RNA–Protein interactions for RNA: ENST00000509092.5

PDGFRA-207, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,417 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-207ENST00000509092 GCFC2P16383 781 aaKnown RBP11.56□□□□□ -0.56
PDGFRA-207ENST00000509092 AFAP1L1Q8TED9 768 aa11.56□□□□□ -0.56
PDGFRA-207ENST00000509092 CCDC102AQ96A19 550 aa11.56□□□□□ -0.56
PDGFRA-207ENST00000509092 CABS1Q96KC9 395 aa11.56□□□□□ -0.56
PDGFRA-207ENST00000509092 THUMPD2Q9BTF0 503 aaKnown RBP11.56□□□□□ -0.56
PDGFRA-207ENST00000509092 IFNKQ9P0W0 207 aa11.56□□□□□ -0.56
PDGFRA-207ENST00000509092 FAM169AQ9Y6X4 670 aa11.56□□□□□ -0.56
PDGFRA-207ENST00000509092 NPATQ14207 1427 aa11.56□□□□□ -0.56
PDGFRA-207ENST00000509092 DTNBO60941 627 aa11.56□□□□□ -0.56
PDGFRA-207ENST00000509092 NEBLO76041 1014 aa11.56□□□□□ -0.56
PDGFRA-207ENST00000509092 CPA1P15085 419 aa11.56□□□□□ -0.56
PDGFRA-207ENST00000509092 ZKSCAN8Q15776 578 aaPredicted RBP11.56□□□□□ -0.56
PDGFRA-207ENST00000509092 ME3Q16798 604 aa11.56□□□□□ -0.56
PDGFRA-207ENST00000509092 ANKZF1Q9H8Y5 726 aa11.56□□□□□ -0.56
PDGFRA-207ENST00000509092 CPSF1Q10570 1443 aaKnown RBP11.55□□□□□ -0.56
PDGFRA-207ENST00000509092 TMCO5BA8MYB1 307 aa11.55□□□□□ -0.56
PDGFRA-207ENST00000509092 PRKAR2BP31323 418 aa11.55□□□□□ -0.56
PDGFRA-207ENST00000509092 KIFC2Q96AC6 838 aa11.55□□□□□ -0.56
PDGFRA-207ENST00000509092 CALR3Q96L12 384 aaKnown RBP11.55□□□□□ -0.56
PDGFRA-207ENST00000509092 WDR24Q96S15 920 aa11.55□□□□□ -0.56
PDGFRA-207ENST00000509092 BPIFA3Q9BQP9 254 aa11.55□□□□□ -0.56
PDGFRA-207ENST00000509092 TM6SF1Q9BZW5 370 aa11.55□□□□□ -0.56
PDGFRA-207ENST00000509092 INHBEP58166 350 aa11.55□□□□□ -0.56
PDGFRA-207ENST00000509092 CHMP4BP1P59074 171 aa11.55□□□□□ -0.56
PDGFRA-207ENST00000509092 GNG11P61952 73 aa11.55□□□□□ -0.56
PDGFRA-207ENST00000509092 CASP8Q14790 479 aa11.55□□□□□ -0.56
PDGFRA-207ENST00000509092 NAIF1Q69YI7 327 aaPredicted RBP11.55□□□□□ -0.56
PDGFRA-207ENST00000509092 N4BP2L2Q92802 583 aaPredicted RBP11.55□□□□□ -0.56
PDGFRA-207ENST00000509092 GBP3Q9H0R5 595 aa11.55□□□□□ -0.56
PDGFRA-207ENST00000509092 EBAG9O00559 213 aa11.54□□□□□ -0.56
PDGFRA-207ENST00000509092 INPP5BP32019 993 aa11.54□□□□□ -0.56
PDGFRA-207ENST00000509092 NF2P35240 595 aa11.54□□□□□ -0.56
PDGFRA-207ENST00000509092 RDXP35241 583 aaKnown RBP11.54□□□□□ -0.56
PDGFRA-207ENST00000509092 TUBB4BP68371 445 aa11.54□□□□□ -0.56
PDGFRA-207ENST00000509092 CRYMQ14894 314 aa11.54□□□□□ -0.56
PDGFRA-207ENST00000509092 PREPLQ4J6C6 727 aaPredicted RBP11.54□□□□□ -0.56
PDGFRA-207ENST00000509092 SRGAP1Q7Z6B7 1085 aa11.54□□□□□ -0.56
PDGFRA-207ENST00000509092 TICAM2Q86XR7 235 aa11.54□□□□□ -0.56
PDGFRA-207ENST00000509092 NECAB1Q8N987 351 aa11.54□□□□□ -0.56
PDGFRA-207ENST00000509092 DHX58Q96C10 678 aa11.54□□□□□ -0.56
PDGFRA-207ENST00000509092 CLIC6Q96NY7 704 aa11.54□□□□□ -0.56
PDGFRA-207ENST00000509092 ZSWIM6Q9HCJ5 1215 aa11.54□□□□□ -0.56
PDGFRA-207ENST00000509092 ABCB6Q9NP58 842 aa11.54□□□□□ -0.56
PDGFRA-207ENST00000509092 CYP46A1Q9Y6A2 500 aa11.54□□□□□ -0.56
PDGFRA-207ENST00000509092 ANKRD33BA6NCL7 494 aa11.54□□□□□ -0.56
PDGFRA-207ENST00000509092 CHUKO15111 745 aa11.54□□□□□ -0.56
PDGFRA-207ENST00000509092 SHOX2O60902 331 aaPredicted RBP11.54□□□□□ -0.56
PDGFRA-207ENST00000509092 CTCFLQ8NI51 663 aaPredicted RBP11.54□□□□□ -0.56
PDGFRA-207ENST00000509092 PPP2R2CQ9Y2T4 447 aa11.54□□□□□ -0.56
PDGFRA-207ENST00000509092 MROH2AA6NES4 1674 aa11.53□□□□□ -0.56
PDGFRA-207ENST00000509092 CRYBG1Q9Y4K1 1723 aa11.53□□□□□ -0.56
PDGFRA-207ENST00000509092 RNF40O75150 1001 aa11.53□□□□□ -0.56
PDGFRA-207ENST00000509092 PAX7P23759 505 aa11.53□□□□□ -0.56
PDGFRA-207ENST00000509092 JAKMIP1Q96N16 626 aaKnown RBP11.53□□□□□ -0.56
PDGFRA-207ENST00000509092 PNKPQ96T60 521 aa11.53□□□□□ -0.56
PDGFRA-207ENST00000509092 ATXN2Q99700 1313 aaKnown RBP11.53□□□□□ -0.56
PDGFRA-207ENST00000509092 PLCD4Q9BRC7 762 aa11.53□□□□□ -0.56
PDGFRA-207ENST00000509092 TULP4Q9NRJ4 1543 aa11.53□□□□□ -0.56
PDGFRA-207ENST00000509092 KINO60870 393 aaKnown RBP11.52□□□□□ -0.56
PDGFRA-207ENST00000509092 PHACTR2O75167 634 aa11.52□□□□□ -0.56
PDGFRA-207ENST00000509092 AARSP49588 968 aaKnown RBP eCLIP11.52□□□□□ -0.56
PDGFRA-207ENST00000509092 MRPL12P52815 198 aaKnown RBP11.52□□□□□ -0.56
PDGFRA-207ENST00000509092 ISM2Q6H9L7 571 aa11.52□□□□□ -0.56
PDGFRA-207ENST00000509092 CCAR1Q8IX12 1150 aaKnown RBP11.52□□□□□ -0.56
PDGFRA-207ENST00000509092 FAM177A1Q8N128 213 aaPredicted RBP11.52□□□□□ -0.56
PDGFRA-207ENST00000509092 ZKSCAN4Q969J2 545 aaPredicted RBP11.52□□□□□ -0.56
PDGFRA-207ENST00000509092 ESF1Q9H501 851 aaKnown RBP11.52□□□□□ -0.56
PDGFRA-207ENST00000509092 CFAP45Q9UL16 551 aa11.52□□□□□ -0.56
PDGFRA-207ENST00000509092 ZFYVE9O95405 1425 aa11.52□□□□□ -0.57
PDGFRA-207ENST00000509092 A0A087WWV3 80 aa11.52□□□□□ -0.57
PDGFRA-207ENST00000509092 ARHGAP6O43182 974 aa11.52□□□□□ -0.57
PDGFRA-207ENST00000509092 CUTAO60888 179 aa11.52□□□□□ -0.57
PDGFRA-207ENST00000509092 PRPF6O94906 941 aaKnown RBP11.52□□□□□ -0.57
PDGFRA-207ENST00000509092 CCT5P48643 541 aa11.52□□□□□ -0.57
PDGFRA-207ENST00000509092 TTC19Q6DKK2 380 aaPredicted RBP11.52□□□□□ -0.57
PDGFRA-207ENST00000509092 LARP1Q6PKG0 1096 aaKnown RBP11.52□□□□□ -0.57
PDGFRA-207ENST00000509092 CCDC73Q6ZRK6 1079 aa11.52□□□□□ -0.57
PDGFRA-207ENST00000509092 PIAS4Q8N2W9 510 aaPredicted RBP11.52□□□□□ -0.57
PDGFRA-207ENST00000509092 CEP112Q8N8E3 955 aa11.52□□□□□ -0.57
PDGFRA-207ENST00000509092 TRIM6Q9C030 488 aaPredicted RBP11.52□□□□□ -0.57
PDGFRA-207ENST00000509092 SLC24A3Q9HC58 644 aa11.52□□□□□ -0.57
PDGFRA-207ENST00000509092 UGGT1Q9NYU2 1555 aa11.52□□□□□ -0.57
PDGFRA-207ENST00000509092 KIF20BQ96Q89 1820 aa11.52□□□□□ -0.57
PDGFRA-207ENST00000509092 RPGRIP1LQ68CZ1 1315 aa11.52□□□□□ -0.57
PDGFRA-207ENST00000509092 TUBBP07437 444 aa11.51□□□□□ -0.57
PDGFRA-207ENST00000509092 RESTQ13127 1097 aa11.51□□□□□ -0.57
PDGFRA-207ENST00000509092 NBPF5PQ86XG9 351 aaPredicted RBP11.51□□□□□ -0.57
PDGFRA-207ENST00000509092 AMOTL1Q8IY63 956 aa11.51□□□□□ -0.57
PDGFRA-207ENST00000509092 ERCC4Q92889 916 aaPredicted RBP11.51□□□□□ -0.57
PDGFRA-207ENST00000509092 KCNB2Q92953 911 aa11.51□□□□□ -0.57
PDGFRA-207ENST00000509092 ITFG2Q969R8 447 aa11.51□□□□□ -0.57
PDGFRA-207ENST00000509092 XAGE2Q96GT9 111 aa11.51□□□□□ -0.57
PDGFRA-207ENST00000509092 VIPAS39Q9H9C1 493 aa11.51□□□□□ -0.57
PDGFRA-207ENST00000509092 SUGCTQ9HAC7 445 aa11.51□□□□□ -0.57
PDGFRA-207ENST00000509092 TPCN1Q9ULQ1 816 aa11.51□□□□□ -0.57
PDGFRA-207ENST00000509092 RIMS2Q9UQ26 1411 aa11.51□□□□□ -0.57
PDGFRA-207ENST00000509092 FER1L4A9Z1Z3 1794 aa11.51□□□□□ -0.57
PDGFRA-207ENST00000509092 WWC2Q6AWC2 1192 aa11.51□□□□□ -0.57
PDGFRA-207ENST00000509092 GGNBP2Q9H3C7 697 aa11.51□□□□□ -0.57
PDGFRA-207ENST00000509092 GOLPH3LQ9H4A5 285 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms