RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 RIMBP2O15034 1052 aa24.68■■□□□ 1.54
USP53-203ENST00000507597 FGFR2P21802 821 aa24.68■■□□□ 1.54
USP53-203ENST00000507597 RASSF7Q02833 373 aa24.68■■□□□ 1.54
USP53-203ENST00000507597 COA1Q9GZY4 146 aa24.68■■□□□ 1.54
USP53-203ENST00000507597 FER1L6Q2WGJ9 1857 aa24.67■■□□□ 1.54
USP53-203ENST00000507597 A0A1B0GUL7 405 aa24.67■■□□□ 1.54
USP53-203ENST00000507597 IFIT2P09913 472 aaKnown RBP24.67■■□□□ 1.54
USP53-203ENST00000507597 HIBADHP31937 336 aaKnown RBP24.67■■□□□ 1.54
USP53-203ENST00000507597 AOC3Q16853 763 aa24.67■■□□□ 1.54
USP53-203ENST00000507597 TNNI3KQ59H18 835 aa24.67■■□□□ 1.54
USP53-203ENST00000507597 PODNQ7Z5L7 613 aa24.67■■□□□ 1.54
USP53-203ENST00000507597 PPP4R2Q9NY27 417 aa24.67■■□□□ 1.54
USP53-203ENST00000507597 FPGT-TNNI3KV9GXZ4 949 aa24.67■■□□□ 1.54
USP53-203ENST00000507597 SMC5Q8IY18 1101 aa24.66■■□□□ 1.54
USP53-203ENST00000507597 RNF181Q9P0P0 153 aa24.66■■□□□ 1.54
USP53-203ENST00000507597 IGHDP01880 384 aa24.65■■□□□ 1.54
USP53-203ENST00000507597 CCDC158Q5M9N0 1113 aa24.65■■□□□ 1.54
USP53-203ENST00000507597 ANKRD45Q5TZF3 282 aa24.65■■□□□ 1.54
USP53-203ENST00000507597 ZC3H4Q9UPT8 1303 aaKnown RBP24.64■■□□□ 1.54
USP53-203ENST00000507597 FRAT2O75474 233 aaPredicted RBP24.64■■□□□ 1.54
USP53-203ENST00000507597 EIF6P56537 245 aaKnown RBP24.64■■□□□ 1.54
USP53-203ENST00000507597 TIMM10P62072 90 aa24.64■■□□□ 1.54
USP53-203ENST00000507597 C9orf131Q5VYM1 1079 aa24.64■■□□□ 1.54
USP53-203ENST00000507597 AACSQ86V21 672 aa24.64■■□□□ 1.54
USP53-203ENST00000507597 CENPQQ7L2Z9 268 aaPredicted RBP24.63■■□□□ 1.53
USP53-203ENST00000507597 SLC51AQ86UW1 340 aa24.63■■□□□ 1.53
USP53-203ENST00000507597 XAGE2Q96GT9 111 aa24.63■■□□□ 1.53
USP53-203ENST00000507597 GPATCH3Q96I76 525 aa24.63■■□□□ 1.53
USP53-203ENST00000507597 IL1RAPL2Q9NP60 686 aa24.63■■□□□ 1.53
USP53-203ENST00000507597 ZNRF3Q9ULT6 936 aa24.63■■□□□ 1.53
USP53-203ENST00000507597 SNAP23O00161 211 aa24.62■■□□□ 1.53
USP53-203ENST00000507597 LTBP1Q14766 1721 aa24.61■■□□□ 1.53
USP53-203ENST00000507597 UQCRFS1P1P0C7P4 283 aa24.61■■□□□ 1.53
USP53-203ENST00000507597 FBXO33Q7Z6M2 555 aa24.61■■□□□ 1.53
USP53-203ENST00000507597 FAM84BQ96KN1 310 aaPredicted RBP24.61■■□□□ 1.53
USP53-203ENST00000507597 GPR101Q96P66 508 aaPredicted RBP24.61■■□□□ 1.53
USP53-203ENST00000507597 CD209Q9NNX6 404 aa24.61■■□□□ 1.53
USP53-203ENST00000507597 ZNF609O15014 1411 aa24.61■■□□□ 1.53
USP53-203ENST00000507597 DUOX1Q9NRD9 1551 aa24.6■■□□□ 1.53
USP53-203ENST00000507597 SEMA3EO15041 775 aa24.6■■□□□ 1.53
USP53-203ENST00000507597 ECE2O60344 883 aa24.6■■□□□ 1.53
USP53-203ENST00000507597 TNIP1Q15025 636 aa24.6■■□□□ 1.53
USP53-203ENST00000507597 DOK7Q18PE1 504 aa24.6■■□□□ 1.53
USP53-203ENST00000507597 DPY19L2Q6NUT2 758 aa24.6■■□□□ 1.53
USP53-203ENST00000507597 EAF2Q96CJ1 260 aaPredicted RBP24.6■■□□□ 1.53
USP53-203ENST00000507597 IL1R1P14778 569 aa24.59■■□□□ 1.53
USP53-203ENST00000507597 GYG1P46976 350 aa24.59■■□□□ 1.53
USP53-203ENST00000507597 TTC39AQ5SRH9 613 aa24.59■■□□□ 1.53
USP53-203ENST00000507597 CCDC8Q9H0W5 538 aaPredicted RBP24.59■■□□□ 1.53
USP53-203ENST00000507597 BCL11AQ9H165 835 aa24.59■■□□□ 1.53
USP53-203ENST00000507597 DBNDD1Q9H9R9 158 aa24.59■■□□□ 1.53
USP53-203ENST00000507597 ZBTB22O15209 634 aa24.58■■□□□ 1.53
USP53-203ENST00000507597 BCAMP50895 628 aa24.58■■□□□ 1.53
USP53-203ENST00000507597 B4GALNT3Q6L9W6 998 aa24.58■■□□□ 1.53
USP53-203ENST00000507597 TXNRD3Q86VQ6 643 aa24.58■■□□□ 1.53
USP53-203ENST00000507597 DENND2AQ9ULE3 1009 aa24.58■■□□□ 1.53
USP53-203ENST00000507597 WTIPA6NIX2 430 aaPredicted RBP24.57■■□□□ 1.52
USP53-203ENST00000507597 FZD9O00144 591 aa24.57■■□□□ 1.52
USP53-203ENST00000507597 NUCB1Q02818 461 aa24.57■■□□□ 1.52
USP53-203ENST00000507597 CCDC102BQ68D86 513 aa24.57■■□□□ 1.52
USP53-203ENST00000507597 CHD1LQ86WJ1 897 aa24.57■■□□□ 1.52
USP53-203ENST00000507597 IRS2Q9Y4H2 1338 aa24.57■■□□□ 1.52
USP53-203ENST00000507597 SMARCA5O60264 1052 aaPredicted RBP24.56■■□□□ 1.52
USP53-203ENST00000507597 KLRK1P26718 216 aa24.56■■□□□ 1.52
USP53-203ENST00000507597 CIAPIN1Q6FI81 312 aa24.56■■□□□ 1.52
USP53-203ENST00000507597 TDRD7Q8NHU6 1098 aaKnown RBP24.56■■□□□ 1.52
USP53-203ENST00000507597 DBNDD2Q9BQY9 259 aa24.56■■□□□ 1.52
USP53-203ENST00000507597 A0A1B0GUL6 1792 aa24.56■■□□□ 1.52
USP53-203ENST00000507597 USP17L3A6NCW0 530 aa24.55■■□□□ 1.52
USP53-203ENST00000507597 USP17L4A6NCW7 530 aa24.55■■□□□ 1.52
USP53-203ENST00000507597 USP17L1Q7RTZ2 530 aa24.55■■□□□ 1.52
USP53-203ENST00000507597 TBC1D22AQ8WUA7 517 aa24.55■■□□□ 1.52
USP53-203ENST00000507597 ZNF512BQ96KM6 892 aaPredicted RBP24.55■■□□□ 1.52
USP53-203ENST00000507597 ERC2O15083 957 aa24.54■■□□□ 1.52
USP53-203ENST00000507597 ADORA1P30542 326 aa24.54■■□□□ 1.52
USP53-203ENST00000507597 PRELPP51888 382 aa24.54■■□□□ 1.52
USP53-203ENST00000507597 STRIP1Q5VSL9 837 aa24.54■■□□□ 1.52
USP53-203ENST00000507597 TTLL5Q6EMB2 1281 aa24.54■■□□□ 1.52
USP53-203ENST00000507597 DBNLQ9UJU6 430 aaKnown RBP24.54■■□□□ 1.52
USP53-203ENST00000507597 PHKA1P46020 1223 aa24.53■■□□□ 1.52
USP53-203ENST00000507597 ZGPATQ8N5A5 531 aaKnown RBP24.53■■□□□ 1.52
USP53-203ENST00000507597 WDR66Q8TBY9 1149 aa24.53■■□□□ 1.52
USP53-203ENST00000507597 FBXW7Q969H0 707 aa24.53■■□□□ 1.52
USP53-203ENST00000507597 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.53■■□□□ 1.52
USP53-203ENST00000507597 MYO3BQ8WXR4 1341 aa24.53■■□□□ 1.52
USP53-203ENST00000507597 ARID4AP29374 1257 aaPredicted RBP24.52■■□□□ 1.52
USP53-203ENST00000507597 FKBP1AP62942 108 aaKnown RBP24.52■■□□□ 1.52
USP53-203ENST00000507597 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.52■■□□□ 1.52
USP53-203ENST00000507597 LNPKQ9C0E8 428 aa24.52■■□□□ 1.52
USP53-203ENST00000507597 ECHDC1Q9NTX5 307 aa24.52■■□□□ 1.52
USP53-203ENST00000507597 TTC41PQ6P2S7 1318 aa24.52■■□□□ 1.52
USP53-203ENST00000507597 MMP14P50281 582 aa24.51■■□□□ 1.51
USP53-203ENST00000507597 GTF2IP78347 998 aa24.51■■□□□ 1.51
USP53-203ENST00000507597 GPC2Q8N158 579 aa24.51■■□□□ 1.51
USP53-203ENST00000507597 PDS5AQ29RF7 1337 aaKnown RBP24.51■■□□□ 1.51
USP53-203ENST00000507597 FAM205AQ6ZU69 1335 aa24.51■■□□□ 1.51
USP53-203ENST00000507597 SBF1O95248 1867 aa24.51■■□□□ 1.51
USP53-203ENST00000507597 IGSF3O75054 1194 aa24.5■■□□□ 1.51
USP53-203ENST00000507597 RAD17O75943 681 aa24.5■■□□□ 1.51
USP53-203ENST00000507597 RPS12P25398 132 aaKnown RBP24.5■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms