RNA–Protein interactions for RNA: ENST00000509529.1

CAST-226, Transcript of calpastatin, humanhuman

TSL 2

Gene CAST, Length 3,066 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-226ENST00000509529 MUC3BQ9H195 1237 aa3.1□□□□□ -1.91
CAST-226ENST00000509529 C11orf16Q9NQ32 467 aa3.1□□□□□ -1.91
CAST-226ENST00000509529 NCOA2Q15596 1464 aa3.1□□□□□ -1.91
CAST-226ENST00000509529 MAPKBP1O60336 1514 aa3.1□□□□□ -1.91
CAST-226ENST00000509529 MMP20O60882 483 aa3.09□□□□□ -1.91
CAST-226ENST00000509529 DUOXA2Q1HG44 320 aa3.09□□□□□ -1.91
CAST-226ENST00000509529 UBASH3BQ8TF42 649 aa3.09□□□□□ -1.91
CAST-226ENST00000509529 FOXD4L4Q8WXT5 416 aaPredicted RBP3.09□□□□□ -1.91
CAST-226ENST00000509529 LEMD3Q9Y2U8 911 aa3.09□□□□□ -1.91
CAST-226ENST00000509529 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.09□□□□□ -1.91
CAST-226ENST00000509529 DDX3YO15523 660 aaKnown RBP3.09□□□□□ -1.91
CAST-226ENST00000509529 ADAM11O75078 769 aa3.09□□□□□ -1.91
CAST-226ENST00000509529 F13BP05160 661 aa3.09□□□□□ -1.91
CAST-226ENST00000509529 PSAPP07602 524 aa3.09□□□□□ -1.91
CAST-226ENST00000509529 ZNF865P0CJ78 1059 aaPredicted RBP3.09□□□□□ -1.91
CAST-226ENST00000509529 CDC25BP30305 580 aa3.09□□□□□ -1.91
CAST-226ENST00000509529 FBXL6Q8N531 539 aa3.09□□□□□ -1.91
CAST-226ENST00000509529 OGFOD1Q8N543 542 aa3.09□□□□□ -1.91
CAST-226ENST00000509529 ZNF594Q96JF6 807 aaPredicted RBP3.09□□□□□ -1.91
CAST-226ENST00000509529 PKNOX2Q96KN3 472 aa3.09□□□□□ -1.91
CAST-226ENST00000509529 RBSNQ9H1K0 784 aa3.09□□□□□ -1.91
CAST-226ENST00000509529 ALG2Q9H553 416 aa3.09□□□□□ -1.91
CAST-226ENST00000509529 SCAPERQ9BY12 1400 aa3.09□□□□□ -1.92
CAST-226ENST00000509529 DKK1O94907 266 aa3.08□□□□□ -1.92
CAST-226ENST00000509529 SART1O43290 800 aaKnown RBP3.08□□□□□ -1.92
CAST-226ENST00000509529 NEUROD2Q15784 382 aa3.08□□□□□ -1.92
CAST-226ENST00000509529 ADAMTSL4Q6UY14 1074 aa3.08□□□□□ -1.92
CAST-226ENST00000509529 SHISA5Q8N114 240 aa3.08□□□□□ -1.92
CAST-226ENST00000509529 SIX5Q8N196 739 aa3.08□□□□□ -1.92
CAST-226ENST00000509529 LARGE2Q8N3Y3 721 aa3.08□□□□□ -1.92
CAST-226ENST00000509529 GAS2L2Q8NHY3 880 aa3.08□□□□□ -1.92
CAST-226ENST00000509529 LACRTQ9GZZ8 138 aa3.08□□□□□ -1.92
CAST-226ENST00000509529 USP17L3A6NCW0 530 aa3.08□□□□□ -1.92
CAST-226ENST00000509529 USP17L4A6NCW7 530 aa3.08□□□□□ -1.92
CAST-226ENST00000509529 XYLBO75191 536 aa3.08□□□□□ -1.92
CAST-226ENST00000509529 MICAL2O94851 1124 aa3.08□□□□□ -1.92
CAST-226ENST00000509529 EGFRP00533 1210 aa3.08□□□□□ -1.92
CAST-226ENST00000509529 HOXD8P13378 290 aaPredicted RBP3.08□□□□□ -1.92
CAST-226ENST00000509529 SOX18P35713 384 aa3.08□□□□□ -1.92
CAST-226ENST00000509529 DGKZQ13574 1117 aa3.08□□□□□ -1.92
CAST-226ENST00000509529 USP17L2Q6R6M4 530 aa3.08□□□□□ -1.92
CAST-226ENST00000509529 USP17L1Q7RTZ2 530 aa3.08□□□□□ -1.92
CAST-226ENST00000509529 FAM43AQ8N2R8 423 aa3.08□□□□□ -1.92
CAST-226ENST00000509529 ATG3Q9NT62 314 aa3.08□□□□□ -1.92
CAST-226ENST00000509529 RTCBQ9Y3I0 505 aaKnown RBP3.08□□□□□ -1.92
CAST-226ENST00000509529 PALM3A6NDB9 673 aaPredicted RBP3.07□□□□□ -1.92
CAST-226ENST00000509529 FSCN2O14926 492 aa3.07□□□□□ -1.92
CAST-226ENST00000509529 CACTIN-AS1Q8N1I8 211 aa3.07□□□□□ -1.92
CAST-226ENST00000509529 ARXQ96QS3 562 aa3.07□□□□□ -1.92
CAST-226ENST00000509529 OSBPL1AQ9BXW6 950 aa3.07□□□□□ -1.92
CAST-226ENST00000509529 KRTAP9-3Q9BYQ3 159 aa3.07□□□□□ -1.92
CAST-226ENST00000509529 PAK6Q9NQU5 681 aaPredicted RBP3.07□□□□□ -1.92
CAST-226ENST00000509529 CARMIL2Q6F5E8 1435 aa3.07□□□□□ -1.92
CAST-226ENST00000509529 OPLAHO14841 1288 aa3.07□□□□□ -1.92
CAST-226ENST00000509529 LGR5O75473 907 aa3.07□□□□□ -1.92
CAST-226ENST00000509529 ATP11AP98196 1134 aa3.07□□□□□ -1.92
CAST-226ENST00000509529 GLIPR1L2Q4G1C9 344 aa3.07□□□□□ -1.92
CAST-226ENST00000509529 PLEKHM2Q8IWE5 1019 aa3.07□□□□□ -1.92
CAST-226ENST00000509529 FLCNQ8NFG4 579 aa3.07□□□□□ -1.92
CAST-226ENST00000509529 HIF3AQ9Y2N7 669 aa3.07□□□□□ -1.92
CAST-226ENST00000509529 MAP4P27816 1152 aaKnown RBP3.06□□□□□ -1.92
CAST-226ENST00000509529 SGO2Q562F6 1265 aa3.06□□□□□ -1.92
CAST-226ENST00000509529 ANKRD34AQ69YU3 496 aa3.06□□□□□ -1.92
CAST-226ENST00000509529 RGL4Q8IZJ4 473 aa3.06□□□□□ -1.92
CAST-226ENST00000509529 YTHDC1Q96MU7 727 aaKnown RBP3.06□□□□□ -1.92
CAST-226ENST00000509529 CFAP43Q8NDM7 1665 aa3.06□□□□□ -1.92
CAST-226ENST00000509529 BIVM-ERCC5R4GMW8 1640 aa3.06□□□□□ -1.92
CAST-226ENST00000509529 NCANO14594 1321 aa3.06□□□□□ -1.92
CAST-226ENST00000509529 PPP1R15AO75807 674 aaPredicted RBP3.06□□□□□ -1.92
CAST-226ENST00000509529 EPHA1P21709 976 aa3.06□□□□□ -1.92
CAST-226ENST00000509529 KLHL23Q8NBE8 558 aa3.06□□□□□ -1.92
CAST-226ENST00000509529 AGBL5Q8NDL9 886 aa3.06□□□□□ -1.92
CAST-226ENST00000509529 GIMAP7Q8NHV1 300 aa3.06□□□□□ -1.92
CAST-226ENST00000509529 KLHDC7BQ96G42 594 aa3.06□□□□□ -1.92
CAST-226ENST00000509529 QTRT2Q9H974 415 aaKnown RBP3.06□□□□□ -1.92
CAST-226ENST00000509529 BSDC1Q9NW68 430 aaPredicted RBP3.06□□□□□ -1.92
CAST-226ENST00000509529 KDM5BQ9UGL1 1544 aa3.06□□□□□ -1.92
CAST-226ENST00000509529 CLIP1P30622 1438 aa3.06□□□□□ -1.92
CAST-226ENST00000509529 PKN1Q16512 942 aa3.06□□□□□ -1.92
CAST-226ENST00000509529 CPSF6Q16630 551 aaKnown RBP eCLIP3.06□□□□□ -1.92
CAST-226ENST00000509529 TMEM132AQ24JP5 1023 aa3.06□□□□□ -1.92
CAST-226ENST00000509529 CMTR1Q8N1G2 835 aaKnown RBP3.06□□□□□ -1.92
CAST-226ENST00000509529 MKRN1Q9UHC7 482 aaKnown RBP3.06□□□□□ -1.92
CAST-226ENST00000509529 NOP58Q9Y2X3 529 aaKnown RBP3.06□□□□□ -1.92
CAST-226ENST00000509529 KCNMB2Q9Y691 235 aa3.06□□□□□ -1.92
CAST-226ENST00000509529 RRP9O43818 475 aaKnown RBP3.05□□□□□ -1.92
CAST-226ENST00000509529 FARP2O94887 1054 aaPredicted RBP3.05□□□□□ -1.92
CAST-226ENST00000509529 CDC27P30260 824 aa3.05□□□□□ -1.92
CAST-226ENST00000509529 CEP135Q66GS9 1140 aa3.05□□□□□ -1.92
CAST-226ENST00000509529 RNF208Q9H0X6 261 aa3.05□□□□□ -1.92
CAST-226ENST00000509529 CCDC88BA6NC98 1476 aa3.05□□□□□ -1.92
CAST-226ENST00000509529 FHAD1B1AJZ9 1412 aa3.05□□□□□ -1.92
CAST-226ENST00000509529 YEATS2Q9ULM3 1422 aa3.05□□□□□ -1.92
CAST-226ENST00000509529 PRRG2O14669 202 aa3.05□□□□□ -1.92
CAST-226ENST00000509529 GAS2O43903 313 aaKnown RBP3.05□□□□□ -1.92
CAST-226ENST00000509529 COL13A1Q5TAT6 717 aaPredicted RBP3.05□□□□□ -1.92
CAST-226ENST00000509529 FDX2Q6P4F2 183 aa3.05□□□□□ -1.92
CAST-226ENST00000509529 PPP4R2Q9NY27 417 aa3.05□□□□□ -1.92
CAST-226ENST00000509529 ZMYM3Q14202 1370 aa3.05□□□□□ -1.92
CAST-226ENST00000509529 VIRMAQ69YN4 1812 aaKnown RBP3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms