RNA–Protein interactions for RNA: ENST00000508550.5

CCSER1-207, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 3

Gene CCSER1, Length 716 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-207ENST00000508550 PDE4DQ08499 809 aa10.07□□□□□ -0.8
CCSER1-207ENST00000508550 ZNF496Q96IT1 587 aaPredicted RBP10.07□□□□□ -0.8
CCSER1-207ENST00000508550 DCTPP1Q9H773 170 aa10.07□□□□□ -0.8
CCSER1-207ENST00000508550 TMOD3Q9NYL9 352 aa10.07□□□□□ -0.8
CCSER1-207ENST00000508550 CHPF2Q9P2E5 772 aa10.07□□□□□ -0.8
CCSER1-207ENST00000508550 WASF2Q9Y6W5 498 aa10.07□□□□□ -0.8
CCSER1-207ENST00000508550 PHLPP1O60346 1717 aa10.07□□□□□ -0.8
CCSER1-207ENST00000508550 UTYO14607 1347 aa10.07□□□□□ -0.8
CCSER1-207ENST00000508550 PLCH1Q4KWH8 1693 aa10.06□□□□□ -0.8
CCSER1-207ENST00000508550 KCNQ3O43525 872 aa10.06□□□□□ -0.8
CCSER1-207ENST00000508550 F12P00748 615 aaPredicted RBP10.06□□□□□ -0.8
CCSER1-207ENST00000508550 PIP4K2BP78356 416 aa10.06□□□□□ -0.8
CCSER1-207ENST00000508550 MTX1Q13505 466 aa10.06□□□□□ -0.8
CCSER1-207ENST00000508550 DDB1Q16531 1140 aa10.06□□□□□ -0.8
CCSER1-207ENST00000508550 LINC01559Q495D7 138 aa10.06□□□□□ -0.8
CCSER1-207ENST00000508550 BEND3Q5T5X7 828 aa10.06□□□□□ -0.8
CCSER1-207ENST00000508550 G2E3Q7L622 706 aa10.06□□□□□ -0.8
CCSER1-207ENST00000508550 LINS1Q8NG48 757 aa10.06□□□□□ -0.8
CCSER1-207ENST00000508550 NWD2Q9ULI1 1742 aa10.06□□□□□ -0.8
CCSER1-207ENST00000508550 CACNA1FO60840 1977 aa10.06□□□□□ -0.8
CCSER1-207ENST00000508550 STARD3NLO95772 234 aa10.05□□□□□ -0.8
CCSER1-207ENST00000508550 EIF2S2P20042 333 aaKnown RBP10.05□□□□□ -0.8
CCSER1-207ENST00000508550 CEP85Q6P2H3 762 aa10.05□□□□□ -0.8
CCSER1-207ENST00000508550 LRP10Q7Z4F1 713 aa10.05□□□□□ -0.8
CCSER1-207ENST00000508550 SIPA1L3O60292 1781 aaPredicted RBP10.05□□□□□ -0.8
CCSER1-207ENST00000508550 SCN11AQ9UI33 1791 aa10.04□□□□□ -0.8
CCSER1-207ENST00000508550 PI4KAP2A4QPH2 592 aa10.04□□□□□ -0.8
CCSER1-207ENST00000508550 TERTO14746 1132 aaKnown RBP10.04□□□□□ -0.8
CCSER1-207ENST00000508550 CAPN5O15484 640 aaPredicted RBP10.04□□□□□ -0.8
CCSER1-207ENST00000508550 ATP8B2P98198 1209 aa10.04□□□□□ -0.8
CCSER1-207ENST00000508550 NEXNQ0ZGT2 675 aa10.04□□□□□ -0.8
CCSER1-207ENST00000508550 HSP90AB4PQ58FF6 505 aa10.04□□□□□ -0.8
