□□ -0.71
TRIO-217ENST00000511019 WDR63Q8IWG1 891 aa10.62□□□□□ -0.71
TRIO-217ENST00000511019 RNF39Q9H2S5 420 aa10.62□□□□□ -0.71
TRIO-217ENST00000511019 SASH1O94885 1247 aa10.61□□□□□ -0.71
TRIO-217ENST00000511019 TM4SF4P48230 202 aa10.61□□□□□ -0.71
TRIO-217ENST00000511019 EXOSC9Q06265 439 aaKnown RBP10.61□□□□□ -0.71
TRIO-217ENST00000511019 IFIT5Q13325 482 aaKnown RBP10.61□□□□□ -0.71
TRIO-217ENST00000511019 ARMC9Q7Z3E5 817 aa10.61□□□□□ -0.71
TRIO-217ENST00000511019 APOBEC3FQ8IUX4 373 aaKnown RBP10.61□□□□□ -0.71
TRIO-217ENST00000511019 MRS2Q9HD23 443 aa10.61□□□□□ -0.71
TRIO-217ENST00000511019 CD209Q9NNX6 404 aa10.61□□□□□ -0.71
TRIO-217ENST00000511019 POLR2AP24928 1970 aaKnown RBP10.6□□□□□ -0.71
TRIO-217ENST00000511019 ANP32CO43423 234 aa10.6□□□□□ -0.71
TRIO-217ENST00000511019 TAF5LO75529 589 aa10.6□□□□□ -0.71
TRIO-217ENST00000511019 TBC1D8O95759 1140 aa10.6□□□□□ -0.71
TRIO-217ENST00000511019 KLRK1P26718 216 aa10.6□□□□□ -0.71
TRIO-217ENST00000511019 FOXO4P98177 505 aa10.6□□□□□ -0.71
TRIO-217ENST00000511019 PRKG1Q13976 671 aa10.6□□□□□ -0.71
TRIO-217ENST00000511019 DLGAP5Q15398 846 aa10.6□□□□□ -0.71
TRIO-217ENST00000511019 CTU1Q7Z7A3 348 aaKnown RBP10.6□□□□□ -0.71
TRIO-217ENST00000511019 HELBQ8NG08 1087 aaPredicted RBP10.6□□□□□ -0.71
TRIO-217ENST00000511019 CHMP3Q9Y3E7 222 aa10.6□□□□□ -0.71
TRIO-217ENST00000511019 FANCIQ9NVI1 1328 aa10.59□□□□□ -0.71
TRIO-217ENST00000511019 SCN9AQ15858 1988 aa10.59□□□□□ -0.71
TRIO-217ENST00000511019 F6X3S4 739 aa10.59□□□□□ -0.71
TRIO-217ENST00000511019 PTPN12Q05209 780 aaKnown RBP10.59□□□□□ -0.71
TRIO-217ENST00000511019 PKN2Q16513 984 aaKnown RBP10.59□□□□□ -0.71
TRIO-217ENST00000511019 CCDC57Q2TAC2 916 aa10.59□□□□□ -0.71
TRIO-217ENST00000511019 BEND3Q5T5X7 828 aa10.59□□□□□ -0.71
TRIO-217ENST00000511019 LMBR1LQ6UX01 489 aa10.59□□□□□ -0.71
TRIO-217ENST00000511019 C15orf52Q6ZUT6 534 aaKnown RBP10.59□□□□□ -0.71
TRIO-217ENST00000511019 CASP8AP2Q9UKL3 1982 aa10.58□□□□□ -0.72
TRIO-217ENST00000511019 SNAP23O00161 211 aa10.58□□□□□ -0.72
TRIO-217ENST00000511019 MYO1BO43795 1136 aa10.58□□□□□ -0.72
TRIO-217ENST00000511019 PLIN1O60240 522 aa10.58□□□□□ -0.72
TRIO-217ENST00000511019 INHBEP58166 350 aa10.58□□□□□ -0.72
TRIO-217ENST00000511019 SREBF2Q12772 1141 aa10.58□□□□□ -0.72
TRIO-217ENST00000511019 MKRN3Q13064 507 aaKnown RBP10.58□□□□□ -0.72
TRIO-217ENST00000511019 TAF7LQ5H9L4 462 aa10.58□□□□□ -0.72
TRIO-217ENST00000511019 LDLRAD1Q5T700 205 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms