RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 WTIPA6NIX2 430 aaPredicted RBP23.44■■□□□ 1.34
UBE3D-207ENST00000509102 TRAF5O00463 557 aa23.44■■□□□ 1.34
UBE3D-207ENST00000509102 USP17L8P0C7I0 530 aa23.44■■□□□ 1.34
UBE3D-207ENST00000509102 STRIP1Q5VSL9 837 aa23.44■■□□□ 1.34
UBE3D-207ENST00000509102 OGFOD1Q8N543 542 aa23.44■■□□□ 1.34
UBE3D-207ENST00000509102 ZNF594Q96JF6 807 aaPredicted RBP23.44■■□□□ 1.34
UBE3D-207ENST00000509102 BICC1Q9H694 974 aaKnown RBP23.44■■□□□ 1.34
UBE3D-207ENST00000509102 TAF5LO75529 589 aa23.43■■□□□ 1.34
UBE3D-207ENST00000509102 HNRNPUQ00839 825 aaKnown RBP eCLIP23.43■■□□□ 1.34
UBE3D-207ENST00000509102 DEFB115Q30KQ5 88 aa23.43■■□□□ 1.34
UBE3D-207ENST00000509102 HELBQ8NG08 1087 aaPredicted RBP23.43■■□□□ 1.34
UBE3D-207ENST00000509102 GLIS2Q9BZE0 524 aaPredicted RBP23.43■■□□□ 1.34
UBE3D-207ENST00000509102 NOB1Q9ULX3 412 aaKnown RBP23.43■■□□□ 1.34
UBE3D-207ENST00000509102 HDAC5Q9UQL6 1122 aa23.43■■□□□ 1.34
UBE3D-207ENST00000509102 RASSF10A6NK89 507 aa23.42■■□□□ 1.34
UBE3D-207ENST00000509102 PLIN1O60240 522 aa23.42■■□□□ 1.34
UBE3D-207ENST00000509102 BRPF1P55201 1214 aaPredicted RBP23.42■■□□□ 1.34
UBE3D-207ENST00000509102 ZNF804AQ7Z570 1209 aa23.42■■□□□ 1.34
UBE3D-207ENST00000509102 PSME4Q14997 1843 aa23.41■■□□□ 1.34
UBE3D-207ENST00000509102 CELF2O95319 508 aaKnown RBP23.41■■□□□ 1.34
UBE3D-207ENST00000509102 MMP14P50281 582 aa23.41■■□□□ 1.34
UBE3D-207ENST00000509102 RARSP54136 660 aaKnown RBP23.41■■□□□ 1.34
UBE3D-207ENST00000509102 ZNF280AP59817 542 aaPredicted RBP23.41■■□□□ 1.34
UBE3D-207ENST00000509102 RABL6Q3YEC7 729 aaPredicted RBP23.41■■□□□ 1.34
UBE3D-207ENST00000509102 TTLL5Q6EMB2 1281 aa23.41■■□□□ 1.34
UBE3D-207ENST00000509102 PAXIP1Q6ZW49 1069 aaPredicted RBP23.41■■□□□ 1.34
UBE3D-207ENST00000509102 KRT26Q7Z3Y9 468 aa23.41■■□□□ 1.34
UBE3D-207ENST00000509102 TXNRD3Q86VQ6 643 aa23.41■■□□□ 1.34
UBE3D-207ENST00000509102 USP44Q9H0E7 712 aa23.41■■□□□ 1.34
UBE3D-207ENST00000509102 C15orf52Q6ZUT6 534 aaKnown RBP23.4■■□□□ 1.34
UBE3D-207ENST00000509102 SULF1Q8IWU6 871 aa23.4■■□□□ 1.34
UBE3D-207ENST00000509102 KAZALD1Q96I82 304 aa23.4■■□□□ 1.34
UBE3D-207ENST00000509102 ZNF408Q9H9D4 720 aa23.4■■□□□ 1.34
UBE3D-207ENST00000509102 MYOZ2Q9NPC6 264 aa23.4■■□□□ 1.34
UBE3D-207ENST00000509102 MROH5Q6ZUA9 1318 aa23.39■■□□□ 1.34
UBE3D-207ENST00000509102 TRPM7Q96QT4 1865 aa23.39■■□□□ 1.34
UBE3D-207ENST00000509102 KLRK1P26718 216 aa23.39■■□□□ 1.33
UBE3D-207ENST00000509102 ECE1P42892 770 aa23.39■■□□□ 1.33
UBE3D-207ENST00000509102 DACT2Q5SW24 774 aa23.39■■□□□ 1.33
UBE3D-207ENST00000509102 USP48Q86UV5 1035 aa23.39■■□□□ 1.33
UBE3D-207ENST00000509102 GMLQ99445 158 aa23.39■■□□□ 1.33
UBE3D-207ENST00000509102 CD209Q9NNX6 404 aa23.39■■□□□ 1.33
UBE3D-207ENST00000509102 HDAC9Q9UKV0 1011 aa23.39■■□□□ 1.33
UBE3D-207ENST00000509102 IPO8O15397 1037 aaKnown RBP23.38■■□□□ 1.33
UBE3D-207ENST00000509102 EGFRP00533 1210 aa23.38■■□□□ 1.33
UBE3D-207ENST00000509102 UBTFL1P0CB47 393 aaPredicted RBP23.38■■□□□ 1.33
UBE3D-207ENST00000509102 VEGFBP49765 207 aa23.38■■□□□ 1.33
UBE3D-207ENST00000509102 FMR1Q06787 632 aaKnown RBP eCLIP23.38■■□□□ 1.33
UBE3D-207ENST00000509102 CST9Q5W186 159 aa23.38■■□□□ 1.33
UBE3D-207ENST00000509102 GGA3Q9NZ52 723 aa23.38■■□□□ 1.33
UBE3D-207ENST00000509102 HSPA1AP0DMV8 641 aaKnown RBP23.37■■□□□ 1.33
UBE3D-207ENST00000509102 HSPA1BP0DMV9 641 aaKnown RBP23.37■■□□□ 1.33
UBE3D-207ENST00000509102 GTF2IP78347 998 aa23.37■■□□□ 1.33
UBE3D-207ENST00000509102 UBE4AQ14139 1066 aa23.37■■□□□ 1.33
UBE3D-207ENST00000509102 ARHGAP45Q92619 1136 aa23.37■■□□□ 1.33
UBE3D-207ENST00000509102 TLL2Q9Y6L7 1015 aa23.37■■□□□ 1.33
UBE3D-207ENST00000509102 SCARF1Q14162 830 aa23.36■■□□□ 1.33
UBE3D-207ENST00000509102 ANKRD44Q8N8A2 993 aa23.36■■□□□ 1.33
UBE3D-207ENST00000509102 SNAP23O00161 211 aa23.35■■□□□ 1.33
UBE3D-207ENST00000509102 METTL24Q5JXM2 366 aa23.35■■□□□ 1.33
UBE3D-207ENST00000509102 AIDAQ96BJ3 306 aa23.35■■□□□ 1.33
UBE3D-207ENST00000509102 WDR33Q9C0J8 1336 aaKnown RBP23.34■■□□□ 1.33
UBE3D-207ENST00000509102 PCNTO95613 3336 aa23.34■■□□□ 1.33
UBE3D-207ENST00000509102 ANGEL2Q5VTE6 544 aaKnown RBP23.34■■□□□ 1.33
UBE3D-207ENST00000509102 PUS3Q9BZE2 481 aaKnown RBP23.34■■□□□ 1.33
UBE3D-207ENST00000509102 RIPOR2Q9Y4F9 1068 aa23.34■■□□□ 1.33
UBE3D-207ENST00000509102 A0A1B0GUL6 1792 aa23.34■■□□□ 1.33
UBE3D-207ENST00000509102 IL1R1P14778 569 aa23.33■■□□□ 1.33
UBE3D-207ENST00000509102 GRM1Q13255 1194 aa23.33■■□□□ 1.33
UBE3D-207ENST00000509102 VPS37DQ86XT2 251 aa23.33■■□□□ 1.33
UBE3D-207ENST00000509102 MXD3Q9BW11 206 aa23.33■■□□□ 1.33
UBE3D-207ENST00000509102 PITPNM2Q9BZ72 1349 aa23.33■■□□□ 1.32
UBE3D-207ENST00000509102 IRS2Q9Y4H2 1338 aa23.33■■□□□ 1.32
UBE3D-207ENST00000509102 ADM5C9JUS6 153 aa23.32■■□□□ 1.32
UBE3D-207ENST00000509102 SAPCD2Q86UD0 394 aa23.32■■□□□ 1.32
UBE3D-207ENST00000509102 KIAA0825Q8IV33 1275 aa23.32■■□□□ 1.32
UBE3D-207ENST00000509102 C2orf69Q8N8R5 385 aa23.32■■□□□ 1.32
UBE3D-207ENST00000509102 FRAT1Q92837 279 aaPredicted RBP23.32■■□□□ 1.32
UBE3D-207ENST00000509102 HHIPL1Q96JK4 782 aa23.32■■□□□ 1.32
UBE3D-207ENST00000509102 CAPNS2Q96L46 248 aa23.32■■□□□ 1.32
UBE3D-207ENST00000509102 HIBADHP31937 336 aaKnown RBP23.31■■□□□ 1.32
UBE3D-207ENST00000509102 MAP2K1Q02750 393 aaPredicted RBP23.31■■□□□ 1.32
UBE3D-207ENST00000509102 CAVIN4Q5BKX8 364 aa23.31■■□□□ 1.32
UBE3D-207ENST00000509102 GNAI3P08754 354 aa23.3■■□□□ 1.32
UBE3D-207ENST00000509102 LRRC24Q50LG9 513 aa23.3■■□□□ 1.32
UBE3D-207ENST00000509102 SASH1O94885 1247 aa23.29■■□□□ 1.32
UBE3D-207ENST00000509102 PDE8BO95263 885 aa23.29■■□□□ 1.32
UBE3D-207ENST00000509102 FKBP1AP62942 108 aaKnown RBP23.29■■□□□ 1.32
UBE3D-207ENST00000509102 INTS3Q68E01 1043 aaKnown RBP23.29■■□□□ 1.32
UBE3D-207ENST00000509102 CYP4F22Q6NT55 531 aa23.29■■□□□ 1.32
UBE3D-207ENST00000509102 GBA2Q9HCG7 927 aaPredicted RBP23.29■■□□□ 1.32
UBE3D-207ENST00000509102 ASTN2O75129 1339 aaPredicted RBP23.29■■□□□ 1.32
UBE3D-207ENST00000509102 FRAT2O75474 233 aaPredicted RBP23.28■■□□□ 1.32
UBE3D-207ENST00000509102 GYG1P46976 350 aa23.28■■□□□ 1.32
UBE3D-207ENST00000509102 HUNKP57058 714 aa23.28■■□□□ 1.32
UBE3D-207ENST00000509102 ATF7IPQ6VMQ6 1270 aa23.28■■□□□ 1.32
UBE3D-207ENST00000509102 KLHDC4Q8TBB5 520 aa23.28■■□□□ 1.32
UBE3D-207ENST00000509102 BEGAINQ9BUH8 593 aa23.28■■□□□ 1.32
UBE3D-207ENST00000509102 ZBED9Q6R2W3 1325 aa23.28■■□□□ 1.32
UBE3D-207ENST00000509102 EYA2O00167 538 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms