RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 TRIM27P14373 513 aa24.88■■□□□ 1.57
SFXN1-209ENST00000508290 UBE4AQ14139 1066 aa24.88■■□□□ 1.57
SFXN1-209ENST00000508290 ZKSCAN2Q63HK3 967 aa24.88■■□□□ 1.57
SFXN1-209ENST00000508290 MAP1SQ66K74 1059 aaPredicted RBP24.88■■□□□ 1.57
SFXN1-209ENST00000508290 FRAT1Q92837 279 aaPredicted RBP24.88■■□□□ 1.57
SFXN1-209ENST00000508290 KCNQ5Q9NR82 932 aa24.88■■□□□ 1.57
SFXN1-209ENST00000508290 FBXO3Q9UK99 471 aa24.88■■□□□ 1.57
SFXN1-209ENST00000508290 CEP350Q5VT06 3117 aa24.87■■□□□ 1.57
SFXN1-209ENST00000508290 TAF5LO75529 589 aa24.87■■□□□ 1.57
SFXN1-209ENST00000508290 DNAJC5GQ8N7S2 189 aa24.87■■□□□ 1.57
SFXN1-209ENST00000508290 RIPOR2Q9Y4F9 1068 aa24.87■■□□□ 1.57
SFXN1-209ENST00000508290 WTIPA6NIX2 430 aaPredicted RBP24.86■■□□□ 1.57
SFXN1-209ENST00000508290 IRS2Q9Y4H2 1338 aa24.86■■□□□ 1.57
SFXN1-209ENST00000508290 PSME4Q14997 1843 aa24.85■■□□□ 1.57
SFXN1-209ENST00000508290 TMEM88BA6NKF7 163 aa24.85■■□□□ 1.57
SFXN1-209ENST00000508290 USP17L8P0C7I0 530 aa24.85■■□□□ 1.57
SFXN1-209ENST00000508290 ZNF280AP59817 542 aaPredicted RBP24.85■■□□□ 1.57
SFXN1-209ENST00000508290 DACT2Q5SW24 774 aa24.85■■□□□ 1.57
SFXN1-209ENST00000508290 TXNRD3Q86VQ6 643 aa24.85■■□□□ 1.57
SFXN1-209ENST00000508290 HELBQ8NG08 1087 aaPredicted RBP24.85■■□□□ 1.57
SFXN1-209ENST00000508290 KLRG1Q96E93 195 aa24.85■■□□□ 1.57
SFXN1-209ENST00000508290 GMLQ99445 158 aa24.85■■□□□ 1.57
SFXN1-209ENST00000508290 CD209Q9NNX6 404 aa24.85■■□□□ 1.57
SFXN1-209ENST00000508290 OGFOD1Q8N543 542 aa24.84■■□□□ 1.57
SFXN1-209ENST00000508290 TRPM4Q8TD43 1214 aa24.84■■□□□ 1.57
SFXN1-209ENST00000508290 SCN9AQ15858 1988 aa24.84■■□□□ 1.57
SFXN1-209ENST00000508290 PLIN1O60240 522 aa24.83■■□□□ 1.57
SFXN1-209ENST00000508290 IL1R1P14778 569 aa24.83■■□□□ 1.57
SFXN1-209ENST00000508290 METTL24Q5JXM2 366 aa24.83■■□□□ 1.57
SFXN1-209ENST00000508290 TTLL5Q6EMB2 1281 aa24.83■■□□□ 1.57
SFXN1-209ENST00000508290 CDC37L1Q7L3B6 337 aa24.83■■□□□ 1.57
SFXN1-209ENST00000508290 A0A1B0GUL6 1792 aa24.82■■□□□ 1.56
SFXN1-209ENST00000508290 KLRK1P26718 216 aa24.82■■□□□ 1.56
SFXN1-209ENST00000508290 HIRAP54198 1017 aaPredicted RBP24.82■■□□□ 1.56
SFXN1-209ENST00000508290 KIF4BQ2VIQ3 1234 aa24.82■■□□□ 1.56
SFXN1-209ENST00000508290 MEIS3Q99687 375 aa24.82■■□□□ 1.56
SFXN1-209ENST00000508290 PUS3Q9BZE2 481 aaKnown RBP24.82■■□□□ 1.56
SFXN1-209ENST00000508290 LRRFIP2Q9Y608 721 aaKnown RBP24.82■■□□□ 1.56
SFXN1-209ENST00000508290 EYA2O00167 538 aa24.81■■□□□ 1.56
SFXN1-209ENST00000508290 PDE8BO95263 885 aa24.81■■□□□ 1.56
SFXN1-209ENST00000508290 RFX5P48382 616 aaPredicted RBP24.81■■□□□ 1.56
SFXN1-209ENST00000508290 FKBP1AP62942 108 aaKnown RBP24.81■■□□□ 1.56
SFXN1-209ENST00000508290 TBC1D10BQ4KMP7 808 aaPredicted RBP24.81■■□□□ 1.56
SFXN1-209ENST00000508290 SAMD7Q7Z3H4 446 aa24.81■■□□□ 1.56
SFXN1-209ENST00000508290 CIAO1O76071 339 aa24.8■■□□□ 1.56
SFXN1-209ENST00000508290 FTSJ3Q8IY81 847 aaKnown RBP24.8■■□□□ 1.56
SFXN1-209ENST00000508290 MS4A1P11836 297 aa24.79■■□□□ 1.56
SFXN1-209ENST00000508290 HTRA3P83110 453 aa24.79■■□□□ 1.56
SFXN1-209ENST00000508290 PTPN12Q05209 780 aaKnown RBP24.79■■□□□ 1.56
SFXN1-209ENST00000508290 MTX1Q13505 466 aa24.79■■□□□ 1.56
SFXN1-209ENST00000508290 LRRC24Q50LG9 513 aa24.79■■□□□ 1.56
SFXN1-209ENST00000508290 VGLL2Q8N8G2 317 aa24.79■■□□□ 1.56
SFXN1-209ENST00000508290 FBXW7Q969H0 707 aa24.79■■□□□ 1.56
SFXN1-209ENST00000508290 DCPSQ96C86 337 aaKnown RBP24.79■■□□□ 1.56
SFXN1-209ENST00000508290 MYOZ2Q9NPC6 264 aa24.79■■□□□ 1.56
SFXN1-209ENST00000508290 HDAC9Q9UKV0 1011 aa24.79■■□□□ 1.56
SFXN1-209ENST00000508290 SHTN1A0MZ66 631 aa24.78■■□□□ 1.56
SFXN1-209ENST00000508290 SNAP23O00161 211 aa24.78■■□□□ 1.56
SFXN1-209ENST00000508290 SASH1O94885 1247 aa24.78■■□□□ 1.56
SFXN1-209ENST00000508290 GNAI2P04899 355 aa24.78■■□□□ 1.56
SFXN1-209ENST00000508290 HIBADHP31937 336 aaKnown RBP24.78■■□□□ 1.56
SFXN1-209ENST00000508290 GTF2IP78347 998 aa24.78■■□□□ 1.56
SFXN1-209ENST00000508290 PUM3Q15397 648 aaKnown RBP24.78■■□□□ 1.56
SFXN1-209ENST00000508290 CAVIN4Q5BKX8 364 aa24.78■■□□□ 1.56
SFXN1-209ENST00000508290 JMYQ8N9B5 988 aa24.78■■□□□ 1.56
SFXN1-209ENST00000508290 DZIP1LQ8IYY4 767 aaKnown RBP24.77■■□□□ 1.56
SFXN1-209ENST00000508290 CLUAP1Q96AJ1 413 aa24.77■■□□□ 1.56
SFXN1-209ENST00000508290 COPRSQ9NQ92 184 aa24.77■■□□□ 1.56
SFXN1-209ENST00000508290 IFIT1P09914 478 aaKnown RBP24.76■■□□□ 1.55
SFXN1-209ENST00000508290 IL15P40933 162 aaPredicted RBP24.76■■□□□ 1.55
SFXN1-209ENST00000508290 RBM26Q5T8P6 1007 aaKnown RBP24.76■■□□□ 1.55
SFXN1-209ENST00000508290 VPS37DQ86XT2 251 aa24.76■■□□□ 1.55
SFXN1-209ENST00000508290 KLHDC4Q8TBB5 520 aa24.76■■□□□ 1.55
SFXN1-209ENST00000508290 PITPNM2Q9BZ72 1349 aa24.76■■□□□ 1.55
SFXN1-209ENST00000508290 SULF1Q8IWU6 871 aa24.75■■□□□ 1.55
SFXN1-209ENST00000508290 TMEM57Q8N5G2 664 aa24.75■■□□□ 1.55
SFXN1-209ENST00000508290 TDRD7Q8NHU6 1098 aaKnown RBP24.75■■□□□ 1.55
SFXN1-209ENST00000508290 FAM84BQ96KN1 310 aaPredicted RBP24.75■■□□□ 1.55
SFXN1-209ENST00000508290 FAM205AQ6ZU69 1335 aa24.75■■□□□ 1.55
SFXN1-209ENST00000508290 CNTNAP1P78357 1384 aa24.75■■□□□ 1.55
SFXN1-209ENST00000508290 EGFRP00533 1210 aa24.74■■□□□ 1.55
SFXN1-209ENST00000508290 KRT26Q7Z3Y9 468 aa24.74■■□□□ 1.55
SFXN1-209ENST00000508290 LPIN2Q92539 896 aa24.74■■□□□ 1.55
SFXN1-209ENST00000508290 GLIS2Q9BZE0 524 aaPredicted RBP24.74■■□□□ 1.55
SFXN1-209ENST00000508290 RASSF10A6NK89 507 aa24.73■■□□□ 1.55
SFXN1-209ENST00000508290 SRGAP3O43295 1099 aa24.73■■□□□ 1.55
SFXN1-209ENST00000508290 GGA3Q9NZ52 723 aa24.73■■□□□ 1.55
SFXN1-209ENST00000508290 CEP126Q9P2H0 1117 aa24.73■■□□□ 1.55
SFXN1-209ENST00000508290 TRAF5O00463 557 aa24.72■■□□□ 1.55
SFXN1-209ENST00000508290 SLC5A1P13866 664 aa24.72■■□□□ 1.55
SFXN1-209ENST00000508290 FGFR2P21802 821 aa24.72■■□□□ 1.55
SFXN1-209ENST00000508290 GYG1P46976 350 aa24.72■■□□□ 1.55
SFXN1-209ENST00000508290 SCARF1Q14162 830 aa24.72■■□□□ 1.55
SFXN1-209ENST00000508290 ATG9AQ7Z3C6 839 aa24.72■■□□□ 1.55
SFXN1-209ENST00000508290 FBXO33Q7Z6M2 555 aa24.72■■□□□ 1.55
SFXN1-209ENST00000508290 ABT1Q9ULW3 272 aaKnown RBP24.72■■□□□ 1.55
SFXN1-209ENST00000508290 ZNF646O15015 1829 aaPredicted RBP24.72■■□□□ 1.55
SFXN1-209ENST00000508290 KIAA0825Q8IV33 1275 aa24.71■■□□□ 1.55
SFXN1-209ENST00000508290 TBC1D22AQ8WUA7 517 aa24.71■■□□□ 1.55
SFXN1-209ENST00000508290 USP48Q86UV5 1035 aa24.7■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms