RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 NRG1Q02297 640 aaPredicted RBP10.19□□□□□ -0.78
TOPBP1-206ENST00000508524 HHIPQ96QV1 700 aa10.19□□□□□ -0.78
TOPBP1-206ENST00000508524 MUC3BQ9H195 1237 aa10.19□□□□□ -0.78
TOPBP1-206ENST00000508524 SRA1Q9HD15 236 aaKnown RBP10.19□□□□□ -0.78
TOPBP1-206ENST00000508524 FURINP09958 794 aa10.18□□□□□ -0.78
TOPBP1-206ENST00000508524 CDC27P30260 824 aa10.18□□□□□ -0.78
TOPBP1-206ENST00000508524 DOC2BQ14184 412 aa10.18□□□□□ -0.78
TOPBP1-206ENST00000508524 IGF2-ASQ6U949 168 aa10.18□□□□□ -0.78
TOPBP1-206ENST00000508524 FAM129BQ96TA1 746 aa10.18□□□□□ -0.78
TOPBP1-206ENST00000508524 ADAM19Q9H013 955 aa10.18□□□□□ -0.78
TOPBP1-206ENST00000508524 IGHA2P01877 340 aa10.17□□□□□ -0.78
TOPBP1-206ENST00000508524 EPHA1P21709 976 aa10.17□□□□□ -0.78
TOPBP1-206ENST00000508524 TXNDC11Q6PKC3 985 aa10.17□□□□□ -0.78
TOPBP1-206ENST00000508524 TXNRD3Q86VQ6 643 aa10.17□□□□□ -0.78
TOPBP1-206ENST00000508524 MAP4K3Q8IVH8 894 aa10.17□□□□□ -0.78
TOPBP1-206ENST00000508524 ZFYVE28Q9HCC9 887 aa10.17□□□□□ -0.78
TOPBP1-206ENST00000508524 TPSG1Q9NRR2 321 aa10.17□□□□□ -0.78
TOPBP1-206ENST00000508524 USP21Q9UK80 565 aa10.17□□□□□ -0.78
TOPBP1-206ENST00000508524 AMOTL2Q9Y2J4 779 aa10.17□□□□□ -0.78
TOPBP1-206ENST00000508524 LINC01387J3KSC0 135 aa10.16□□□□□ -0.78
TOPBP1-206ENST00000508524 TM4SF5O14894 197 aa10.16□□□□□ -0.78
TOPBP1-206ENST00000508524 EDN3P14138 238 aa10.16□□□□□ -0.78
TOPBP1-206ENST00000508524 PTPRAP18433 802 aa10.16□□□□□ -0.78
TOPBP1-206ENST00000508524 SUZ12Q15022 739 aaKnown RBP10.16□□□□□ -0.78
TOPBP1-206ENST00000508524 PEAR1Q5VY43 1037 aaPredicted RBP10.16□□□□□ -0.78
TOPBP1-206ENST00000508524 ZKSCAN3Q9BRR0 538 aa10.16□□□□□ -0.78
TOPBP1-206ENST00000508524 SH2B1Q9NRF2 756 aaPredicted RBP10.16□□□□□ -0.78
TOPBP1-206ENST00000508524 LATS2Q9NRM7 1088 aa10.16□□□□□ -0.78
TOPBP1-206ENST00000508524 PDE2AO00408 941 aaPredicted RBP10.15□□□□□ -0.78
TOPBP1-206ENST00000508524 ADAM23O75077 832 aa10.15□□□□□ -0.78
TOPBP1-206ENST00000508524 TMEM102Q8N9M5 508 aaPredicted RBP10.15□□□□□ -0.78
TOPBP1-206ENST00000508524 GALNT11Q8NCW6 608 aa10.15□□□□□ -0.78
TOPBP1-206ENST00000508524 CITED4Q96RK1 184 aa10.15□□□□□ -0.78
TOPBP1-206ENST00000508524 OSMRQ99650 979 aa10.15□□□□□ -0.78
TOPBP1-206ENST00000508524 CDC25BP30305 580 aa10.14□□□□□ -0.79
TOPBP1-206ENST00000508524 K7ELQ4 463 aaPredicted RBP10.13□□□□□ -0.79
TOPBP1-206ENST00000508524 POLR3DP05423 398 aaPredicted RBP10.13□□□□□ -0.79
TOPBP1-206ENST00000508524 PDE3BQ13370 1112 aa10.13□□□□□ -0.79
TOPBP1-206ENST00000508524 NXPE3Q969Y0 559 aa10.13□□□□□ -0.79
TOPBP1-206ENST00000508524 SOX13Q9UN79 622 aa10.13□□□□□ -0.79
TOPBP1-206ENST00000508524 GPR182O15218 404 aa10.12□□□□□ -0.79
TOPBP1-206ENST00000508524 NOS3P29474 1203 aa10.12□□□□□ -0.79
TOPBP1-206ENST00000508524 RSPO4Q2I0M5 234 aaPredicted RBP10.12□□□□□ -0.79
TOPBP1-206ENST00000508524 WFDC12Q8WWY7 111 aa10.12□□□□□ -0.79
TOPBP1-206ENST00000508524 SSBP4Q9BWG4 385 aaPredicted RBP10.12□□□□□ -0.79
TOPBP1-206ENST00000508524 CARD10Q9BWT7 1032 aa10.12□□□□□ -0.79
TOPBP1-206ENST00000508524 H3BRJ5 948 aa10.11□□□□□ -0.79
TOPBP1-206ENST00000508524 FSCN2O14926 492 aa10.11□□□□□ -0.79
TOPBP1-206ENST00000508524 ORC1Q13415 861 aa10.11□□□□□ -0.79
TOPBP1-206ENST00000508524 FOXD4L6Q3SYB3 417 aaPredicted RBP10.11□□□□□ -0.79
TOPBP1-206ENST00000508524 NKAPLQ5M9Q1 402 aa10.11□□□□□ -0.79
TOPBP1-206ENST00000508524 USPL1Q5W0Q7 1092 aa10.11□□□□□ -0.79
TOPBP1-206ENST00000508524 FOXD4L3Q6VB84 417 aaPredicted RBP10.11□□□□□ -0.79
TOPBP1-206ENST00000508524 DCAF11Q8TEB1 546 aa10.11□□□□□ -0.79
TOPBP1-206ENST00000508524 TRAIPQ9BWF2 469 aa10.11□□□□□ -0.79
TOPBP1-206ENST00000508524 RBCK1Q9BYM8 510 aa10.11□□□□□ -0.79
TOPBP1-206ENST00000508524 BHLHE41Q9C0J9 482 aaPredicted RBP10.11□□□□□ -0.79
TOPBP1-206ENST00000508524 IREB2P48200 963 aaKnown RBP10.1□□□□□ -0.79
TOPBP1-206ENST00000508524 GALNT12Q8IXK2 581 aa10.1□□□□□ -0.79
TOPBP1-206ENST00000508524 MRPL18Q9H0U6 180 aaKnown RBP10.1□□□□□ -0.79
TOPBP1-206ENST00000508524 KCNK4Q9NYG8 393 aa10.1□□□□□ -0.79
TOPBP1-206ENST00000508524 FAM177BA6PVY3 158 aa10.09□□□□□ -0.79
TOPBP1-206ENST00000508524 CD68P34810 354 aaPredicted RBP10.09□□□□□ -0.79
TOPBP1-206ENST00000508524 FAM117BQ6P1L5 589 aa10.09□□□□□ -0.79
TOPBP1-206ENST00000508524 TMEM130Q8N3G9 435 aa10.09□□□□□ -0.79
TOPBP1-206ENST00000508524 BIN2Q9UBW5 565 aaPredicted RBP10.09□□□□□ -0.79
TOPBP1-206ENST00000508524 IVNS1ABPQ9Y6Y0 642 aa10.09□□□□□ -0.79
TOPBP1-206ENST00000508524 F8W735 103 aaPredicted RBP10.08□□□□□ -0.8
TOPBP1-206ENST00000508524 WISP1O95388 367 aa10.08□□□□□ -0.8
TOPBP1-206ENST00000508524 ITGB7P26010 798 aa10.08□□□□□ -0.8
TOPBP1-206ENST00000508524 KCNA1Q09470 495 aa10.08□□□□□ -0.8
TOPBP1-206ENST00000508524 VN1R5Q7Z5H4 357 aa10.08□□□□□ -0.8
TOPBP1-206ENST00000508524 KLHL23Q8NBE8 558 aa10.08□□□□□ -0.8
TOPBP1-206ENST00000508524 BSNDQ8WZ55 320 aa10.08□□□□□ -0.8
TOPBP1-206ENST00000508524 MEGF10Q96KG7 1140 aa10.08□□□□□ -0.8
TOPBP1-206ENST00000508524 AKTIPQ9H8T0 292 aa10.08□□□□□ -0.8
TOPBP1-206ENST00000508524 SEC31BQ9NQW1 1179 aa10.08□□□□□ -0.8
TOPBP1-206ENST00000508524 A0A1W2PP55 124 aa10.07□□□□□ -0.8
TOPBP1-206ENST00000508524 ADAM11O75078 769 aa10.07□□□□□ -0.8
TOPBP1-206ENST00000508524 ALX3O95076 343 aa10.07□□□□□ -0.8
TOPBP1-206ENST00000508524 NEFLP07196 543 aa10.07□□□□□ -0.8
TOPBP1-206ENST00000508524 CABP4P57796 275 aa10.07□□□□□ -0.8
TOPBP1-206ENST00000508524 PIP4K2BP78356 416 aa10.07□□□□□ -0.8
TOPBP1-206ENST00000508524 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.07□□□□□ -0.8
TOPBP1-206ENST00000508524 TMC1Q8TDI8 760 aa10.07□□□□□ -0.8
TOPBP1-206ENST00000508524 WNT8BQ93098 351 aa10.07□□□□□ -0.8
TOPBP1-206ENST00000508524 ALKBH8Q96BT7 664 aaKnown RBP10.07□□□□□ -0.8
TOPBP1-206ENST00000508524 KLHDC7BQ96G42 594 aa10.07□□□□□ -0.8
TOPBP1-206ENST00000508524 DMRTB1Q96MA1 342 aa10.07□□□□□ -0.8
TOPBP1-206ENST00000508524 NIF3L1Q9GZT8 377 aa10.07□□□□□ -0.8
TOPBP1-206ENST00000508524 DCTN4Q9UJW0 460 aa10.07□□□□□ -0.8
TOPBP1-206ENST00000508524 METTL12A8MUP2 240 aa10.06□□□□□ -0.8
TOPBP1-206ENST00000508524 DDX3YO15523 660 aaKnown RBP10.06□□□□□ -0.8
TOPBP1-206ENST00000508524 CPNE3O75131 537 aaKnown RBP10.06□□□□□ -0.8
TOPBP1-206ENST00000508524 Q6ZS46 218 aa10.06□□□□□ -0.8
TOPBP1-206ENST00000508524 TMC7Q7Z402 723 aa10.06□□□□□ -0.8
TOPBP1-206ENST00000508524 FOXD4L4Q8WXT5 416 aaPredicted RBP10.06□□□□□ -0.8
TOPBP1-206ENST00000508524 EIF1AYO14602 144 aaKnown RBP10.05□□□□□ -0.8
TOPBP1-206ENST00000508524 DYRK3O43781 588 aa10.05□□□□□ -0.8
TOPBP1-206ENST00000508524 HGSNATQ68CP4 663 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms