RNA–Protein interactions for RNA: ENST00000508308.1

HMGN1P16-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 16, humanhuman

BASIC

Gene HMGN1P16, Length 283 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P16-201ENST00000508308 DPF2Q92785 391 aa8.32□□□□□ -1.08
HMGN1P16-201ENST00000508308 BCL2L13Q9BXK5 485 aa8.32□□□□□ -1.08
HMGN1P16-201ENST00000508308 CWC25Q9NXE8 425 aaPredicted RBP8.32□□□□□ -1.08
HMGN1P16-201ENST00000508308 MAP3K2Q9Y2U5 619 aa8.32□□□□□ -1.08
HMGN1P16-201ENST00000508308 ASTN2O75129 1339 aaPredicted RBP8.31□□□□□ -1.08
HMGN1P16-201ENST00000508308 ZNF646O15015 1829 aaPredicted RBP8.31□□□□□ -1.08
HMGN1P16-201ENST00000508308 PSME4Q14997 1843 aa8.31□□□□□ -1.08
HMGN1P16-201ENST00000508308 PI4KAP2A4QPH2 592 aa8.31□□□□□ -1.08
HMGN1P16-201ENST00000508308 PDE8AO60658 829 aa8.31□□□□□ -1.08
HMGN1P16-201ENST00000508308 VIL1P09327 827 aaKnown RBP8.31□□□□□ -1.08
HMGN1P16-201ENST00000508308 MAP2K1Q02750 393 aaPredicted RBP8.31□□□□□ -1.08
HMGN1P16-201ENST00000508308 CALD1Q05682 793 aaKnown RBP8.31□□□□□ -1.08
HMGN1P16-201ENST00000508308 CCDC27Q2M243 656 aa8.31□□□□□ -1.08
HMGN1P16-201ENST00000508308 TBC1D10BQ4KMP7 808 aaPredicted RBP8.31□□□□□ -1.08
HMGN1P16-201ENST00000508308 CCDC30Q5VVM6 783 aa8.31□□□□□ -1.08
HMGN1P16-201ENST00000508308 KSR2Q6VAB6 950 aa8.31□□□□□ -1.08
HMGN1P16-201ENST00000508308 USP48Q86UV5 1035 aa8.31□□□□□ -1.08
HMGN1P16-201ENST00000508308 PI4KAP1Q8N8J0 262 aa8.31□□□□□ -1.08
HMGN1P16-201ENST00000508308 CCDC85AQ96PX6 553 aaPredicted RBP8.31□□□□□ -1.08
HMGN1P16-201ENST00000508308 ZIC5Q96T25 663 aa8.31□□□□□ -1.08
HMGN1P16-201ENST00000508308 H7C1D1 291 aa8.3□□□□□ -1.08
HMGN1P16-201ENST00000508308 GRM1Q13255 1194 aa8.3□□□□□ -1.08
HMGN1P16-201ENST00000508308 CWF19L2Q2TBE0 894 aaKnown RBP8.3□□□□□ -1.08
HMGN1P16-201ENST00000508308 CDC37L1Q7L3B6 337 aa8.3□□□□□ -1.08
HMGN1P16-201ENST00000508308 TTLL11Q8NHH1 800 aa8.3□□□□□ -1.08
HMGN1P16-201ENST00000508308 AIDAQ96BJ3 306 aa8.3□□□□□ -1.08
HMGN1P16-201ENST00000508308 GMLQ99445 158 aa8.3□□□□□ -1.08
HMGN1P16-201ENST00000508308 MYH3P11055 1940 aa8.3□□□□□ -1.08
HMGN1P16-201ENST00000508308 ZNF609O15014 1411 aa8.29□□□□□ -1.08
HMGN1P16-201ENST00000508308 SPEF2Q9C093 1822 aa8.29□□□□□ -1.08
HMGN1P16-201ENST00000508308 NEURL1BA8MQ27 555 aa8.29□□□□□ -1.08
HMGN1P16-201ENST00000508308 ADM5C9JUS6 153 aa8.29□□□□□ -1.08
HMGN1P16-201ENST00000508308 H7C1W4 665 aa8.29□□□□□ -1.08
HMGN1P16-201ENST00000508308 UFL1O94874 794 aa8.29□□□□□ -1.08
HMGN1P16-201ENST00000508308 RPS12P25398 132 aaKnown RBP8.29□□□□□ -1.08
HMGN1P16-201ENST00000508308 MAP2K2P36507 400 aa8.29□□□□□ -1.08
HMGN1P16-201ENST00000508308 ECE1P42892 770 aa8.29□□□□□ -1.08
HMGN1P16-201ENST00000508308 CASP7P55210 303 aa8.29□□□□□ -1.08
HMGN1P16-201ENST00000508308 CTSWP56202 376 aa8.29□□□□□ -1.08
HMGN1P16-201ENST00000508308 CCDC152Q4G0S7 254 aa8.29□□□□□ -1.08
HMGN1P16-201ENST00000508308 RBM26Q5T8P6 1007 aaKnown RBP8.29□□□□□ -1.08
HMGN1P16-201ENST00000508308 PAXIP1Q6ZW49 1069 aaPredicted RBP8.29□□□□□ -1.08
HMGN1P16-201ENST00000508308 HHIPL1Q96JK4 782 aa8.29□□□□□ -1.08
HMGN1P16-201ENST00000508308 EYA3Q99504 573 aa8.29□□□□□ -1.08
HMGN1P16-201ENST00000508308 ZC3H12CQ9C0D7 883 aaKnown RBP8.29□□□□□ -1.08
HMGN1P16-201ENST00000508308 GREM2Q9H772 168 aa8.29□□□□□ -1.08
HMGN1P16-201ENST00000508308 ANKIB1Q9P2G1 1089 aa8.29□□□□□ -1.08
HMGN1P16-201ENST00000508308 TSKSQ9UJT2 592 aa8.29□□□□□ -1.08
HMGN1P16-201ENST00000508308 CASP8AP2Q9UKL3 1982 aa8.28□□□□□ -1.08
HMGN1P16-201ENST00000508308 FAM155AB1AL88 458 aaPredicted RBP8.28□□□□□ -1.08
HMGN1P16-201ENST00000508308 DDX58O95786 925 aaKnown RBP8.28□□□□□ -1.08
HMGN1P16-201ENST00000508308 ZNF280AP59817 542 aaPredicted RBP8.28□□□□□ -1.08
HMGN1P16-201ENST00000508308 TWISTNBQ3B726 338 aaPredicted RBP8.28□□□□□ -1.08
HMGN1P16-201ENST00000508308 KRT26Q7Z3Y9 468 aa8.28□□□□□ -1.08
HMGN1P16-201ENST00000508308 TXNRD3Q86VQ6 643 aa8.28□□□□□ -1.08
HMGN1P16-201ENST00000508308 ZNF408Q9H9D4 720 aa8.28□□□□□ -1.08
HMGN1P16-201ENST00000508308 GGA1Q9UJY5 639 aa8.28□□□□□ -1.08
HMGN1P16-201ENST00000508308 MINPP1Q9UNW1 487 aa8.28□□□□□ -1.08
HMGN1P16-201ENST00000508308 XDHP47989 1333 aa8.28□□□□□ -1.08
HMGN1P16-201ENST00000508308 IL16Q14005 1332 aa8.28□□□□□ -1.08
HMGN1P16-201ENST00000508308 FANCIQ9NVI1 1328 aa8.28□□□□□ -1.08
HMGN1P16-201ENST00000508308 TNRC18O15417 2968 aaPredicted RBP8.27□□□□□ -1.09
HMGN1P16-201ENST00000508308 VAMP4O75379 141 aa8.27□□□□□ -1.09
HMGN1P16-201ENST00000508308 HSP90B1P14625 803 aaKnown RBP8.27□□□□□ -1.09
HMGN1P16-201ENST00000508308 HUNKP57058 714 aa8.27□□□□□ -1.09
HMGN1P16-201ENST00000508308 FLIIQ13045 1269 aa8.27□□□□□ -1.09
HMGN1P16-201ENST00000508308 GCKRQ14397 625 aa8.27□□□□□ -1.09
HMGN1P16-201ENST00000508308 KIF4BQ2VIQ3 1234 aa8.27□□□□□ -1.09
HMGN1P16-201ENST00000508308 RSBN1LQ6PCB5 846 aaPredicted RBP8.27□□□□□ -1.09
HMGN1P16-201ENST00000508308 UBE3BQ7Z3V4 1068 aa8.27□□□□□ -1.09
HMGN1P16-201ENST00000508308 ANKRD18AQ8IVF6 992 aa8.27□□□□□ -1.09
HMGN1P16-201ENST00000508308 AGBL3Q8NEM8 1001 aa8.27□□□□□ -1.09
HMGN1P16-201ENST00000508308 MXD3Q9BW11 206 aa8.27□□□□□ -1.09
HMGN1P16-201ENST00000508308 OCEL1Q9H607 264 aa8.27□□□□□ -1.09
HMGN1P16-201ENST00000508308 BSDC1Q9NW68 430 aaPredicted RBP8.27□□□□□ -1.09
HMGN1P16-201ENST00000508308 CACNA1FO60840 1977 aa8.27□□□□□ -1.09
HMGN1P16-201ENST00000508308 CSF1RP07333 972 aa8.26□□□□□ -1.09
HMGN1P16-201ENST00000508308 ATP2B4P23634 1241 aa8.26□□□□□ -1.09
HMGN1P16-201ENST00000508308 KLRK1P26718 216 aa8.26□□□□□ -1.09
HMGN1P16-201ENST00000508308 BRPF1P55201 1214 aaPredicted RBP8.26□□□□□ -1.09
HMGN1P16-201ENST00000508308 SCARF1Q14162 830 aa8.26□□□□□ -1.09
HMGN1P16-201ENST00000508308 DACT2Q5SW24 774 aa8.26□□□□□ -1.09
HMGN1P16-201ENST00000508308 ABHD8Q96I13 439 aa8.26□□□□□ -1.09
HMGN1P16-201ENST00000508308 PLA2G12BQ9BX93 195 aa8.26□□□□□ -1.09
HMGN1P16-201ENST00000508308 STK31Q9BXU1 1019 aa8.26□□□□□ -1.09
HMGN1P16-201ENST00000508308 CHMP4AQ9BY43 222 aa8.26□□□□□ -1.09
HMGN1P16-201ENST00000508308 GBA2Q9HCG7 927 aaPredicted RBP8.26□□□□□ -1.09
HMGN1P16-201ENST00000508308 GGA3Q9NZ52 723 aa8.26□□□□□ -1.09
HMGN1P16-201ENST00000508308 SCAF8Q9UPN6 1271 aaKnown RBP8.26□□□□□ -1.09
HMGN1P16-201ENST00000508308 IRS2Q9Y4H2 1338 aa8.26□□□□□ -1.09
HMGN1P16-201ENST00000508308 MED23Q9ULK4 1368 aa8.25□□□□□ -1.09
HMGN1P16-201ENST00000508308 USP17L3A6NCW0 530 aa8.25□□□□□ -1.09
HMGN1P16-201ENST00000508308 USP17L4A6NCW7 530 aa8.25□□□□□ -1.09
HMGN1P16-201ENST00000508308 USP17L8P0C7I0 530 aa8.25□□□□□ -1.09
HMGN1P16-201ENST00000508308 CCT4P50991 539 aaKnown RBP8.25□□□□□ -1.09
HMGN1P16-201ENST00000508308 FOXO4P98177 505 aa8.25□□□□□ -1.09
HMGN1P16-201ENST00000508308 EXOSC9Q06265 439 aaKnown RBP8.25□□□□□ -1.09
HMGN1P16-201ENST00000508308 NEXNQ0ZGT2 675 aa8.25□□□□□ -1.09
HMGN1P16-201ENST00000508308 FAM161AQ3B820 660 aa8.25□□□□□ -1.09
HMGN1P16-201ENST00000508308 NBPF9Q3BBW0 867 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms