RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 USP17L4A6NCW7 530 aa20.26■□□□□ 0.83
PDLIM5-212ENST00000509333 PLIN1O60240 522 aa20.26■□□□□ 0.83
PDLIM5-212ENST00000509333 USP17L1Q7RTZ2 530 aa20.26■□□□□ 0.83
PDLIM5-212ENST00000509333 MICALL2Q8IY33 904 aa20.26■□□□□ 0.83
PDLIM5-212ENST00000509333 FRAT1Q92837 279 aaPredicted RBP20.26■□□□□ 0.83
PDLIM5-212ENST00000509333 GMLQ99445 158 aa20.26■□□□□ 0.83
PDLIM5-212ENST00000509333 UBTFL1P0CB47 393 aaPredicted RBP20.25■□□□□ 0.83
PDLIM5-212ENST00000509333 KCNJ4P48050 445 aa20.25■□□□□ 0.83
PDLIM5-212ENST00000509333 RFX5P48382 616 aaPredicted RBP20.25■□□□□ 0.83
PDLIM5-212ENST00000509333 RSBN1LQ6PCB5 846 aaPredicted RBP20.25■□□□□ 0.83
PDLIM5-212ENST00000509333 SAMD7Q7Z3H4 446 aa20.25■□□□□ 0.83
PDLIM5-212ENST00000509333 AGBL3Q8NEM8 1001 aa20.25■□□□□ 0.83
PDLIM5-212ENST00000509333 LRRC24Q50LG9 513 aa20.24■□□□□ 0.83
PDLIM5-212ENST00000509333 KLHDC4Q8TBB5 520 aa20.24■□□□□ 0.83
PDLIM5-212ENST00000509333 ZC3H15Q8WU90 426 aaKnown RBP20.24■□□□□ 0.83
PDLIM5-212ENST00000509333 MEIS3Q99687 375 aa20.24■□□□□ 0.83
PDLIM5-212ENST00000509333 CD209Q9NNX6 404 aa20.24■□□□□ 0.83
PDLIM5-212ENST00000509333 SCN9AQ15858 1988 aa20.23■□□□□ 0.83
PDLIM5-212ENST00000509333 UBE4AQ14139 1066 aa20.23■□□□□ 0.83
PDLIM5-212ENST00000509333 DACT2Q5SW24 774 aa20.23■□□□□ 0.83
PDLIM5-212ENST00000509333 ZKSCAN2Q63HK3 967 aa20.23■□□□□ 0.83
PDLIM5-212ENST00000509333 TRPM4Q8TD43 1214 aa20.23■□□□□ 0.83
PDLIM5-212ENST00000509333 HDAC5Q9UQL6 1122 aa20.23■□□□□ 0.83
PDLIM5-212ENST00000509333 EGFRP00533 1210 aa20.22■□□□□ 0.83
PDLIM5-212ENST00000509333 ZNF280AP59817 542 aaPredicted RBP20.22■□□□□ 0.83
PDLIM5-212ENST00000509333 PTPN12Q05209 780 aaKnown RBP20.22■□□□□ 0.83
PDLIM5-212ENST00000509333 STRIP1Q5VSL9 837 aa20.22■□□□□ 0.83
PDLIM5-212ENST00000509333 TTLL5Q6EMB2 1281 aa20.22■□□□□ 0.83
PDLIM5-212ENST00000509333 POTEDQ86YR6 584 aa20.22■□□□□ 0.83
PDLIM5-212ENST00000509333 CLUAP1Q96AJ1 413 aa20.22■□□□□ 0.83
PDLIM5-212ENST00000509333 LRRFIP2Q9Y608 721 aaKnown RBP20.22■□□□□ 0.83
PDLIM5-212ENST00000509333 MROH5Q6ZUA9 1318 aa20.22■□□□□ 0.83
PDLIM5-212ENST00000509333 TBC1D10BQ4KMP7 808 aaPredicted RBP20.21■□□□□ 0.83
PDLIM5-212ENST00000509333 RBM26Q5T8P6 1007 aaKnown RBP20.21■□□□□ 0.83
PDLIM5-212ENST00000509333 MXD3Q9BW11 206 aa20.21■□□□□ 0.83
PDLIM5-212ENST00000509333 ADAMTSL1Q8N6G6 1762 aa20.21■□□□□ 0.83
PDLIM5-212ENST00000509333 GNAI3P08754 354 aa20.2■□□□□ 0.82
PDLIM5-212ENST00000509333 IL1R1P14778 569 aa20.2■□□□□ 0.82
PDLIM5-212ENST00000509333 FMR1Q06787 632 aaKnown RBP eCLIP20.2■□□□□ 0.823e-9■■■■■ 33
PDLIM5-212ENST00000509333 FAM84BQ96KN1 310 aaPredicted RBP20.2■□□□□ 0.82
PDLIM5-212ENST00000509333 CREBZFQ9NS37 354 aa20.2■□□□□ 0.82
PDLIM5-212ENST00000509333 SPEF2Q9C093 1822 aa20.2■□□□□ 0.82
PDLIM5-212ENST00000509333 EYA2O00167 538 aa20.19■□□□□ 0.82
PDLIM5-212ENST00000509333 PDE8BO95263 885 aa20.19■□□□□ 0.82
PDLIM5-212ENST00000509333 USP17L8P0C7I0 530 aa20.19■□□□□ 0.82
PDLIM5-212ENST00000509333 GTF2IP78347 998 aa20.19■□□□□ 0.82
PDLIM5-212ENST00000509333 TMEM57Q8N5G2 664 aa20.19■□□□□ 0.82
PDLIM5-212ENST00000509333 VGLL2Q8N8G2 317 aa20.19■□□□□ 0.82
PDLIM5-212ENST00000509333 KLRG1Q96E93 195 aa20.19■□□□□ 0.82
PDLIM5-212ENST00000509333 ATG9AQ7Z3C6 839 aa20.18■□□□□ 0.82
PDLIM5-212ENST00000509333 TMEM88BA6NKF7 163 aa20.17■□□□□ 0.82
PDLIM5-212ENST00000509333 TRAF5O00463 557 aa20.17■□□□□ 0.82
PDLIM5-212ENST00000509333 SASH1O94885 1247 aa20.17■□□□□ 0.82
PDLIM5-212ENST00000509333 METTL24Q5JXM2 366 aa20.17■□□□□ 0.82
PDLIM5-212ENST00000509333 CST9Q5W186 159 aa20.17■□□□□ 0.82
PDLIM5-212ENST00000509333 CDC37L1Q7L3B6 337 aa20.17■□□□□ 0.82
PDLIM5-212ENST00000509333 ZNF804AQ7Z570 1209 aa20.17■□□□□ 0.82
PDLIM5-212ENST00000509333 FBXO33Q7Z6M2 555 aa20.17■□□□□ 0.82
PDLIM5-212ENST00000509333 TDRD7Q8NHU6 1098 aaKnown RBP20.17■□□□□ 0.82
PDLIM5-212ENST00000509333 FBXO3Q9UK99 471 aa20.17■□□□□ 0.82
PDLIM5-212ENST00000509333 ZNF609O15014 1411 aa20.17■□□□□ 0.82
PDLIM5-212ENST00000509333 HIBADHP31937 336 aaKnown RBP20.16■□□□□ 0.82
PDLIM5-212ENST00000509333 GYG1P46976 350 aa20.16■□□□□ 0.82
PDLIM5-212ENST00000509333 USP48Q86UV5 1035 aa20.16■□□□□ 0.82
PDLIM5-212ENST00000509333 GLIS2Q9BZE0 524 aaPredicted RBP20.16■□□□□ 0.82
PDLIM5-212ENST00000509333 COPRSQ9NQ92 184 aa20.16■□□□□ 0.82
PDLIM5-212ENST00000509333 FGFR2P21802 821 aa20.15■□□□□ 0.82
PDLIM5-212ENST00000509333 MMP14P50281 582 aa20.15■□□□□ 0.82
PDLIM5-212ENST00000509333 SCARF1Q14162 830 aa20.15■□□□□ 0.82
PDLIM5-212ENST00000509333 KIF4BQ2VIQ3 1234 aa20.15■□□□□ 0.82
PDLIM5-212ENST00000509333 DZIP1LQ8IYY4 767 aaKnown RBP20.15■□□□□ 0.82
PDLIM5-212ENST00000509333 FBXW7Q969H0 707 aa20.15■□□□□ 0.82
PDLIM5-212ENST00000509333 MYOZ2Q9NPC6 264 aa20.15■□□□□ 0.82
PDLIM5-212ENST00000509333 MYO3BQ8WXR4 1341 aa20.14■□□□□ 0.81
PDLIM5-212ENST00000509333 ZBTB7BO15156 539 aaPredicted RBP20.14■□□□□ 0.81
PDLIM5-212ENST00000509333 CIAO1O76071 339 aa20.14■□□□□ 0.81
PDLIM5-212ENST00000509333 GNAI2P04899 355 aa20.14■□□□□ 0.81
PDLIM5-212ENST00000509333 RLBP1P12271 317 aa20.14■□□□□ 0.81
PDLIM5-212ENST00000509333 MTX1Q13505 466 aa20.14■□□□□ 0.81
PDLIM5-212ENST00000509333 JMYQ8N9B5 988 aa20.14■□□□□ 0.81
PDLIM5-212ENST00000509333 DLK2Q6UY11 383 aa20.13■□□□□ 0.81
PDLIM5-212ENST00000509333 CERS5Q8N5B7 392 aa20.13■□□□□ 0.81
PDLIM5-212ENST00000509333 PA2G4Q9UQ80 394 aaKnown RBP20.13■□□□□ 0.81
PDLIM5-212ENST00000509333 ASTN2O75129 1339 aaPredicted RBP20.12■□□□□ 0.81
PDLIM5-212ENST00000509333 FAM205AQ6ZU69 1335 aa20.12■□□□□ 0.81
PDLIM5-212ENST00000509333 FKBP1AP62942 108 aaKnown RBP20.12■□□□□ 0.81
PDLIM5-212ENST00000509333 OGFOD1Q8N543 542 aa20.12■□□□□ 0.81
PDLIM5-212ENST00000509333 DCPSQ96C86 337 aaKnown RBP20.12■□□□□ 0.81
PDLIM5-212ENST00000509333 SIL1Q9H173 461 aa20.12■□□□□ 0.81
PDLIM5-212ENST00000509333 POLR2AP24928 1970 aaKnown RBP20.12■□□□□ 0.81
PDLIM5-212ENST00000509333 SRGAP3O43295 1099 aa20.11■□□□□ 0.81
PDLIM5-212ENST00000509333 IL15P40933 162 aaPredicted RBP20.11■□□□□ 0.81
PDLIM5-212ENST00000509333 BCAMP50895 628 aa20.11■□□□□ 0.81
PDLIM5-212ENST00000509333 NBPF9Q3BBW0 867 aa20.11■□□□□ 0.81
PDLIM5-212ENST00000509333 KIAA0825Q8IV33 1275 aa20.11■□□□□ 0.81
PDLIM5-212ENST00000509333 CEP126Q9P2H0 1117 aa20.11■□□□□ 0.81
PDLIM5-212ENST00000509333 PUM3Q15397 648 aaKnown RBP20.1■□□□□ 0.81
PDLIM5-212ENST00000509333 KRT26Q7Z3Y9 468 aa20.1■□□□□ 0.81
PDLIM5-212ENST00000509333 LPIN2Q92539 896 aa20.1■□□□□ 0.81
PDLIM5-212ENST00000509333 ZBED3Q96IU2 234 aaPredicted RBP20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms