RNA–Protein interactions for RNA: ENST00000508169.1

COL6A4P1-204, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 3

Gene COL6A4P1, Length 527 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-204ENST00000508169 HHIPQ96QV1 700 aa10.63□□□□□ -0.71
COL6A4P1-204ENST00000508169 PBX4Q9BYU1 374 aa10.63□□□□□ -0.71
COL6A4P1-204ENST00000508169 BHLHE41Q9C0J9 482 aaPredicted RBP10.63□□□□□ -0.71
COL6A4P1-204ENST00000508169 RASSF4Q9H2L5 321 aa10.63□□□□□ -0.71
COL6A4P1-204ENST00000508169 PDE2AO00408 941 aaPredicted RBP10.62□□□□□ -0.71
COL6A4P1-204ENST00000508169 PPM1HQ9ULR3 514 aa10.62□□□□□ -0.71
COL6A4P1-204ENST00000508169 SLC6A14Q9UN76 642 aa10.62□□□□□ -0.71
COL6A4P1-204ENST00000508169 AKAP2Q9Y2D5 859 aa10.62□□□□□ -0.71
COL6A4P1-204ENST00000508169 ADH7P40394 386 aa10.61□□□□□ -0.71
COL6A4P1-204ENST00000508169 GRIA4P48058 902 aa10.61□□□□□ -0.71
COL6A4P1-204ENST00000508169 PTPN12Q05209 780 aaKnown RBP10.61□□□□□ -0.71
COL6A4P1-204ENST00000508169 FAM35AQ86V20 835 aa10.61□□□□□ -0.71
COL6A4P1-204ENST00000508169 NXPE3Q969Y0 559 aa10.61□□□□□ -0.71
COL6A4P1-204ENST00000508169 TGIF2Q9GZN2 237 aa10.61□□□□□ -0.71
COL6A4P1-204ENST00000508169 KLF15Q9UIH9 416 aa10.61□□□□□ -0.71
COL6A4P1-204ENST00000508169 METTL12A8MUP2 240 aa10.6□□□□□ -0.71
COL6A4P1-204ENST00000508169 VSIG8P0DPA2 414 aa10.6□□□□□ -0.71
COL6A4P1-204ENST00000508169 CPB1P15086 417 aa10.6□□□□□ -0.71
COL6A4P1-204ENST00000508169 ASAP3Q8TDY4 903 aa10.6□□□□□ -0.71
COL6A4P1-204ENST00000508169 CCSER2Q9H7U1 834 aa10.6□□□□□ -0.71
COL6A4P1-204ENST00000508169 ZFYVE1Q9HBF4 777 aa10.6□□□□□ -0.71
COL6A4P1-204ENST00000508169 GGT7Q9UJ14 662 aa10.6□□□□□ -0.71
COL6A4P1-204ENST00000508169 NEURL1BA8MQ27 555 aa10.59□□□□□ -0.71
COL6A4P1-204ENST00000508169 ADARB2-AS1A8MUL3 147 aa10.59□□□□□ -0.71
COL6A4P1-204ENST00000508169 SMNDC1O75940 238 aaKnown RBP eCLIP10.59□□□□□ -0.71
COL6A4P1-204ENST00000508169 ITPKAP23677 461 aa10.59□□□□□ -0.71
COL6A4P1-204ENST00000508169 MICALL1Q8N3F8 863 aa10.59□□□□□ -0.71
COL6A4P1-204ENST00000508169 ANKRD24Q8TF21 1146 aa10.59□□□□□ -0.71
COL6A4P1-204ENST00000508169 IGF1RP08069 1367 aa10.58□□□□□ -0.72
COL6A4P1-204ENST00000508169 A0A096LPE4 126 aa10.58□□□□□ -0.72
COL6A4P1-204ENST00000508169 A0A1W2PPZ6 126 aa10.58□□□□□ -0.72
COL6A4P1-204ENST00000508169 SPRED3Q2MJR0 410 aa10.58□□□□□ -0.72
COL6A4P1-204ENST00000508169 NAALADL2Q58DX5 795 aa10.58□□□□□ -0.72
COL6A4P1-204ENST00000508169 PERM1Q5SV97 790 aa10.58□□□□□ -0.72
COL6A4P1-204ENST00000508169 CEP135Q66GS9 1140 aa10.58□□□□□ -0.72
COL6A4P1-204ENST00000508169 FCHSD1Q86WN1 690 aa10.58□□□□□ -0.72
COL6A4P1-204ENST00000508169 PLD4Q96BZ4 506 aa10.58□□□□□ -0.72
COL6A4P1-204ENST00000508169 NOC4LQ9BVI4 516 aaKnown RBP10.58□□□□□ -0.72
COL6A4P1-204ENST00000508169 COL25A1Q9BXS0 654 aaPredicted RBP10.58□□□□□ -0.72
COL6A4P1-204ENST00000508169 NAGPAQ9UK23 515 aa10.58□□□□□ -0.72
COL6A4P1-204ENST00000508169 CCDC85BQ15834 202 aaPredicted RBP10.57□□□□□ -0.72
COL6A4P1-204ENST00000508169 ZNF394Q53GI3 561 aa10.57□□□□□ -0.72
COL6A4P1-204ENST00000508169 ELMSAN1Q6PJG2 1045 aa10.57□□□□□ -0.72
COL6A4P1-204ENST00000508169 USP48Q86UV5 1035 aa10.57□□□□□ -0.72
COL6A4P1-204ENST00000508169 POP1Q99575 1024 aaKnown RBP10.57□□□□□ -0.72
COL6A4P1-204ENST00000508169 MDFIQ99750 246 aa10.57□□□□□ -0.72
COL6A4P1-204ENST00000508169 GGA1Q9UJY5 639 aa10.57□□□□□ -0.72
COL6A4P1-204ENST00000508169 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.57□□□□□ -0.72
COL6A4P1-204ENST00000508169 ELOA3CA0A087WX78 387 aaPredicted RBP10.56□□□□□ -0.72
COL6A4P1-204ENST00000508169 ELOA3DA6NLF2 546 aaPredicted RBP10.56□□□□□ -0.72
COL6A4P1-204ENST00000508169 FBXO24O75426 580 aa10.56□□□□□ -0.72
COL6A4P1-204ENST00000508169 ELOA3BQ3SY89 546 aa10.56□□□□□ -0.72
COL6A4P1-204ENST00000508169 RNFT1Q5M7Z0 435 aa10.56□□□□□ -0.72
COL6A4P1-204ENST00000508169 ZNF787Q6DD87 383 aa10.56□□□□□ -0.72
COL6A4P1-204ENST00000508169 TPTE2Q6XPS3 522 aa10.56□□□□□ -0.72
COL6A4P1-204ENST00000508169 ERMP1Q7Z2K6 904 aa10.56□□□□□ -0.72
COL6A4P1-204ENST00000508169 ELOA3Q8NG57 546 aa10.56□□□□□ -0.72
COL6A4P1-204ENST00000508169 SMG9Q9H0W8 520 aaKnown RBP10.56□□□□□ -0.72
COL6A4P1-204ENST00000508169 PCDHGB7Q9Y5F8 929 aa10.56□□□□□ -0.72
COL6A4P1-204ENST00000508169 TERTO14746 1132 aaKnown RBP10.55□□□□□ -0.72
COL6A4P1-204ENST00000508169 ZNF654Q8IZM8 581 aa10.55□□□□□ -0.72
COL6A4P1-204ENST00000508169 GOLGA6L1Q8N7Z2 621 aa10.55□□□□□ -0.72
COL6A4P1-204ENST00000508169 SLC16A10Q8TF71 515 aa10.55□□□□□ -0.72
COL6A4P1-204ENST00000508169 LPIN3Q9BQK8 851 aa10.55□□□□□ -0.72
COL6A4P1-204ENST00000508169 ACBD3Q9H3P7 528 aa10.55□□□□□ -0.72
COL6A4P1-204ENST00000508169 ZNF576Q9H609 170 aa10.55□□□□□ -0.72
COL6A4P1-204ENST00000508169 FRRS1LQ9P0K9 344 aa10.55□□□□□ -0.72
COL6A4P1-204ENST00000508169 DDX41Q9UJV9 622 aaKnown RBP10.55□□□□□ -0.72
COL6A4P1-204ENST00000508169 GDF2Q9UK05 429 aaPredicted RBP10.55□□□□□ -0.72
COL6A4P1-204ENST00000508169 IGSF3O75054 1194 aa10.54□□□□□ -0.72
COL6A4P1-204ENST00000508169 ALAS2P22557 587 aa10.54□□□□□ -0.72
COL6A4P1-204ENST00000508169 SLCO4C1Q6ZQN7 724 aa10.54□□□□□ -0.72
COL6A4P1-204ENST00000508169 SV2BQ7L1I2 683 aa10.54□□□□□ -0.72
COL6A4P1-204ENST00000508169 BSNDQ8WZ55 320 aa10.54□□□□□ -0.72
COL6A4P1-204ENST00000508169 CEP44Q9C0F1 390 aa10.54□□□□□ -0.72
COL6A4P1-204ENST00000508169 MUC3BQ9H195 1237 aa10.54□□□□□ -0.72
COL6A4P1-204ENST00000508169 PTPRAP18433 802 aa10.53□□□□□ -0.72
COL6A4P1-204ENST00000508169 RACK1P63244 317 aaKnown RBP10.53□□□□□ -0.72
COL6A4P1-204ENST00000508169 SRSF11Q05519 484 aaKnown RBP10.53□□□□□ -0.72
COL6A4P1-204ENST00000508169 NFX1Q12986 1120 aaKnown RBP10.53□□□□□ -0.72
COL6A4P1-204ENST00000508169 RPS26P11Q5JNZ5 115 aaPredicted RBP10.53□□□□□ -0.72
COL6A4P1-204ENST00000508169 PSAPL1Q6NUJ1 521 aa10.53□□□□□ -0.72
COL6A4P1-204ENST00000508169 SRA1Q9HD15 236 aaKnown RBP10.53□□□□□ -0.72
COL6A4P1-204ENST00000508169 USP35Q9P2H5 1018 aa10.53□□□□□ -0.72
COL6A4P1-204ENST00000508169 ERBB4Q15303 1308 aa10.53□□□□□ -0.72
COL6A4P1-204ENST00000508169 MAP3K10Q02779 954 aa10.52□□□□□ -0.73
COL6A4P1-204ENST00000508169 IRF7Q92985 503 aa10.52□□□□□ -0.73
COL6A4P1-204ENST00000508169 TINF2Q9BSI4 451 aa10.52□□□□□ -0.73
COL6A4P1-204ENST00000508169 RSRP1Q9BUV0 290 aa10.52□□□□□ -0.73
COL6A4P1-204ENST00000508169 COPRSQ9NQ92 184 aa10.52□□□□□ -0.73
COL6A4P1-204ENST00000508169 KBTBD4Q9NVX7 518 aa10.52□□□□□ -0.73
COL6A4P1-204ENST00000508169 TRIM33Q9UPN9 1127 aa10.52□□□□□ -0.73
COL6A4P1-204ENST00000508169 RLBP1P12271 317 aa10.51□□□□□ -0.73
COL6A4P1-204ENST00000508169 PWP1Q13610 501 aa10.51□□□□□ -0.73
COL6A4P1-204ENST00000508169 SREK1Q8WXA9 508 aaKnown RBP10.51□□□□□ -0.73
COL6A4P1-204ENST00000508169 TTC9Q92623 222 aa10.51□□□□□ -0.73
COL6A4P1-204ENST00000508169 TRIM56Q9BRZ2 755 aaKnown RBP10.51□□□□□ -0.73
COL6A4P1-204ENST00000508169 LACRTQ9GZZ8 138 aa10.51□□□□□ -0.73
COL6A4P1-204ENST00000508169 ADAM19Q9H013 955 aa10.51□□□□□ -0.73
COL6A4P1-204ENST00000508169 CLEC4MQ9H2X3 399 aaPredicted RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms