RNA–Protein interactions for RNA: ENST00000509043.1

HTT-205, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 380 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-205ENST00000509043 NCLP19338 710 aaKnown RBP10.98□□□□□ -0.65
HTT-205ENST00000509043 PKP1Q13835 747 aa10.98□□□□□ -0.65
HTT-205ENST00000509043 DHX32Q7L7V1 743 aaKnown RBP10.98□□□□□ -0.65
HTT-205ENST00000509043 SYAP1Q96A49 352 aaPredicted RBP10.98□□□□□ -0.65
HTT-205ENST00000509043 USP21Q9UK80 565 aa10.98□□□□□ -0.65
HTT-205ENST00000509043 KIF3AQ9Y496 699 aa10.98□□□□□ -0.65
HTT-205ENST00000509043 WDR19Q8NEZ3 1342 aa10.98□□□□□ -0.65
HTT-205ENST00000509043 A0A0G2JS52 829 aa10.97□□□□□ -0.65
HTT-205ENST00000509043 ZBTB22O15209 634 aa10.97□□□□□ -0.65
HTT-205ENST00000509043 IGSF3O75054 1194 aa10.97□□□□□ -0.65
HTT-205ENST00000509043 SYT1P21579 422 aa10.97□□□□□ -0.65
HTT-205ENST00000509043 ADORA1P30542 326 aa10.97□□□□□ -0.65
HTT-205ENST00000509043 ZNF445P59923 1031 aa10.97□□□□□ -0.65
HTT-205ENST00000509043 SF3B3Q15393 1217 aaKnown RBP10.97□□□□□ -0.65
HTT-205ENST00000509043 ME3Q16798 604 aa10.97□□□□□ -0.65
HTT-205ENST00000509043 IMMTQ16891 758 aaKnown RBP10.97□□□□□ -0.65
HTT-205ENST00000509043 SLC10A5Q5PT55 438 aa10.97□□□□□ -0.65
HTT-205ENST00000509043 TMED8Q6PL24 325 aaPredicted RBP10.97□□□□□ -0.65
HTT-205ENST00000509043 AGXT2Q9BYV1 514 aa10.97□□□□□ -0.65
HTT-205ENST00000509043 TPCN1Q9ULQ1 816 aa10.97□□□□□ -0.65
HTT-205ENST00000509043 SCN7AQ01118 1682 aa10.97□□□□□ -0.65
HTT-205ENST00000509043 ZMYM6O95789 1325 aa10.96□□□□□ -0.65
HTT-205ENST00000509043 ONECUT3O60422 494 aaPredicted RBP10.96□□□□□ -0.65
HTT-205ENST00000509043 PRPF40AO75400 957 aaKnown RBP10.96□□□□□ -0.65
HTT-205ENST00000509043 RPS6KA4O75676 772 aa10.96□□□□□ -0.65
HTT-205ENST00000509043 F13A1P00488 732 aa10.96□□□□□ -0.65
HTT-205ENST00000509043 GJB2P29033 226 aa10.96□□□□□ -0.65
HTT-205ENST00000509043 ZAP70P43403 619 aa10.96□□□□□ -0.65
HTT-205ENST00000509043 TOB2Q14106 344 aaPredicted RBP10.96□□□□□ -0.65
HTT-205ENST00000509043 WASHC4Q2M389 1173 aa10.96□□□□□ -0.65
HTT-205ENST00000509043 CCDC102BQ68D86 513 aa10.96□□□□□ -0.65
HTT-205ENST00000509043 CCDC83Q8IWF9 413 aa10.96□□□□□ -0.65
HTT-205ENST00000509043 SYNE4Q8N205 404 aa10.96□□□□□ -0.65
HTT-205ENST00000509043 RGS22Q8NE09 1264 aa10.96□□□□□ -0.65
HTT-205ENST00000509043 CCDC85AQ96PX6 553 aaPredicted RBP10.96□□□□□ -0.65
HTT-205ENST00000509043 SEC62Q99442 399 aaKnown RBP10.96□□□□□ -0.65
HTT-205ENST00000509043 NARFQ9UHQ1 456 aa10.96□□□□□ -0.65
HTT-205ENST00000509043 NDUFB9Q9Y6M9 179 aa10.96□□□□□ -0.65
HTT-205ENST00000509043 DDX60Q8IY21 1712 aaKnown RBP10.95□□□□□ -0.66
HTT-205ENST00000509043 KCNQ2O43526 872 aa10.95□□□□□ -0.66
HTT-205ENST00000509043 PHF14O94880 888 aa10.95□□□□□ -0.66
HTT-205ENST00000509043 HCLS1P14317 486 aaPredicted RBP10.95□□□□□ -0.66
HTT-205ENST00000509043 CPA1P15085 419 aa10.95□□□□□ -0.66
HTT-205ENST00000509043 ADD2P35612 726 aa10.95□□□□□ -0.66
HTT-205ENST00000509043 MCAMP43121 646 aa10.95□□□□□ -0.66
HTT-205ENST00000509043 FGD1P98174 961 aa10.95□□□□□ -0.66
HTT-205ENST00000509043 EXOSC10Q01780 885 aaKnown RBP10.95□□□□□ -0.66
HTT-205ENST00000509043 CCDC129Q6ZRS4 1044 aa10.95□□□□□ -0.66
HTT-205ENST00000509043 LINC00116Q8NCU8 138 aa10.95□□□□□ -0.66
HTT-205ENST00000509043 GTF3C6Q969F1 213 aa10.95□□□□□ -0.66
HTT-205ENST00000509043 OSBP2Q969R2 916 aa10.95□□□□□ -0.66
HTT-205ENST00000509043 GZF1Q9H116 711 aaPredicted RBP10.95□□□□□ -0.66
HTT-205ENST00000509043 KAT6BQ8WYB5 2073 aa10.94□□□□□ -0.66
HTT-205ENST00000509043 MYH14Q7Z406 1995 aaKnown RBP10.94□□□□□ -0.66
HTT-205ENST00000509043 CARMIL3Q8ND23 1372 aa10.94□□□□□ -0.66
HTT-205ENST00000509043 E7EWF7 191 aa10.94□□□□□ -0.66
HTT-205ENST00000509043 PFKFB2O60825 505 aa10.94□□□□□ -0.66
HTT-205ENST00000509043 LARGE1O95461 756 aa10.94□□□□□ -0.66
HTT-205ENST00000509043 GNAT2P19087 354 aa10.94□□□□□ -0.66
HTT-205ENST00000509043 EVCP57679 992 aa10.94□□□□□ -0.66
HTT-205ENST00000509043 HMGN5P82970 282 aaKnown RBP10.94□□□□□ -0.66
HTT-205ENST00000509043 MAP3K12Q12852 859 aa10.94□□□□□ -0.66
HTT-205ENST00000509043 ALX1Q15699 326 aa10.94□□□□□ -0.66
HTT-205ENST00000509043 SPATA5Q8NB90 893 aa10.94□□□□□ -0.66
HTT-205ENST00000509043 ZNF274Q96GC6 653 aaPredicted RBP10.94□□□□□ -0.66
HTT-205ENST00000509043 GJD4Q96KN9 370 aaPredicted RBP10.94□□□□□ -0.66
HTT-205ENST00000509043 GRPEL1Q9HAV7 217 aa10.94□□□□□ -0.66
HTT-205ENST00000509043 GNL3LQ9NVN8 582 aaKnown RBP10.94□□□□□ -0.66
HTT-205ENST00000509043 MTMR6Q9Y217 621 aa10.94□□□□□ -0.66
HTT-205ENST00000509043 M0R2C6 588 aa10.93□□□□□ -0.66
HTT-205ENST00000509043 SEMA3EO15041 775 aa10.93□□□□□ -0.66
HTT-205ENST00000509043 ZPR1O75312 459 aa10.93□□□□□ -0.66
HTT-205ENST00000509043 LETM1O95202 739 aaPredicted RBP10.93□□□□□ -0.66
HTT-205ENST00000509043 UBE4AQ14139 1066 aa10.93□□□□□ -0.66
HTT-205ENST00000509043 SCARF1Q14162 830 aa10.93□□□□□ -0.66
HTT-205ENST00000509043 SLC9C2Q5TAH2 1124 aa10.93□□□□□ -0.66
HTT-205ENST00000509043 MEX3CQ5U5Q3 659 aaKnown RBP10.93□□□□□ -0.66
HTT-205ENST00000509043 LARP1BQ659C4 914 aaKnown RBP10.93□□□□□ -0.66
HTT-205ENST00000509043 Q6ZUG5 572 aa10.93□□□□□ -0.66
HTT-205ENST00000509043 ANKRD18AQ8IVF6 992 aa10.93□□□□□ -0.66
HTT-205ENST00000509043 BSDC1Q9NW68 430 aaPredicted RBP10.93□□□□□ -0.66
HTT-205ENST00000509043 TRPC5Q9UL62 973 aaPredicted RBP10.93□□□□□ -0.66
HTT-205ENST00000509043 RTCBQ9Y3I0 505 aaKnown RBP10.93□□□□□ -0.66
HTT-205ENST00000509043 MYH7P12883 1935 aa10.92□□□□□ -0.66
HTT-205ENST00000509043 AKAP11Q9UKA4 1901 aa10.92□□□□□ -0.66
HTT-205ENST00000509043 PDS5AQ29RF7 1337 aaKnown RBP10.92□□□□□ -0.66
HTT-205ENST00000509043 ZNF213O14771 459 aa10.92□□□□□ -0.66
HTT-205ENST00000509043 GPAA1O43292 621 aa10.92□□□□□ -0.66
HTT-205ENST00000509043 DHX16O60231 1041 aaKnown RBP10.92□□□□□ -0.66
HTT-205ENST00000509043 MCM5P33992 734 aa10.92□□□□□ -0.66
HTT-205ENST00000509043 PHKA1P46020 1223 aa10.92□□□□□ -0.66
HTT-205ENST00000509043 UBE2HP62256 183 aa10.92□□□□□ -0.66
HTT-205ENST00000509043 ST3GAL1Q11201 340 aa10.92□□□□□ -0.66
HTT-205ENST00000509043 NCOA7Q8NI08 942 aa10.92□□□□□ -0.66
HTT-205ENST00000509043 CERKQ8TCT0 537 aa10.92□□□□□ -0.66
HTT-205ENST00000509043 SETDB2Q96T68 719 aa10.92□□□□□ -0.66
HTT-205ENST00000509043 ZSCAN16Q9H4T2 348 aaPredicted RBP10.92□□□□□ -0.66
HTT-205ENST00000509043 CCNL1Q9UK58 526 aaPredicted RBP10.92□□□□□ -0.66
HTT-205ENST00000509043 BTAF1O14981 1849 aa10.92□□□□□ -0.66
HTT-205ENST00000509043 COL24A1Q17RW2 1714 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms