RNA–Protein interactions for RNA: ENST00000508818.5

UBE2D3-227, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-227ENST00000508818 PLA2G12BQ9BX93 195 aa12.81□□□□□ -0.36
UBE2D3-227ENST00000508818 WBP1LQ9NX94 342 aa12.81□□□□□ -0.36
UBE2D3-227ENST00000508818 LEMD3Q9Y2U8 911 aa12.81□□□□□ -0.36
UBE2D3-227ENST00000508818 COL4A1P02462 1669 aa12.8□□□□□ -0.36
UBE2D3-227ENST00000508818 USP17L8P0C7I0 530 aa12.8□□□□□ -0.36
UBE2D3-227ENST00000508818 FAM161AQ3B820 660 aa12.8□□□□□ -0.36
UBE2D3-227ENST00000508818 SLC4A10Q6U841 1118 aa12.8□□□□□ -0.36
UBE2D3-227ENST00000508818 SULF1Q8IWU6 871 aa12.8□□□□□ -0.36
UBE2D3-227ENST00000508818 C9orf78Q9NZ63 289 aaPredicted RBP12.8□□□□□ -0.36
UBE2D3-227ENST00000508818 CSF1RP07333 972 aa12.79□□□□□ -0.36
UBE2D3-227ENST00000508818 IFIT5Q13325 482 aaKnown RBP12.79□□□□□ -0.36
UBE2D3-227ENST00000508818 TAF7LQ5H9L4 462 aa12.79□□□□□ -0.36
UBE2D3-227ENST00000508818 BEND3Q5T5X7 828 aa12.79□□□□□ -0.36
UBE2D3-227ENST00000508818 SAPCD2Q86UD0 394 aa12.79□□□□□ -0.36
UBE2D3-227ENST00000508818 OGFOD1Q8N543 542 aa12.79□□□□□ -0.36
UBE2D3-227ENST00000508818 C2orf69Q8N8R5 385 aa12.79□□□□□ -0.36
UBE2D3-227ENST00000508818 PRDM10Q9NQV6 1147 aa12.79□□□□□ -0.36
UBE2D3-227ENST00000508818 CACNA1FO60840 1977 aa12.79□□□□□ -0.36
UBE2D3-227ENST00000508818 ZNF804BA4D1E1 1349 aa12.79□□□□□ -0.36
UBE2D3-227ENST00000508818 TRPM7Q96QT4 1865 aa12.78□□□□□ -0.36
UBE2D3-227ENST00000508818 EGFRP00533 1210 aa12.78□□□□□ -0.36
UBE2D3-227ENST00000508818 MAP2K2P36507 400 aa12.78□□□□□ -0.36
UBE2D3-227ENST00000508818 LBX1P52954 281 aa12.78□□□□□ -0.36
UBE2D3-227ENST00000508818 CASP7P55210 303 aa12.78□□□□□ -0.36
UBE2D3-227ENST00000508818 HUNKP57058 714 aa12.78□□□□□ -0.36
UBE2D3-227ENST00000508818 SCARF1Q14162 830 aa12.78□□□□□ -0.36
UBE2D3-227ENST00000508818 COA1Q9GZY4 146 aa12.78□□□□□ -0.36
UBE2D3-227ENST00000508818 MED23Q9ULK4 1368 aa12.78□□□□□ -0.36
UBE2D3-227ENST00000508818 WTIPA6NIX2 430 aaPredicted RBP12.77□□□□□ -0.37
UBE2D3-227ENST00000508818 ADM5C9JUS6 153 aa12.77□□□□□ -0.37
UBE2D3-227ENST00000508818 ZNF280AP59817 542 aaPredicted RBP12.77□□□□□ -0.37
UBE2D3-227ENST00000508818 CCDC57Q2TAC2 916 aa12.77□□□□□ -0.37
UBE2D3-227ENST00000508818 HHIPL1Q96JK4 782 aa12.77□□□□□ -0.37
UBE2D3-227ENST00000508818 SRCIN1Q9C0H9 1055 aa12.77□□□□□ -0.37
UBE2D3-227ENST00000508818 MYOZ2Q9NPC6 264 aa12.77□□□□□ -0.37
UBE2D3-227ENST00000508818 GGA3Q9NZ52 723 aa12.77□□□□□ -0.37
UBE2D3-227ENST00000508818 MYH3P11055 1940 aa12.77□□□□□ -0.37
UBE2D3-227ENST00000508818 GRM8O00222 908 aa12.76□□□□□ -0.37
UBE2D3-227ENST00000508818 AOC2O75106 756 aa12.76□□□□□ -0.37
UBE2D3-227ENST00000508818 ALDH1L1O75891 902 aa12.76□□□□□ -0.37
UBE2D3-227ENST00000508818 CHRNDQ07001 517 aa12.76□□□□□ -0.37
UBE2D3-227ENST00000508818 STRIP1Q5VSL9 837 aa12.76□□□□□ -0.37
UBE2D3-227ENST00000508818 ANGEL2Q5VTE6 544 aaKnown RBP12.76□□□□□ -0.37
UBE2D3-227ENST00000508818 TTLL5Q6EMB2 1281 aa12.76□□□□□ -0.37
UBE2D3-227ENST00000508818 LMBR1LQ6UX01 489 aa12.76□□□□□ -0.37
UBE2D3-227ENST00000508818 DLK2Q6UY11 383 aa12.76□□□□□ -0.37
UBE2D3-227ENST00000508818 CHRDL2Q6WN34 429 aa12.76□□□□□ -0.37
UBE2D3-227ENST00000508818 GBA2Q9HCG7 927 aaPredicted RBP12.76□□□□□ -0.37
UBE2D3-227ENST00000508818 MYO3BQ8WXR4 1341 aa12.76□□□□□ -0.37
UBE2D3-227ENST00000508818 E9PSI1 815 aa12.75□□□□□ -0.37
UBE2D3-227ENST00000508818 FOXO4P98177 505 aa12.75□□□□□ -0.37
UBE2D3-227ENST00000508818 HELBQ8NG08 1087 aaPredicted RBP12.75□□□□□ -0.37
UBE2D3-227ENST00000508818 GMLQ99445 158 aa12.75□□□□□ -0.37
UBE2D3-227ENST00000508818 CNNM1Q9NRU3 951 aa12.75□□□□□ -0.37
UBE2D3-227ENST00000508818 HDAC9Q9UKV0 1011 aa12.75□□□□□ -0.37
UBE2D3-227ENST00000508818 PCNTO95613 3336 aa12.74□□□□□ -0.37
UBE2D3-227ENST00000508818 PLIN1O60240 522 aa12.74□□□□□ -0.37
UBE2D3-227ENST00000508818 TAF5LO75529 589 aa12.74□□□□□ -0.37
UBE2D3-227ENST00000508818 HSPA8P11142 646 aaKnown RBP12.74□□□□□ -0.37
UBE2D3-227ENST00000508818 MMP14P50281 582 aa12.74□□□□□ -0.37
UBE2D3-227ENST00000508818 NOGQ13253 232 aa12.74□□□□□ -0.37
UBE2D3-227ENST00000508818 DACT2Q5SW24 774 aa12.74□□□□□ -0.37
UBE2D3-227ENST00000508818 RGMBQ6NW40 437 aa12.74□□□□□ -0.37
UBE2D3-227ENST00000508818 LDHAL6AQ6ZMR3 332 aa12.74□□□□□ -0.37
UBE2D3-227ENST00000508818 TXNRD3Q86VQ6 643 aa12.74□□□□□ -0.37
UBE2D3-227ENST00000508818 CCDC102AQ96A19 550 aa12.74□□□□□ -0.37
UBE2D3-227ENST00000508818 CDCA5Q96FF9 252 aa12.74□□□□□ -0.37
UBE2D3-227ENST00000508818 MXD3Q9BW11 206 aa12.74□□□□□ -0.37
UBE2D3-227ENST00000508818 SCN9AQ15858 1988 aa12.74□□□□□ -0.37
UBE2D3-227ENST00000508818 ASTN2O75129 1339 aaPredicted RBP12.73□□□□□ -0.37
UBE2D3-227ENST00000508818 CA12O43570 354 aa12.73□□□□□ -0.37
UBE2D3-227ENST00000508818 ZNF157P51786 506 aaPredicted RBP12.73□□□□□ -0.37
UBE2D3-227ENST00000508818 GTF2IP78347 998 aa12.73□□□□□ -0.37
UBE2D3-227ENST00000508818 ZNF804AQ7Z570 1209 aa12.73□□□□□ -0.37
UBE2D3-227ENST00000508818 ZNF594Q96JF6 807 aaPredicted RBP12.73□□□□□ -0.37
UBE2D3-227ENST00000508818 CD209Q9NNX6 404 aa12.73□□□□□ -0.37
UBE2D3-227ENST00000508818 SPEF2Q9C093 1822 aa12.73□□□□□ -0.37
UBE2D3-227ENST00000508818 POLR2AP24928 1970 aaKnown RBP12.72□□□□□ -0.37
UBE2D3-227ENST00000508818 ZNF521Q96K83 1311 aa12.72□□□□□ -0.37
UBE2D3-227ENST00000508818 KLRK1P26718 216 aa12.72□□□□□ -0.37
UBE2D3-227ENST00000508818 BRPF1P55201 1214 aaPredicted RBP12.72□□□□□ -0.37
UBE2D3-227ENST00000508818 EPHA10Q5JZY3 1008 aa12.72□□□□□ -0.37
UBE2D3-227ENST00000508818 KIAA0825Q8IV33 1275 aa12.72□□□□□ -0.37
UBE2D3-227ENST00000508818 MRPL50Q8N5N7 158 aaKnown RBP12.72□□□□□ -0.37
UBE2D3-227ENST00000508818 ZNF609O15014 1411 aa12.71□□□□□ -0.37
UBE2D3-227ENST00000508818 PTPRCP08575 1304 aa12.71□□□□□ -0.37
UBE2D3-227ENST00000508818 PITPNM2Q9BZ72 1349 aa12.71□□□□□ -0.37
UBE2D3-227ENST00000508818 NF2P35240 595 aa12.71□□□□□ -0.37
UBE2D3-227ENST00000508818 SLFN5Q08AF3 891 aa12.71□□□□□ -0.37
UBE2D3-227ENST00000508818 TTLL12Q14166 644 aaPredicted RBP12.71□□□□□ -0.37
UBE2D3-227ENST00000508818 NBPF9Q3BBW0 867 aa12.71□□□□□ -0.37
UBE2D3-227ENST00000508818 SPDYE2BA6NHP3 402 aa12.7□□□□□ -0.38
UBE2D3-227ENST00000508818 SNAP23O00161 211 aa12.7□□□□□ -0.38
UBE2D3-227ENST00000508818 NBPF7P0C2Y1 421 aaPredicted RBP12.7□□□□□ -0.38
UBE2D3-227ENST00000508818 SPDYE6P0CI01 402 aa12.7□□□□□ -0.38
UBE2D3-227ENST00000508818 FKBP1BP68106 108 aa12.7□□□□□ -0.38
UBE2D3-227ENST00000508818 SPDYE2Q495Y8 402 aa12.7□□□□□ -0.38
UBE2D3-227ENST00000508818 SSH1Q8WYL5 1049 aa12.7□□□□□ -0.38
UBE2D3-227ENST00000508818 TSKSQ9UJT2 592 aa12.7□□□□□ -0.38
UBE2D3-227ENST00000508818 WNT10BO00744 389 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 121.7 ms