CCSER1-207ENST00000508550 PI4KAP1Q8N8J0 262 aa10.04□□□□□ -0.8
CCSER1-207ENST00000508550 DDX54Q8TDD1 881 aaKnown RBP10.04□□□□□ -0.8
CCSER1-207ENST00000508550 BACH2Q9BYV9 841 aa10.04□□□□□ -0.8
CCSER1-207ENST00000508550 USP44Q9H0E7 712 aa10.04□□□□□ -0.8
CCSER1-207ENST00000508550 BCL9LQ86UU0 1499 aa10.04□□□□□ -0.8
CCSER1-207ENST00000508550 RGPD2P0DJD1 1756 aa10.03□□□□□ -0.8
CCSER1-207ENST00000508550 RGPD5Q99666 1765 aa10.03□□□□□ -0.8
CCSER1-207ENST00000508550 WIPF1O43516 503 aa10.03□□□□□ -0.8
CCSER1-207ENST00000508550 RAB11FIP3O75154 756 aa10.03□□□□□ -0.8
CCSER1-207ENST00000508550 ADAMTS2O95450 1211 aa10.03□□□□□ -0.8
CCSER1-207ENST00000508550 UBTFL1P0CB47 393 aaPredicted RBP10.03□□□□□ -0.8
CCSER1-207ENST00000508550 TRIM28Q13263 835 aaKnown RBP10.03□□□□□ -0.8
CCSER1-207ENST00000508550 MYSM1Q5VVJ2 828 aa10.03□□□□□ -0.8
CCSER1-207ENST00000508550 TRIM46Q7Z4K8 759 aa10.03□□□□□ -0.8
CCSER1-207ENST00000508550 CHD1LQ86WJ1 897 aa10.03□□□□□ -0.8
CCSER1-207ENST00000508550 SIRT2Q8IXJ6 389 aa10.03□□□□□ -0.8
CCSER1-207ENST00000508550 PLBD2Q8NHP8 589 aa10.03□□□□□ -0.8
CCSER1-207ENST00000508550 PIGBQ92521 554 aa10.03□□□□□ -0.8
CCSER1-207ENST00000508550 SMARCC1Q92922 1105 aaPredicted RBP10.03□□□□□ -0.8
CCSER1-207ENST00000508550 PHAXQ9H814 394 aaKnown RBP10.03□□□□□ -0.8
CCSER1-207ENST00000508550 ADCY9O60503 1353 aa10.02□□□□□ -0.8
CCSER1-207ENST00000508550 LILRB3O75022 631 aa10.02□□□□□ -0.81
CCSER1-207ENST00000508550 CTHP32929 405 aa10.02□□□□□ -0.81
CCSER1-207ENST00000508550 SLC39A6Q13433 755 aa10.02□□□□□ -0.81
CCSER1-207ENST00000508550 SLC4A10Q6U841 1118 aa10.02□□□□□ -0.81
CCSER1-207ENST00000508550 SSH3Q8TE77 659 aa10.02□□□□□ -0.81
CCSER1-207ENST00000508550 NGLY1Q96IV0 654 aa10.02□□□□□ -0.81
CCSER1-207ENST00000508550 MEIS3Q99687 375 aa10.02□□□□□ -0.81
CCSER1-207ENST00000508550 METTL22Q9BUU2 404 aaPredicted RBP10.02□□□□□ -0.81
CCSER1-207ENST00000508550 LIMD1Q9UGP4 676 aa10.02□□□□□ -0.81
CCSER1-207ENST00000508550 RBM19Q9Y4C8 960 aaKnown RBP10.02□□□□□ -0.81
CCSER1-207ENST00000508550 USP16Q9Y5T5 823 aa10.02□□□□□ -0.81
CCSER1-207ENST00000508550 F6X3S4 739 aa10.01□□□□□ -0.81
CCSER1-207ENST00000508550 CDK15Q96Q40 435 aa10.01□□□□□ -0.81
CCSER1-207ENST00000508550 OSBPL3Q9H4L5 887 aa10.01□□□□□ -0.81
CCSER1-207ENST00000508550 ATG3Q9NT62 314 aa10.01□□□□□ -0.81
CCSER1-207ENST00000508550 TLL2Q9Y6L7 1015 aa10.01□□□□□ -0.81
CCSER1-207ENST00000508550 KCPQ6ZWJ8 1503 aa10.01□□□□□ -0.81
CCSER1-207ENST00000508550 NRAPQ86VF7 1730 aa10□□□□□ -0.81
CCSER1-207ENST00000508550 HSP90AB3PQ58FF7 597 aa10□□□□□ -0.81
CCSER1-207ENST00000508550 BMP2KLQ5H9B9 411 aa10□□□□□ -0.81
CCSER1-207ENST00000508550 LCE2CQ5TA81 110 aa10□□□□□ -0.81
CCSER1-207ENST00000508550 SLC24A3Q9HC58 644 aa10□□□□□ -0.81
CCSER1-207ENST00000508550 MAP10Q9P2G4 905 aa10□□□□□ -0.81
CCSER1-207ENST00000508550 MAP3K2Q9Y2U5 619 aa10□□□□□ -0.81
CCSER1-207ENST00000508550 NOP58Q9Y2X3 529 aaKnown RBP10□□□□□ -0.81
CCSER1-207ENST00000508550 ERVV-1B6SEH8 477 aa9.99□□□□□ -0.81
CCSER1-207ENST00000508550 GRM8O00222 908 aa9.99□□□□□ -0.81
CCSER1-207ENST00000508550 IL6STP40189 918 aaPredicted RBP9.99□□□□□ -0.81
CCSER1-207ENST00000508550 QPCTQ16769 361 aa9.99□□□□□ -0.81
CCSER1-207ENST00000508550 COPS6Q7L5N1 327 aa9.99□□□□□ -0.81
CCSER1-207ENST00000508550 CCDC191Q8NCU4 936 aa9.99□□□□□ -0.81
CCSER1-207ENST00000508550 IL27Q8NEV9 243 aa9.99□□□□□ -0.81
CCSER1-207ENST00000508550 FAM174AQ8TBP5 190 aa9.99□□□□□ -0.81
CCSER1-207ENST00000508550 KLF16Q9BXK1 252 aaPredicted RBP9.99□□□□□ -0.81
CCSER1-207ENST00000508550 USP35Q9P2H5 1018 aa9.99□□□□□ -0.81
CCSER1-207ENST00000508550 USP21Q9UK80 565 aa9.99□□□□□ -0.81
CCSER1-207ENST00000508550 TRPC5Q9UL62 973 aaPredicted RBP9.99□□□□□ -0.81
CCSER1-207ENST00000508550 PAPPAQ13219 1627 aa9.99□□□□□ -0.81
CCSER1-207ENST00000508550 NUTM2BA6NNL0 878 aaPredicted RBP9.98□□□□□ -0.81
CCSER1-207ENST00000508550 NEURL1BA8MQ27 555 aa9.98□□□□□ -0.81
CCSER1-207ENST00000508550 NUTM2EB1AL46 878 aaPredicted RBP9.98□□□□□ -0.81
CCSER1-207ENST00000508550 NNTQ13423 1086 aa9.98□□□□□ -0.81
CCSER1-207ENST00000508550 TICAM2Q86XR7 235 aa9.98□□□□□ -0.81
CCSER1-207ENST00000508550 ERC1Q8IUD2 1116 aa9.98□□□□□ -0.81
CCSER1-207ENST00000508550 NUTM2AQ8IVF1 878 aaPredicted RBP9.98□□□□□ -0.81
CCSER1-207ENST00000508550 MARCH10Q8NA82 808 aaPredicted RBP9.98□□□□□ -0.81
CCSER1-207ENST00000508550 XAGE3Q8WTP9 111 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms