RNA–Protein interactions for RNA: ENST00000508854.1

SH3D21-206, Transcript of SH3 domain containing 21, humanhuman

TSL 5

Gene SH3D21, Length 1,134 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-206ENST00000508854 LEMD3Q9Y2U8 911 aa12.87□□□□□ -0.35
SH3D21-206ENST00000508854 APAF1O14727 1248 aa12.86□□□□□ -0.35
SH3D21-206ENST00000508854 IGHMBP2P38935 993 aaKnown RBP12.86□□□□□ -0.35
SH3D21-206ENST00000508854 SREBF2Q12772 1141 aa12.86□□□□□ -0.35
SH3D21-206ENST00000508854 NOM1Q5C9Z4 860 aaKnown RBP12.86□□□□□ -0.35
SH3D21-206ENST00000508854 KSR2Q6VAB6 950 aa12.86□□□□□ -0.35
SH3D21-206ENST00000508854 MINPP1Q9UNW1 487 aa12.86□□□□□ -0.35
SH3D21-206ENST00000508854 MAP3K2Q9Y2U5 619 aa12.86□□□□□ -0.35
SH3D21-206ENST00000508854 COL4A1P02462 1669 aa12.86□□□□□ -0.35
SH3D21-206ENST00000508854 UBE2Q2LH0YL09 131 aa12.85□□□□□ -0.35
SH3D21-206ENST00000508854 TM4SF4P48230 202 aa12.85□□□□□ -0.35
SH3D21-206ENST00000508854 CCT4P50991 539 aaKnown RBP12.85□□□□□ -0.35
SH3D21-206ENST00000508854 SOX10P56693 466 aa12.85□□□□□ -0.35
SH3D21-206ENST00000508854 ARMC9Q7Z3E5 817 aa12.85□□□□□ -0.35
SH3D21-206ENST00000508854 C8orf58Q8NAV2 365 aa12.85□□□□□ -0.35
SH3D21-206ENST00000508854 TTLL11Q8NHH1 800 aa12.85□□□□□ -0.35
SH3D21-206ENST00000508854 ANKRD2Q9GZV1 360 aa12.85□□□□□ -0.35
SH3D21-206ENST00000508854 PI4KAP2A4QPH2 592 aa12.84□□□□□ -0.35
SH3D21-206ENST00000508854 WNT10BO00744 389 aa12.84□□□□□ -0.35
SH3D21-206ENST00000508854 NBPF9Q3BBW0 867 aa12.84□□□□□ -0.35
SH3D21-206ENST00000508854 DACT2Q5SW24 774 aa12.84□□□□□ -0.35
SH3D21-206ENST00000508854 APOBEC3FQ8IUX4 373 aaKnown RBP12.84□□□□□ -0.35
SH3D21-206ENST00000508854 PI4KAP1Q8N8J0 262 aa12.84□□□□□ -0.35
SH3D21-206ENST00000508854 JARID2Q92833 1246 aaPredicted RBP12.84□□□□□ -0.35
SH3D21-206ENST00000508854 FBXW7Q969H0 707 aa12.84□□□□□ -0.35
SH3D21-206ENST00000508854 HPS5Q9UPZ3 1129 aa12.84□□□□□ -0.35
SH3D21-206ENST00000508854 PDE4DIPQ5VU43 2346 aa12.84□□□□□ -0.35
SH3D21-206ENST00000508854 ALDH1A1P00352 501 aa12.83□□□□□ -0.36
SH3D21-206ENST00000508854 INHBEP58166 350 aa12.83□□□□□ -0.36
SH3D21-206ENST00000508854 TTLL5Q6EMB2 1281 aa12.83□□□□□ -0.36
SH3D21-206ENST00000508854 ZNF296Q8WUU4 475 aaPredicted RBP12.83□□□□□ -0.36
SH3D21-206ENST00000508854 MPHOSPH8Q99549 860 aa12.83□□□□□ -0.36
SH3D21-206ENST00000508854 GREM2Q9H772 168 aa12.83□□□□□ -0.36
SH3D21-206ENST00000508854 MYH3P11055 1940 aa12.82□□□□□ -0.36
SH3D21-206ENST00000508854 GPR25O00155 361 aa12.82□□□□□ -0.36
SH3D21-206ENST00000508854 TBC1D8O95759 1140 aa12.82□□□□□ -0.36
SH3D21-206ENST00000508854 IGKV5-2P06315 115 aa12.82□□□□□ -0.36
SH3D21-206ENST00000508854 PRPF38BQ5VTL8 546 aaKnown RBP12.82□□□□□ -0.36
SH3D21-206ENST00000508854 CFHR5Q9BXR6 569 aa12.82□□□□□ -0.36
SH3D21-206ENST00000508854 PRKRIP1Q9H875 184 aaPredicted RBP12.82□□□□□ -0.36
SH3D21-206ENST00000508854 ZNF804BA4D1E1 1349 aa12.82□□□□□ -0.36
SH3D21-206ENST00000508854 NEURL1BA8MQ27 555 aa12.81□□□□□ -0.36
SH3D21-206ENST00000508854 H7C1W4 665 aa12.81□□□□□ -0.36
SH3D21-206ENST00000508854 KCNJ4P48050 445 aa12.81□□□□□ -0.36
SH3D21-206ENST00000508854 PRAMEF18Q5VWM3 479 aa12.81□□□□□ -0.36
SH3D21-206ENST00000508854 FBXO46Q6PJ61 603 aaPredicted RBP12.81□□□□□ -0.36
SH3D21-206ENST00000508854 MOB2Q70IA6 237 aa12.81□□□□□ -0.36
SH3D21-206ENST00000508854 PLA2G12BQ9BX93 195 aa12.81□□□□□ -0.36
SH3D21-206ENST00000508854 MYH16Q9H6N6 1097 aa12.81□□□□□ -0.36
SH3D21-206ENST00000508854 COL1A1P02452 1464 aaPredicted RBP12.8□□□□□ -0.36
SH3D21-206ENST00000508854 UNCXA6NJT0 531 aa12.8□□□□□ -0.36
SH3D21-206ENST00000508854 PPP1R12BO60237 982 aaPredicted RBP12.8□□□□□ -0.36
SH3D21-206ENST00000508854 FKTNO75072 461 aa12.8□□□□□ -0.36
SH3D21-206ENST00000508854 UBE3BQ7Z3V4 1068 aa12.8□□□□□ -0.36
SH3D21-206ENST00000508854 PPP2R3BQ9Y5P8 575 aa12.8□□□□□ -0.36
SH3D21-206ENST00000508854 MANSC4A6NHS7 340 aaPredicted RBP12.79□□□□□ -0.36
SH3D21-206ENST00000508854 MYO1BO43795 1136 aa12.79□□□□□ -0.36
SH3D21-206ENST00000508854 SLC4A2P04920 1241 aa12.79□□□□□ -0.36
SH3D21-206ENST00000508854 ITGA6P23229 1130 aa12.79□□□□□ -0.36
SH3D21-206ENST00000508854 PTPN12Q05209 780 aaKnown RBP12.79□□□□□ -0.36
SH3D21-206ENST00000508854 DLGAP5Q15398 846 aa12.79□□□□□ -0.36
SH3D21-206ENST00000508854 CCDC27Q2M243 656 aa12.79□□□□□ -0.36
SH3D21-206ENST00000508854 CWF19L2Q2TBE0 894 aaKnown RBP12.79□□□□□ -0.36
SH3D21-206ENST00000508854 TWISTNBQ3B726 338 aaPredicted RBP12.79□□□□□ -0.36
SH3D21-206ENST00000508854 KIAA0825Q8IV33 1275 aa12.79□□□□□ -0.36
SH3D21-206ENST00000508854 SLC10A4Q96EP9 437 aa12.79□□□□□ -0.36
SH3D21-206ENST00000508854 MXD3Q9BW11 206 aa12.79□□□□□ -0.36
SH3D21-206ENST00000508854 SCAF8Q9UPN6 1271 aaKnown RBP12.79□□□□□ -0.36
SH3D21-206ENST00000508854 SASH1O94885 1247 aa12.78□□□□□ -0.36
SH3D21-206ENST00000508854 CSF1RP07333 972 aa12.78□□□□□ -0.36
SH3D21-206ENST00000508854 GTF2IP78347 998 aa12.78□□□□□ -0.36
SH3D21-206ENST00000508854 GCKRQ14397 625 aa12.78□□□□□ -0.36
SH3D21-206ENST00000508854 SUPT20HL1Q3ZLR7 823 aa12.78□□□□□ -0.36
SH3D21-206ENST00000508854 LDLRAD1Q5T700 205 aa12.78□□□□□ -0.36
SH3D21-206ENST00000508854 SPRYD7Q5W111 196 aa12.78□□□□□ -0.36
SH3D21-206ENST00000508854 OTUD7BQ6GQQ9 843 aa12.78□□□□□ -0.36
SH3D21-206ENST00000508854 TSPYL6Q8N831 410 aa12.78□□□□□ -0.36
SH3D21-206ENST00000508854 MTMR14Q8NCE2 650 aa12.78□□□□□ -0.36
SH3D21-206ENST00000508854 ANGEL1Q9UNK9 670 aaKnown RBP12.78□□□□□ -0.36
SH3D21-206ENST00000508854 SPEF2Q9C093 1822 aa12.77□□□□□ -0.37
SH3D21-206ENST00000508854 ANKRD18BA2A2Z9 1011 aa12.77□□□□□ -0.37
SH3D21-206ENST00000508854 WTIPA6NIX2 430 aaPredicted RBP12.77□□□□□ -0.37
SH3D21-206ENST00000508854 ZBTB48P10074 688 aaPredicted RBP12.77□□□□□ -0.37
SH3D21-206ENST00000508854 FKBP1AP62942 108 aaKnown RBP12.77□□□□□ -0.37
SH3D21-206ENST00000508854 MKRN3Q13064 507 aaKnown RBP12.77□□□□□ -0.37
SH3D21-206ENST00000508854 INTS3Q68E01 1043 aaKnown RBP12.77□□□□□ -0.37
SH3D21-206ENST00000508854 C15orf52Q6ZUT6 534 aaKnown RBP12.77□□□□□ -0.37
SH3D21-206ENST00000508854 TXNRD3Q86VQ6 643 aa12.77□□□□□ -0.37
SH3D21-206ENST00000508854 LINS1Q8NG48 757 aa12.77□□□□□ -0.37
SH3D21-206ENST00000508854 GCC1Q96CN9 775 aa12.77□□□□□ -0.37
SH3D21-206ENST00000508854 ZBED3Q96IU2 234 aaPredicted RBP12.77□□□□□ -0.37
SH3D21-206ENST00000508854 DEFB129Q9H1M3 183 aa12.77□□□□□ -0.37
SH3D21-206ENST00000508854 CD209Q9NNX6 404 aa12.77□□□□□ -0.37
SH3D21-206ENST00000508854 CHRNDQ07001 517 aa12.76□□□□□ -0.37
SH3D21-206ENST00000508854 PRKG1Q13976 671 aa12.76□□□□□ -0.37
SH3D21-206ENST00000508854 MAP3K11Q16584 847 aa12.76□□□□□ -0.37
SH3D21-206ENST00000508854 NCBP3Q53F19 620 aaKnown RBP12.76□□□□□ -0.37
SH3D21-206ENST00000508854 ZNF804AQ7Z570 1209 aa12.76□□□□□ -0.37
SH3D21-206ENST00000508854 DNAAF4Q8WXU2 420 aa12.76□□□□□ -0.37
SH3D21-206ENST00000508854 IL16Q14005 1332 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms