RNA–Protein interactions for RNA: ENST00000510171.3

DDX41-211, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-211ENST00000510171 NBPF9Q3BBW0 867 aa13.39□□□□□ -0.27
DDX41-211ENST00000510171 DACT2Q5SW24 774 aa13.39□□□□□ -0.27
DDX41-211ENST00000510171 FBXW7Q969H0 707 aa13.39□□□□□ -0.27
DDX41-211ENST00000510171 COA1Q9GZY4 146 aa13.39□□□□□ -0.27
DDX41-211ENST00000510171 GREM2Q9H772 168 aa13.39□□□□□ -0.27
DDX41-211ENST00000510171 HDAC9Q9UKV0 1011 aa13.39□□□□□ -0.27
DDX41-211ENST00000510171 CASP8AP2Q9UKL3 1982 aa13.38□□□□□ -0.27
DDX41-211ENST00000510171 MED23Q9ULK4 1368 aa13.38□□□□□ -0.27
DDX41-211ENST00000510171 TBC1D8O95759 1140 aa13.38□□□□□ -0.27
DDX41-211ENST00000510171 NF2P35240 595 aa13.38□□□□□ -0.27
DDX41-211ENST00000510171 MMP14P50281 582 aa13.38□□□□□ -0.27
DDX41-211ENST00000510171 CCT4P50991 539 aaKnown RBP13.38□□□□□ -0.27
DDX41-211ENST00000510171 STRIP1Q5VSL9 837 aa13.38□□□□□ -0.27
DDX41-211ENST00000510171 TSPYL6Q8N831 410 aa13.38□□□□□ -0.27
DDX41-211ENST00000510171 MXD3Q9BW11 206 aa13.38□□□□□ -0.27
DDX41-211ENST00000510171 PRKRIP1Q9H875 184 aaPredicted RBP13.38□□□□□ -0.27
DDX41-211ENST00000510171 LEMD3Q9Y2U8 911 aa13.38□□□□□ -0.27
DDX41-211ENST00000510171 MYO3BQ8WXR4 1341 aa13.38□□□□□ -0.27
DDX41-211ENST00000510171 WNT10BO00744 389 aa13.37□□□□□ -0.27
DDX41-211ENST00000510171 IGHMBP2P38935 993 aaKnown RBP13.37□□□□□ -0.27
DDX41-211ENST00000510171 TM4SF4P48230 202 aa13.37□□□□□ -0.27
DDX41-211ENST00000510171 TTLL5Q6EMB2 1281 aa13.37□□□□□ -0.27
DDX41-211ENST00000510171 ZNF296Q8WUU4 475 aaPredicted RBP13.37□□□□□ -0.27
DDX41-211ENST00000510171 STK31Q9BXU1 1019 aa13.37□□□□□ -0.27
DDX41-211ENST00000510171 PCDH10Q9P2E7 1040 aa13.37□□□□□ -0.27
DDX41-211ENST00000510171 HPS5Q9UPZ3 1129 aa13.37□□□□□ -0.27
DDX41-211ENST00000510171 NEURL1BA8MQ27 555 aa13.36□□□□□ -0.27
DDX41-211ENST00000510171 H7C1W4 665 aa13.36□□□□□ -0.27
DDX41-211ENST00000510171 CWF19L2Q2TBE0 894 aaKnown RBP13.36□□□□□ -0.27
DDX41-211ENST00000510171 TXNRD3Q86VQ6 643 aa13.36□□□□□ -0.27
DDX41-211ENST00000510171 ANKRD2Q9GZV1 360 aa13.36□□□□□ -0.27
DDX41-211ENST00000510171 GPR25O00155 361 aa13.35□□□□□ -0.27
DDX41-211ENST00000510171 SASH1O94885 1247 aa13.35□□□□□ -0.27
DDX41-211ENST00000510171 MKRN3Q13064 507 aaKnown RBP13.35□□□□□ -0.27
DDX41-211ENST00000510171 ARMC9Q7Z3E5 817 aa13.35□□□□□ -0.27
DDX41-211ENST00000510171 UBE3BQ7Z3V4 1068 aa13.35□□□□□ -0.27
DDX41-211ENST00000510171 MPHOSPH8Q99549 860 aa13.35□□□□□ -0.27
DDX41-211ENST00000510171 ZNF804BA4D1E1 1349 aa13.35□□□□□ -0.27
DDX41-211ENST00000510171 SLC4A2P04920 1241 aa13.34□□□□□ -0.27
DDX41-211ENST00000510171 ITGA6P23229 1130 aa13.34□□□□□ -0.27
DDX41-211ENST00000510171 PTPN12Q05209 780 aaKnown RBP13.34□□□□□ -0.27
DDX41-211ENST00000510171 SREBF2Q12772 1141 aa13.34□□□□□ -0.27
DDX41-211ENST00000510171 PRKG1Q13976 671 aa13.34□□□□□ -0.27
DDX41-211ENST00000510171 NOM1Q5C9Z4 860 aaKnown RBP13.34□□□□□ -0.27
DDX41-211ENST00000510171 APOBEC3FQ8IUX4 373 aaKnown RBP13.34□□□□□ -0.27
DDX41-211ENST00000510171 KIAA0825Q8IV33 1275 aa13.34□□□□□ -0.27
DDX41-211ENST00000510171 TSR2Q969E8 191 aaKnown RBP13.34□□□□□ -0.27
DDX41-211ENST00000510171 KCNJ4P48050 445 aa13.33□□□□□ -0.28
DDX41-211ENST00000510171 GTF2IP78347 998 aa13.33□□□□□ -0.28
DDX41-211ENST00000510171 GCKRQ14397 625 aa13.33□□□□□ -0.28
DDX41-211ENST00000510171 G2E3Q7L622 706 aa13.33□□□□□ -0.28
DDX41-211ENST00000510171 PLA2G12BQ9BX93 195 aa13.33□□□□□ -0.28
DDX41-211ENST00000510171 SCN9AQ15858 1988 aa13.32□□□□□ -0.28
DDX41-211ENST00000510171 CSF1RP07333 972 aa13.32□□□□□ -0.28
DDX41-211ENST00000510171 KLRK1P26718 216 aa13.32□□□□□ -0.28
DDX41-211ENST00000510171 ZEB1P37275 1124 aaPredicted RBP13.32□□□□□ -0.28
DDX41-211ENST00000510171 TWISTNBQ3B726 338 aaPredicted RBP13.32□□□□□ -0.28
DDX41-211ENST00000510171 LDLRAD1Q5T700 205 aa13.32□□□□□ -0.28
DDX41-211ENST00000510171 FBXO46Q6PJ61 603 aaPredicted RBP13.32□□□□□ -0.28
DDX41-211ENST00000510171 ANGEL1Q9UNK9 670 aaKnown RBP13.32□□□□□ -0.28
DDX41-211ENST00000510171 PAPPA2Q9BXP8 1791 aa13.32□□□□□ -0.28
DDX41-211ENST00000510171 FKTNO75072 461 aa13.31□□□□□ -0.28
DDX41-211ENST00000510171 DLGAP5Q15398 846 aa13.31□□□□□ -0.28
DDX41-211ENST00000510171 PRPF38BQ5VTL8 546 aaKnown RBP13.31□□□□□ -0.28
DDX41-211ENST00000510171 SPRYD7Q5W111 196 aa13.31□□□□□ -0.28
DDX41-211ENST00000510171 SLC10A4Q96EP9 437 aa13.31□□□□□ -0.28
DDX41-211ENST00000510171 ZBED3Q96IU2 234 aaPredicted RBP13.31□□□□□ -0.28
DDX41-211ENST00000510171 CFHR5Q9BXR6 569 aa13.31□□□□□ -0.28
DDX41-211ENST00000510171 DEFB129Q9H1M3 183 aa13.31□□□□□ -0.28
DDX41-211ENST00000510171 MYH16Q9H6N6 1097 aa13.31□□□□□ -0.28
DDX41-211ENST00000510171 CD209Q9NNX6 404 aa13.31□□□□□ -0.28
DDX41-211ENST00000510171 POLR2AP24928 1970 aaKnown RBP13.31□□□□□ -0.28
DDX41-211ENST00000510171 ANKRD18BA2A2Z9 1011 aa13.3□□□□□ -0.28
DDX41-211ENST00000510171 ALDH1A1P00352 501 aa13.3□□□□□ -0.28
DDX41-211ENST00000510171 CASP7P55210 303 aa13.3□□□□□ -0.28
DDX41-211ENST00000510171 INHBEP58166 350 aa13.3□□□□□ -0.28
DDX41-211ENST00000510171 CHRNDQ07001 517 aa13.3□□□□□ -0.28
DDX41-211ENST00000510171 CCDC27Q2M243 656 aa13.3□□□□□ -0.28
DDX41-211ENST00000510171 LINS1Q8NG48 757 aa13.3□□□□□ -0.28
DDX41-211ENST00000510171 MANSC4A6NHS7 340 aaPredicted RBP13.29□□□□□ -0.28
DDX41-211ENST00000510171 PPP1R12BO60237 982 aaPredicted RBP13.29□□□□□ -0.28
DDX41-211ENST00000510171 FLIIQ13045 1269 aa13.29□□□□□ -0.28
DDX41-211ENST00000510171 FKBP5Q13451 457 aaPredicted RBP13.29□□□□□ -0.28
DDX41-211ENST00000510171 WWC1Q8IX03 1113 aa13.29□□□□□ -0.28
DDX41-211ENST00000510171 DNAAF4Q8WXU2 420 aa13.29□□□□□ -0.28
DDX41-211ENST00000510171 R3HDMLQ9H3Y0 253 aa13.29□□□□□ -0.28
DDX41-211ENST00000510171 MYO1BO43795 1136 aa13.28□□□□□ -0.28
DDX41-211ENST00000510171 TAF5LO75529 589 aa13.28□□□□□ -0.28
DDX41-211ENST00000510171 IFIT5Q13325 482 aaKnown RBP13.28□□□□□ -0.28
DDX41-211ENST00000510171 SUPT20HL1Q3ZLR7 823 aa13.28□□□□□ -0.28
DDX41-211ENST00000510171 C15orf52Q6ZUT6 534 aaKnown RBP13.28□□□□□ -0.28
DDX41-211ENST00000510171 MTMR14Q8NCE2 650 aa13.28□□□□□ -0.28
DDX41-211ENST00000510171 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.28□□□□□ -0.28
DDX41-211ENST00000510171 FZD1Q9UP38 647 aa13.28□□□□□ -0.28
DDX41-211ENST00000510171 PPP2R3BQ9Y5P8 575 aa13.28□□□□□ -0.28
DDX41-211ENST00000510171 SNAP23O00161 211 aa13.27□□□□□ -0.29
DDX41-211ENST00000510171 MAP3K11Q16584 847 aa13.27□□□□□ -0.29
DDX41-211ENST00000510171 IFNL1Q8IU54 200 aa13.27□□□□□ -0.29
DDX41-211ENST00000510171 CERS5Q8N5B7 392 aa13.27□□□□□ -0.29
DDX41-211ENST00000510171 HELBQ8NG08 1087 aaPredicted RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms