RNA–Protein interactions for RNA: ENST00000507316.1

TUSC3-205, Transcript of tumor suppressor candidate 3, human

TSL 3

Gene TUSC3, Length 573 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TUSC3-205	ENST00000507316	MICALL1	Q8N3F8	863 aa		6.3	□□□□□ -1.4
TUSC3-205	ENST00000507316	MKL1	Q969V6	931 aa		6.3	□□□□□ -1.4
TUSC3-205	ENST00000507316	TIGD1	Q96MW7	591 aa		6.3	□□□□□ -1.4
TUSC3-205	ENST00000507316	FAM210A	Q96ND0	272 aa		6.3	□□□□□ -1.4
TUSC3-205	ENST00000507316	BRD7	Q9NPI1	651 aa		6.3	□□□□□ -1.4
TUSC3-205	ENST00000507316	ADGRE2	Q9UHX3	823 aa		6.3	□□□□□ -1.4
TUSC3-205	ENST00000507316	CEP83	Q9Y592	693 aa		6.3	□□□□□ -1.4
TUSC3-205	ENST00000507316	SCAPER	Q9BY12	1400 aa		6.3	□□□□□ -1.4
TUSC3-205	ENST00000507316	PEG3	Q9GZU2	1588 aa		6.3	□□□□□ -1.4
TUSC3-205	ENST00000507316		A0A0A0MRY4	1105 aa		6.29	□□□□□ -1.4
TUSC3-205	ENST00000507316	PLEKHD1	A6NEE1	506 aa		6.29	□□□□□ -1.4
TUSC3-205	ENST00000507316	ALB	P02768	609 aa		6.29	□□□□□ -1.4
TUSC3-205	ENST00000507316	HMGN5	P82970	282 aa	Known RBP	6.29	□□□□□ -1.4
TUSC3-205	ENST00000507316	SFSWAP	Q12872	951 aa	Known RBP	6.29	□□□□□ -1.4
TUSC3-205	ENST00000507316	DPYD	Q12882	1025 aa		6.29	□□□□□ -1.4
TUSC3-205	ENST00000507316	BECN1	Q14457	450 aa		6.29	□□□□□ -1.4
TUSC3-205	ENST00000507316	CRTC2	Q53ET0	693 aa	Predicted RBP	6.29	□□□□□ -1.4
TUSC3-205	ENST00000507316	C1orf53	Q5VUE5	145 aa		6.29	□□□□□ -1.4
TUSC3-205	ENST00000507316	FAM43B	Q6ZT52	329 aa	Predicted RBP	6.29	□□□□□ -1.4
TUSC3-205	ENST00000507316	ALDH16A1	Q8IZ83	802 aa		6.29	□□□□□ -1.4
TUSC3-205	ENST00000507316	PDCL2	Q8N4E4	241 aa		6.29	□□□□□ -1.4
TUSC3-205	ENST00000507316	FEZ1	Q99689	392 aa		6.29	□□□□□ -1.4
TUSC3-205	ENST00000507316	PAIP2	Q9BPZ3	127 aa	Known RBP	6.29	□□□□□ -1.4
TUSC3-205	ENST00000507316	BACH2	Q9BYV9	841 aa		6.29	□□□□□ -1.4
TUSC3-205	ENST00000507316	FEZ2	Q9UHY8	353 aa	Predicted RBP	6.29	□□□□□ -1.4
TUSC3-205	ENST00000507316	NACAD	O15069	1562 aa		6.28	□□□□□ -1.4
TUSC3-205	ENST00000507316	USP17L15	C9J2P7	530 aa		6.28	□□□□□ -1.4
TUSC3-205	ENST00000507316	USP17L10	C9JJH3	530 aa		6.28	□□□□□ -1.4
TUSC3-205	ENST00000507316	USP17L13	C9JLJ4	530 aa		6.28	□□□□□ -1.4
TUSC3-205	ENST00000507316	USP17L12	C9JPN9	530 aa		6.28	□□□□□ -1.4
TUSC3-205	ENST00000507316	USP17L11	C9JVI0	530 aa		6.28	□□□□□ -1.4
TUSC3-205	ENST00000507316	USP17L21	D6R901	530 aa		6.28	□□□□□ -1.4
TUSC3-205	ENST00000507316	USP17L18	D6R9N7	530 aa		6.28	□□□□□ -1.4
TUSC3-205	ENST00000507316	USP17L22	D6RA61	530 aa		6.28	□□□□□ -1.4
TUSC3-205	ENST00000507316	USP17L17	D6RBQ6	530 aa		6.28	□□□□□ -1.4
TUSC3-205	ENST00000507316	USP17L19	D6RCP7	530 aa		6.28	□□□□□ -1.4
TUSC3-205	ENST00000507316	USP17L20	D6RJB6	530 aa		6.28	□□□□□ -1.4
TUSC3-205	ENST00000507316	ZNF865	P0CJ78	1059 aa	Predicted RBP	6.28	□□□□□ -1.4
TUSC3-205	ENST00000507316	TBC1D8B	Q0IIM8	1120 aa		6.28	□□□□□ -1.4
TUSC3-205	ENST00000507316	USP17L24	Q0WX57	530 aa		6.28	□□□□□ -1.4
TUSC3-205	ENST00000507316	TRDN	Q13061	729 aa		6.28	□□□□□ -1.4
TUSC3-205	ENST00000507316	HDAC1	Q13547	482 aa	Predicted RBP	6.28	□□□□□ -1.4
TUSC3-205	ENST00000507316	RAB44	Q7Z6P3	723 aa	Predicted RBP	6.28	□□□□□ -1.4
TUSC3-205	ENST00000507316	RETREG2	Q8NC44	543 aa		6.28	□□□□□ -1.4
TUSC3-205	ENST00000507316	SUSD3	Q96L08	255 aa		6.28	□□□□□ -1.4
TUSC3-205	ENST00000507316	NCAPG	Q9BPX3	1015 aa		6.28	□□□□□ -1.4
TUSC3-205	ENST00000507316	KRTAP9-3	Q9BYQ3	159 aa		6.28	□□□□□ -1.4
TUSC3-205	ENST00000507316	PRDM16	Q9HAZ2	1276 aa		6.28	□□□□□ -1.4
TUSC3-205	ENST00000507316	STARD13	Q9Y3M8	1113 aa		6.28	□□□□□ -1.4
TUSC3-205	ENST00000507316	UNC13A	Q9UPW8	1703 aa		6.28	□□□□□ -1.4
TUSC3-205	ENST00000507316	GOLIM4	O00461	696 aa		6.27	□□□□□ -1.41
TUSC3-205	ENST00000507316	CCDC172	P0C7W6	258 aa		6.27	□□□□□ -1.41
TUSC3-205	ENST00000507316	RFX1	P22670	979 aa		6.27	□□□□□ -1.41
TUSC3-205	ENST00000507316	MSN	P26038	577 aa	Known RBP	6.27	□□□□□ -1.41
TUSC3-205	ENST00000507316	HIRA	P54198	1017 aa	Predicted RBP	6.27	□□□□□ -1.41
TUSC3-205	ENST00000507316	SPEM2	Q0P670	501 aa		6.27	□□□□□ -1.41
TUSC3-205	ENST00000507316	PTK7	Q13308	1070 aa		6.27	□□□□□ -1.41
TUSC3-205	ENST00000507316	HIF1A	Q16665	826 aa		6.27	□□□□□ -1.41
TUSC3-205	ENST00000507316	ZSCAN30	Q86W11	494 aa		6.27	□□□□□ -1.41
TUSC3-205	ENST00000507316	ANKMY2	Q8IV38	441 aa		6.27	□□□□□ -1.41
TUSC3-205	ENST00000507316	ZNF280C	Q8ND82	737 aa		6.27	□□□□□ -1.41
TUSC3-205	ENST00000507316	GAS2L2	Q8NHY3	880 aa		6.27	□□□□□ -1.41
TUSC3-205	ENST00000507316	VTI1A	Q96AJ9	217 aa		6.27	□□□□□ -1.41
TUSC3-205	ENST00000507316	SLC30A3	Q99726	388 aa		6.27	□□□□□ -1.41
TUSC3-205	ENST00000507316	MDFI	Q99750	246 aa		6.27	□□□□□ -1.41
TUSC3-205	ENST00000507316	IGFLR1	Q9H665	355 aa		6.27	□□□□□ -1.41
TUSC3-205	ENST00000507316	SLC52A1	Q9NWF4	448 aa		6.27	□□□□□ -1.41
TUSC3-205	ENST00000507316	IBTK	Q9P2D0	1353 aa	Predicted RBP	6.27	□□□□□ -1.41
TUSC3-205	ENST00000507316	RNF123	Q5XPI4	1314 aa		6.26	□□□□□ -1.41
TUSC3-205	ENST00000507316	FAM196B	A6NMK8	535 aa		6.26	□□□□□ -1.41
TUSC3-205	ENST00000507316	VGLL3	A8MV65	326 aa		6.26	□□□□□ -1.41
TUSC3-205	ENST00000507316	TULP2	O00295	520 aa		6.26	□□□□□ -1.41
TUSC3-205	ENST00000507316	C21orf2	O43822	256 aa		6.26	□□□□□ -1.41
TUSC3-205	ENST00000507316	DKK1	O94907	266 aa		6.26	□□□□□ -1.41
TUSC3-205	ENST00000507316	LIG1	P18858	919 aa		6.26	□□□□□ -1.41
TUSC3-205	ENST00000507316	CCDC173	Q0VFZ6	552 aa		6.26	□□□□□ -1.41
TUSC3-205	ENST00000507316	CDCA8	Q53HL2	280 aa		6.26	□□□□□ -1.41
TUSC3-205	ENST00000507316	KANK4	Q5T7N3	995 aa	Predicted RBP	6.26	□□□□□ -1.41
TUSC3-205	ENST00000507316	BHMT	Q93088	406 aa		6.26	□□□□□ -1.41
TUSC3-205	ENST00000507316	C2orf49	Q9BVC5	232 aa	Predicted RBP	6.26	□□□□□ -1.41
TUSC3-205	ENST00000507316	SMC4	Q9NTJ3	1288 aa		6.26	□□□□□ -1.41
TUSC3-205	ENST00000507316	FAM13B	Q9NYF5	915 aa		6.26	□□□□□ -1.41
TUSC3-205	ENST00000507316	KCNH4	Q9UQ05	1017 aa		6.26	□□□□□ -1.41
TUSC3-205	ENST00000507316	SH3BP1	Q9Y3L3	701 aa		6.26	□□□□□ -1.41
TUSC3-205	ENST00000507316	MRVI1	Q9Y6F6	885 aa		6.26	□□□□□ -1.41
TUSC3-205	ENST00000507316	SMARCA2	P51531	1590 aa		6.26	□□□□□ -1.41
TUSC3-205	ENST00000507316	ZNF500	O60304	480 aa	Predicted RBP	6.25	□□□□□ -1.41
TUSC3-205	ENST00000507316	TYRO3	Q06418	890 aa		6.25	□□□□□ -1.41
TUSC3-205	ENST00000507316	TMED8	Q6PL24	325 aa	Predicted RBP	6.25	□□□□□ -1.41
TUSC3-205	ENST00000507316	SASS6	Q6UVJ0	657 aa		6.25	□□□□□ -1.41
TUSC3-205	ENST00000507316	TSHZ1	Q6ZSZ6	1077 aa		6.25	□□□□□ -1.41
TUSC3-205	ENST00000507316	C7orf43	Q8WVR3	580 aa		6.25	□□□□□ -1.41
TUSC3-205	ENST00000507316	WFDC12	Q8WWY7	111 aa		6.25	□□□□□ -1.41
TUSC3-205	ENST00000507316	PRIMPOL	Q96LW4	560 aa		6.25	□□□□□ -1.41
TUSC3-205	ENST00000507316	PNMA5	Q96PV4	448 aa		6.25	□□□□□ -1.41
TUSC3-205	ENST00000507316	TACO1	Q9BSH4	297 aa	Known RBP	6.25	□□□□□ -1.41
TUSC3-205	ENST00000507316	GOLGA6L6	A8MZA4	724 aa		6.24	□□□□□ -1.41
TUSC3-205	ENST00000507316	GOLGA6L22	H0YM25	854 aa		6.24	□□□□□ -1.41
TUSC3-205	ENST00000507316	PRRG2	O14669	202 aa		6.24	□□□□□ -1.41
TUSC3-205	ENST00000507316	SIN3B	O75182	1162 aa		6.24	□□□□□ -1.41

Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms