RNA–Protein interactions for RNA: ENST00000509857.5

TRAPPC11-206, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-206ENST00000509857 MSL1Q68DK7 614 aa11.98□□□□□ -0.49
TRAPPC11-206ENST00000509857 POP1Q99575 1024 aaKnown RBP11.98□□□□□ -0.49
TRAPPC11-206ENST00000509857 BHLHE41Q9C0J9 482 aaPredicted RBP11.98□□□□□ -0.49
TRAPPC11-206ENST00000509857 SUV39H2Q9H5I1 410 aa11.98□□□□□ -0.49
TRAPPC11-206ENST00000509857 PNMA6FA0A0J9YX94 578 aa11.97□□□□□ -0.49
TRAPPC11-206ENST00000509857 A0A1W2PP55 124 aa11.97□□□□□ -0.49
TRAPPC11-206ENST00000509857 ERCC3P19447 782 aa11.97□□□□□ -0.49
TRAPPC11-206ENST00000509857 KCNMA1Q12791 1236 aa11.97□□□□□ -0.49
TRAPPC11-206ENST00000509857 TMCO4Q5TGY1 634 aa11.97□□□□□ -0.49
TRAPPC11-206ENST00000509857 NPAS4Q8IUM7 802 aa11.97□□□□□ -0.49
TRAPPC11-206ENST00000509857 HHIPQ96QV1 700 aa11.97□□□□□ -0.49
TRAPPC11-206ENST00000509857 PLVAPQ9BX97 442 aa11.97□□□□□ -0.49
TRAPPC11-206ENST00000509857 SPDYE3A6NKU9 549 aa11.96□□□□□ -0.49
TRAPPC11-206ENST00000509857 PDE2AO00408 941 aaPredicted RBP11.96□□□□□ -0.49
TRAPPC11-206ENST00000509857 P4HBP07237 508 aaKnown RBP11.96□□□□□ -0.49
TRAPPC11-206ENST00000509857 GSK3AP49840 483 aa11.96□□□□□ -0.49
TRAPPC11-206ENST00000509857 ALYREFQ86V81 257 aaKnown RBP11.96□□□□□ -0.49
TRAPPC11-206ENST00000509857 ADAM19Q9H013 955 aa11.96□□□□□ -0.49
TRAPPC11-206ENST00000509857 NPHS2Q9NP85 383 aa11.96□□□□□ -0.49
TRAPPC11-206ENST00000509857 COL8A1P27658 744 aa11.95□□□□□ -0.5
TRAPPC11-206ENST00000509857 IRS1P35568 1242 aa11.95□□□□□ -0.5
TRAPPC11-206ENST00000509857 ADAMTSL4Q6UY14 1074 aa11.95□□□□□ -0.5
TRAPPC11-206ENST00000509857 WFDC8Q8IUA0 241 aa11.95□□□□□ -0.5
TRAPPC11-206ENST00000509857 FBF1Q8TES7 1133 aa11.95□□□□□ -0.5
TRAPPC11-206ENST00000509857 NXPE3Q969Y0 559 aa11.95□□□□□ -0.5
TRAPPC11-206ENST00000509857 TRPA1O75762 1119 aa11.94□□□□□ -0.5
TRAPPC11-206ENST00000509857 GDF6Q6KF10 455 aaPredicted RBP11.94□□□□□ -0.5
TRAPPC11-206ENST00000509857 PTPRAP18433 802 aa11.93□□□□□ -0.5
TRAPPC11-206ENST00000509857 MAPK8P45983 427 aa11.93□□□□□ -0.5
TRAPPC11-206ENST00000509857 CCNJLQ8IV13 435 aa11.93□□□□□ -0.5
TRAPPC11-206ENST00000509857 DTWD1Q8N5C7 304 aa11.93□□□□□ -0.5
TRAPPC11-206ENST00000509857 IL22RA1Q8N6P7 574 aa11.93□□□□□ -0.5
TRAPPC11-206ENST00000509857 MUC3BQ9H195 1237 aa11.93□□□□□ -0.5
TRAPPC11-206ENST00000509857 TRAPPC3LQ5T215 181 aa11.92□□□□□ -0.5
TRAPPC11-206ENST00000509857 TCF12Q99081 682 aa11.92□□□□□ -0.5
TRAPPC11-206ENST00000509857 CDC27P30260 824 aa11.91□□□□□ -0.5
TRAPPC11-206ENST00000509857 DMRTC2Q8IXT2 367 aaPredicted RBP11.91□□□□□ -0.5
TRAPPC11-206ENST00000509857 EPS8L3Q8TE67 593 aaKnown RBP11.91□□□□□ -0.5
TRAPPC11-206ENST00000509857 LACRTQ9GZZ8 138 aa11.91□□□□□ -0.5
TRAPPC11-206ENST00000509857 SOX13Q9UN79 622 aa11.91□□□□□ -0.5
TRAPPC11-206ENST00000509857 A0A0A0MRY4 1105 aa11.9□□□□□ -0.5
TRAPPC11-206ENST00000509857 ALG1LQ6GMV1 187 aa11.9□□□□□ -0.5
TRAPPC11-206ENST00000509857 LIN7BQ9HAP6 207 aa11.9□□□□□ -0.5
TRAPPC11-206ENST00000509857 SRA1Q9HD15 236 aaKnown RBP11.9□□□□□ -0.5
TRAPPC11-206ENST00000509857 PPME1Q9Y570 386 aa11.9□□□□□ -0.5
TRAPPC11-206ENST00000509857 ATP2B2Q01814 1243 aa11.89□□□□□ -0.51
TRAPPC11-206ENST00000509857 RASSF7Q02833 373 aa11.89□□□□□ -0.51
TRAPPC11-206ENST00000509857 PRPF40BQ6NWY9 871 aaKnown RBP11.89□□□□□ -0.51
TRAPPC11-206ENST00000509857 BSNDQ8WZ55 320 aa11.89□□□□□ -0.51
TRAPPC11-206ENST00000509857 SETDB2Q96T68 719 aa11.89□□□□□ -0.51
TRAPPC11-206ENST00000509857 EHD4Q9H223 541 aa11.89□□□□□ -0.51
TRAPPC11-206ENST00000509857 LDHBP07195 334 aaKnown RBP11.88□□□□□ -0.51
TRAPPC11-206ENST00000509857 SPATA31C1P0DKV0 1188 aa11.88□□□□□ -0.51
TRAPPC11-206ENST00000509857 EPHA1P21709 976 aa11.88□□□□□ -0.51
TRAPPC11-206ENST00000509857 RAC1P63000 192 aa11.88□□□□□ -0.51
TRAPPC11-206ENST00000509857 PRRT3Q5FWE3 981 aa11.88□□□□□ -0.51
TRAPPC11-206ENST00000509857 PI16Q6UXB8 463 aa11.88□□□□□ -0.51
TRAPPC11-206ENST00000509857 FBXO33Q7Z6M2 555 aa11.88□□□□□ -0.51
TRAPPC11-206ENST00000509857 MAP4K3Q8IVH8 894 aa11.88□□□□□ -0.51
TRAPPC11-206ENST00000509857 FMR1NBQ8N0W7 255 aaPredicted RBP11.88□□□□□ -0.51
TRAPPC11-206ENST00000509857 WWC3Q9ULE0 1092 aa11.88□□□□□ -0.51
TRAPPC11-206ENST00000509857 PRPF40AO75400 957 aaKnown RBP11.87□□□□□ -0.51
TRAPPC11-206ENST00000509857 MFAP1P55081 439 aaKnown RBP11.87□□□□□ -0.51
TRAPPC11-206ENST00000509857 TRIM28Q13263 835 aaKnown RBP11.87□□□□□ -0.51
TRAPPC11-206ENST00000509857 GRM2Q14416 872 aa11.87□□□□□ -0.51
TRAPPC11-206ENST00000509857 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.87□□□□□ -0.51
TRAPPC11-206ENST00000509857 EAPPQ56P03 285 aaPredicted RBP11.87□□□□□ -0.51
TRAPPC11-206ENST00000509857 SH2B1Q9NRF2 756 aaPredicted RBP11.87□□□□□ -0.51
TRAPPC11-206ENST00000509857 NLRP2Q9NX02 1062 aa11.87□□□□□ -0.51
TRAPPC11-206ENST00000509857 TRAK1Q9UPV9 953 aa11.87□□□□□ -0.51
TRAPPC11-206ENST00000509857 GADD45BO75293 160 aaPredicted RBP11.86□□□□□ -0.51
TRAPPC11-206ENST00000509857 FGD1P98174 961 aa11.86□□□□□ -0.51
TRAPPC11-206ENST00000509857 VN1R5Q7Z5H4 357 aa11.86□□□□□ -0.51
TRAPPC11-206ENST00000509857 FBXO11Q86XK2 927 aa11.86□□□□□ -0.51
TRAPPC11-206ENST00000509857 GLIS3Q8NEA6 775 aa11.86□□□□□ -0.51
TRAPPC11-206ENST00000509857 DCAF5Q96JK2 942 aa11.86□□□□□ -0.51
TRAPPC11-206ENST00000509857 FAM177BA6PVY3 158 aa11.85□□□□□ -0.51
TRAPPC11-206ENST00000509857 METTL12A8MUP2 240 aa11.85□□□□□ -0.51
TRAPPC11-206ENST00000509857 FAM229AH3BQW9 127 aa11.85□□□□□ -0.51
TRAPPC11-206ENST00000509857 H3BRJ5 948 aa11.85□□□□□ -0.51
TRAPPC11-206ENST00000509857 DEAF1O75398 565 aaPredicted RBP11.85□□□□□ -0.51
TRAPPC11-206ENST00000509857 ELNP15502 786 aa11.85□□□□□ -0.51
TRAPPC11-206ENST00000509857 GRIA4P48058 902 aa11.85□□□□□ -0.51
TRAPPC11-206ENST00000509857 ABCB6Q9NP58 842 aa11.85□□□□□ -0.51
TRAPPC11-206ENST00000509857 ITPKAP23677 461 aa11.84□□□□□ -0.51
TRAPPC11-206ENST00000509857 PTPN12Q05209 780 aaKnown RBP11.84□□□□□ -0.51
TRAPPC11-206ENST00000509857 SETDB1Q15047 1291 aa11.84□□□□□ -0.51
TRAPPC11-206ENST00000509857 WNT8BQ93098 351 aa11.84□□□□□ -0.51
TRAPPC11-206ENST00000509857 ZCCHC6Q5VYS8 1495 aaKnown RBP11.83□□□□□ -0.52
TRAPPC11-206ENST00000509857 A0A096LPE4 126 aa11.83□□□□□ -0.52
TRAPPC11-206ENST00000509857 A0A1W2PPZ6 126 aa11.83□□□□□ -0.52
TRAPPC11-206ENST00000509857 TM4SF5O14894 197 aa11.83□□□□□ -0.52
TRAPPC11-206ENST00000509857 CABP4P57796 275 aa11.83□□□□□ -0.52
TRAPPC11-206ENST00000509857 ASAP3Q8TDY4 903 aa11.83□□□□□ -0.52
TRAPPC11-206ENST00000509857 BCO2Q9BYV7 579 aa11.83□□□□□ -0.52
TRAPPC11-206ENST00000509857 LINC01387J3KSC0 135 aa11.82□□□□□ -0.52
TRAPPC11-206ENST00000509857 GIPC1O14908 333 aa11.82□□□□□ -0.52
TRAPPC11-206ENST00000509857 PIP4K2BP78356 416 aa11.82□□□□□ -0.52
TRAPPC11-206ENST00000509857 SPRED3Q2MJR0 410 aa11.82□□□□□ -0.52
TRAPPC11-206ENST00000509857 DCAF11Q8TEB1 546 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms