RNA–Protein interactions for RNA: ENST00000509234.1

TRAPPC13-210, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-210ENST00000509234 BMP4P12644 408 aa7.22□□□□□ -1.25
TRAPPC13-210ENST00000509234 MAP2K3P46734 347 aa7.22□□□□□ -1.25
TRAPPC13-210ENST00000509234 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.22□□□□□ -1.25
TRAPPC13-210ENST00000509234 PRPF40BQ6NWY9 871 aaKnown RBP7.22□□□□□ -1.25
TRAPPC13-210ENST00000509234 FCHSD1Q86WN1 690 aa7.22□□□□□ -1.25
TRAPPC13-210ENST00000509234 FAM161BQ96MY7 647 aa7.22□□□□□ -1.25
TRAPPC13-210ENST00000509234 PNMA5Q96PV4 448 aa7.22□□□□□ -1.25
TRAPPC13-210ENST00000509234 SUV39H2Q9H5I1 410 aa7.22□□□□□ -1.25
TRAPPC13-210ENST00000509234 FGD5Q6ZNL6 1462 aa7.22□□□□□ -1.25
TRAPPC13-210ENST00000509234 A0A1W2PP55 124 aa7.21□□□□□ -1.26
TRAPPC13-210ENST00000509234 EDN3P14138 238 aa7.21□□□□□ -1.26
TRAPPC13-210ENST00000509234 COL25A1Q9BXS0 654 aaPredicted RBP7.21□□□□□ -1.26
TRAPPC13-210ENST00000509234 C12orf49Q9H741 205 aa7.21□□□□□ -1.26
TRAPPC13-210ENST00000509234 LATS2Q9NRM7 1088 aa7.21□□□□□ -1.26
TRAPPC13-210ENST00000509234 ARHGEF11O15085 1522 aa7.21□□□□□ -1.26
TRAPPC13-210ENST00000509234 TDRD9Q8NDG6 1382 aaKnown RBP7.2□□□□□ -1.26
TRAPPC13-210ENST00000509234 PHF20L1A8MW92 1017 aa7.2□□□□□ -1.26
TRAPPC13-210ENST00000509234 SORBS3O60504 671 aa7.2□□□□□ -1.26
TRAPPC13-210ENST00000509234 ACPPP15309 386 aa7.2□□□□□ -1.26
TRAPPC13-210ENST00000509234 SRSF11Q05519 484 aaKnown RBP7.2□□□□□ -1.26
TRAPPC13-210ENST00000509234 HYAL2Q12891 473 aa7.2□□□□□ -1.26
TRAPPC13-210ENST00000509234 NEUROD1Q13562 356 aa7.2□□□□□ -1.26
TRAPPC13-210ENST00000509234 GRM2Q14416 872 aa7.2□□□□□ -1.26
TRAPPC13-210ENST00000509234 ANKRD24Q8TF21 1146 aa7.2□□□□□ -1.26
TRAPPC13-210ENST00000509234 TCF12Q99081 682 aa7.2□□□□□ -1.26
TRAPPC13-210ENST00000509234 SRCIN1Q9C0H9 1055 aa7.2□□□□□ -1.26
TRAPPC13-210ENST00000509234 DZANK1Q9NVP4 752 aa7.2□□□□□ -1.26
TRAPPC13-210ENST00000509234 DNAJB12Q9NXW2 375 aaKnown RBP7.2□□□□□ -1.26
TRAPPC13-210ENST00000509234 SPG7Q9UQ90 795 aa7.2□□□□□ -1.26
TRAPPC13-210ENST00000509234 IGF1RP08069 1367 aa7.2□□□□□ -1.26
TRAPPC13-210ENST00000509234 LOC102724428A0A0B4J2F2 783 aa7.19□□□□□ -1.26
TRAPPC13-210ENST00000509234 ADH6P28332 368 aa7.19□□□□□ -1.26
TRAPPC13-210ENST00000509234 SIK1P57059 783 aa7.19□□□□□ -1.26
TRAPPC13-210ENST00000509234 PCBP4P57723 403 aaKnown RBP7.19□□□□□ -1.26
TRAPPC13-210ENST00000509234 XPCQ01831 940 aaPredicted RBP7.19□□□□□ -1.26
TRAPPC13-210ENST00000509234 PSMD2Q13200 908 aa7.19□□□□□ -1.26
TRAPPC13-210ENST00000509234 SVOPQ8N4V2 548 aa7.19□□□□□ -1.26
TRAPPC13-210ENST00000509234 ZKSCAN3Q9BRR0 538 aa7.19□□□□□ -1.26
TRAPPC13-210ENST00000509234 BACH2Q9BYV9 841 aa7.19□□□□□ -1.26
TRAPPC13-210ENST00000509234 BHLHE41Q9C0J9 482 aaPredicted RBP7.19□□□□□ -1.26
TRAPPC13-210ENST00000509234 NAGPAQ9UK23 515 aa7.19□□□□□ -1.26
TRAPPC13-210ENST00000509234 PRR12Q9ULL5 1215 aa7.19□□□□□ -1.26
TRAPPC13-210ENST00000509234 SLURP2P0DP57 97 aa7.18□□□□□ -1.26
TRAPPC13-210ENST00000509234 PCSK7Q16549 785 aa7.18□□□□□ -1.26
TRAPPC13-210ENST00000509234 ZNF385CQ66K41 422 aaPredicted RBP7.18□□□□□ -1.26
TRAPPC13-210ENST00000509234 KANK3Q6NY19 840 aa7.18□□□□□ -1.26
TRAPPC13-210ENST00000509234 SLCO4C1Q6ZQN7 724 aa7.18□□□□□ -1.26
TRAPPC13-210ENST00000509234 CCNJLQ8IV13 435 aa7.18□□□□□ -1.26
TRAPPC13-210ENST00000509234 C3orf58Q8NDZ4 430 aa7.18□□□□□ -1.26
TRAPPC13-210ENST00000509234 CRELD1Q96HD1 420 aa7.18□□□□□ -1.26
TRAPPC13-210ENST00000509234 NSUN5Q96P11 429 aaKnown RBP7.18□□□□□ -1.26
TRAPPC13-210ENST00000509234 BCO2Q9BYV7 579 aa7.18□□□□□ -1.26
TRAPPC13-210ENST00000509234 ABCB6Q9NP58 842 aa7.18□□□□□ -1.26
TRAPPC13-210ENST00000509234 SLC6A14Q9UN76 642 aa7.18□□□□□ -1.26
TRAPPC13-210ENST00000509234 MAGI1Q96QZ7 1491 aaPredicted RBP7.17□□□□□ -1.26
TRAPPC13-210ENST00000509234 ABCA10Q8WWZ4 1543 aa7.17□□□□□ -1.26
TRAPPC13-210ENST00000509234 ADAM23O75077 832 aa7.17□□□□□ -1.26
TRAPPC13-210ENST00000509234 C1orf229Q6ZS94 237 aaPredicted RBP7.17□□□□□ -1.26
TRAPPC13-210ENST00000509234 TMEM102Q8N9M5 508 aaPredicted RBP7.17□□□□□ -1.26
TRAPPC13-210ENST00000509234 PSMG3-AS1Q96PY0 264 aa7.17□□□□□ -1.26
TRAPPC13-210ENST00000509234 NLRP2Q9NX02 1062 aa7.17□□□□□ -1.26
TRAPPC13-210ENST00000509234 FRRS1LQ9P0K9 344 aa7.17□□□□□ -1.26
TRAPPC13-210ENST00000509234 FAM8A1Q9UBU6 413 aa7.17□□□□□ -1.26
TRAPPC13-210ENST00000509234 GDF2Q9UK05 429 aaPredicted RBP7.17□□□□□ -1.26
TRAPPC13-210ENST00000509234 GRIN2BQ13224 1484 aa7.17□□□□□ -1.26
TRAPPC13-210ENST00000509234 SNAPC4Q5SXM2 1469 aa7.17□□□□□ -1.26
TRAPPC13-210ENST00000509234 ELOA3CA0A087WX78 387 aaPredicted RBP7.16□□□□□ -1.26
TRAPPC13-210ENST00000509234 ELOA3DA6NLF2 546 aaPredicted RBP7.16□□□□□ -1.26
TRAPPC13-210ENST00000509234 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.16□□□□□ -1.26
TRAPPC13-210ENST00000509234 EIF4BP23588 611 aaKnown RBP7.16□□□□□ -1.26
TRAPPC13-210ENST00000509234 ADH7P40394 386 aa7.16□□□□□ -1.26
TRAPPC13-210ENST00000509234 ELOA3BQ3SY89 546 aa7.16□□□□□ -1.26
TRAPPC13-210ENST00000509234 NXPE4Q6UWF7 544 aa7.16□□□□□ -1.26
TRAPPC13-210ENST00000509234 ADAMTSL4Q6UY14 1074 aa7.16□□□□□ -1.26
TRAPPC13-210ENST00000509234 ILDR2Q71H61 639 aa7.16□□□□□ -1.26
TRAPPC13-210ENST00000509234 GOLGA6L1Q8N7Z2 621 aa7.16□□□□□ -1.26
TRAPPC13-210ENST00000509234 ELOA3Q8NG57 546 aa7.16□□□□□ -1.26
TRAPPC13-210ENST00000509234 TTC9Q92623 222 aa7.16□□□□□ -1.26
TRAPPC13-210ENST00000509234 ACDQ96AP0 544 aa7.16□□□□□ -1.26
TRAPPC13-210ENST00000509234 HHIPQ96QV1 700 aa7.16□□□□□ -1.26
TRAPPC13-210ENST00000509234 OSMRQ99650 979 aa7.16□□□□□ -1.26
TRAPPC13-210ENST00000509234 LPIN3Q9BQK8 851 aa7.16□□□□□ -1.26
TRAPPC13-210ENST00000509234 OXCT2Q9BYC2 517 aaPredicted RBP7.16□□□□□ -1.26
TRAPPC13-210ENST00000509234 PBX4Q9BYU1 374 aa7.16□□□□□ -1.26
TRAPPC13-210ENST00000509234 UBE2OQ9C0C9 1292 aaKnown RBP7.16□□□□□ -1.26
TRAPPC13-210ENST00000509234 GGA1Q9UJY5 639 aa7.16□□□□□ -1.26
TRAPPC13-210ENST00000509234 NSFL1CQ9UNZ2 370 aaKnown RBP7.16□□□□□ -1.26
TRAPPC13-210ENST00000509234 STARD13Q9Y3M8 1113 aa7.16□□□□□ -1.26
TRAPPC13-210ENST00000509234 CLASP1Q7Z460 1538 aa7.16□□□□□ -1.26
TRAPPC13-210ENST00000509234 PBRM1Q86U86 1689 aa7.16□□□□□ -1.26
TRAPPC13-210ENST00000509234 NEURL1BA8MQ27 555 aa7.15□□□□□ -1.26
TRAPPC13-210ENST00000509234 J3QW42 95 aa7.15□□□□□ -1.26
TRAPPC13-210ENST00000509234 EPXP11678 715 aa7.15□□□□□ -1.26
TRAPPC13-210ENST00000509234 ITPKAP23677 461 aa7.15□□□□□ -1.26
TRAPPC13-210ENST00000509234 ITGAEP38570 1179 aa7.15□□□□□ -1.26
TRAPPC13-210ENST00000509234 PTPN12Q05209 780 aaKnown RBP7.15□□□□□ -1.26
TRAPPC13-210ENST00000509234 C20orf204Q6ZNR8 217 aa7.15□□□□□ -1.26
TRAPPC13-210ENST00000509234 NCAPG2Q86XI2 1143 aa7.15□□□□□ -1.26
TRAPPC13-210ENST00000509234 NXPE3Q969Y0 559 aa7.15□□□□□ -1.26
TRAPPC13-210ENST00000509234 LRRC4BQ9NT99 713 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms