RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 IFIT2P09913 472 aaKnown RBP17.43■□□□□ 0.38
RNF4-208ENST00000507247 SLC5A1P13866 664 aa17.43■□□□□ 0.38
RNF4-208ENST00000507247 ATP2B4P23634 1241 aa17.43■□□□□ 0.38
RNF4-208ENST00000507247 CC2D2BQ6DHV5 1058 aa17.43■□□□□ 0.38
RNF4-208ENST00000507247 TBC1D16Q8TBP0 767 aa17.43■□□□□ 0.38
RNF4-208ENST00000507247 XAGE2Q96GT9 111 aa17.43■□□□□ 0.38
RNF4-208ENST00000507247 GGA1Q9UJY5 639 aa17.43■□□□□ 0.38
RNF4-208ENST00000507247 IFIT1P09914 478 aaKnown RBP17.42■□□□□ 0.38
RNF4-208ENST00000507247 KCNJ4P48050 445 aa17.42■□□□□ 0.38
RNF4-208ENST00000507247 CCDC93Q567U6 631 aa17.42■□□□□ 0.38
RNF4-208ENST00000507247 DPP8Q6V1X1 898 aaPredicted RBP17.42■□□□□ 0.38
RNF4-208ENST00000507247 PLEKHM2Q8IWE5 1019 aa17.42■□□□□ 0.38
RNF4-208ENST00000507247 TMX4Q9H1E5 349 aaPredicted RBP17.42■□□□□ 0.38
RNF4-208ENST00000507247 MYH13Q9UKX3 1938 aa17.41■□□□□ 0.38
RNF4-208ENST00000507247 RGS3P49796 1198 aa17.41■□□□□ 0.38
RNF4-208ENST00000507247 GPR162Q16538 588 aa17.41■□□□□ 0.38
RNF4-208ENST00000507247 TSHZ3Q63HK5 1081 aa17.41■□□□□ 0.38
RNF4-208ENST00000507247 TXNRD3Q86VQ6 643 aa17.41■□□□□ 0.38
RNF4-208ENST00000507247 C6orf229H3BNL8 230 aa17.4■□□□□ 0.38
RNF4-208ENST00000507247 MX1P20591 662 aa17.4■□□□□ 0.38
RNF4-208ENST00000507247 PDE1AP54750 535 aa17.4■□□□□ 0.38
RNF4-208ENST00000507247 PELP1Q8IZL8 1130 aaKnown RBP17.4■□□□□ 0.38
RNF4-208ENST00000507247 RTFDC1Q9BY42 306 aaPredicted RBP17.4■□□□□ 0.38
RNF4-208ENST00000507247 AKAP11Q9UKA4 1901 aa17.4■□□□□ 0.38
RNF4-208ENST00000507247 GYG1P46976 350 aa17.39■□□□□ 0.37
RNF4-208ENST00000507247 SOGA3Q5TF21 947 aa17.39■□□□□ 0.37
RNF4-208ENST00000507247 C15orf52Q6ZUT6 534 aaKnown RBP17.39■□□□□ 0.37
RNF4-208ENST00000507247 RTKN2Q8IZC4 609 aa17.39■□□□□ 0.37
RNF4-208ENST00000507247 STAP2Q9UGK3 403 aa17.39■□□□□ 0.37
RNF4-208ENST00000507247 CCDC88AQ3V6T2 1871 aa17.39■□□□□ 0.37
RNF4-208ENST00000507247 MED23Q9ULK4 1368 aa17.39■□□□□ 0.37
RNF4-208ENST00000507247 YBX3P16989 372 aaKnown RBP eCLIP17.38■□□□□ 0.37
RNF4-208ENST00000507247 PHKA1P46020 1223 aa17.38■□□□□ 0.37
RNF4-208ENST00000507247 BCAMP50895 628 aa17.38■□□□□ 0.37
RNF4-208ENST00000507247 GRIPAP1Q4V328 841 aa17.38■□□□□ 0.37
RNF4-208ENST00000507247 CCDC102BQ68D86 513 aa17.38■□□□□ 0.37
RNF4-208ENST00000507247 FAM84BQ96KN1 310 aaPredicted RBP17.38■□□□□ 0.37
RNF4-208ENST00000507247 NFKBIEO00221 500 aa17.37■□□□□ 0.37
RNF4-208ENST00000507247 FBXO33Q7Z6M2 555 aa17.37■□□□□ 0.37
RNF4-208ENST00000507247 PI4K2BQ8TCG2 481 aa17.37■□□□□ 0.37
RNF4-208ENST00000507247 PSMD1Q99460 953 aa17.37■□□□□ 0.37
RNF4-208ENST00000507247 OSBPL3Q9H4L5 887 aa17.37■□□□□ 0.37
RNF4-208ENST00000507247 ECHDC1Q9NTX5 307 aa17.37■□□□□ 0.37
RNF4-208ENST00000507247 TTC41PQ6P2S7 1318 aa17.37■□□□□ 0.37
RNF4-208ENST00000507247 RIMBP2O15034 1052 aa17.36■□□□□ 0.37
RNF4-208ENST00000507247 FKBP4Q02790 459 aaKnown RBP eCLIP17.36■□□□□ 0.37
RNF4-208ENST00000507247 GORABQ5T7V8 394 aa17.36■□□□□ 0.37
RNF4-208ENST00000507247 ZNF784Q8NCA9 323 aaPredicted RBP17.36■□□□□ 0.37
RNF4-208ENST00000507247 AOX1Q06278 1338 aa17.36■□□□□ 0.37
RNF4-208ENST00000507247 GOLGB1Q14789 3259 aaKnown RBP17.36■□□□□ 0.37
RNF4-208ENST00000507247 COL4A5P29400 1685 aa17.36■□□□□ 0.37
RNF4-208ENST00000507247 SBF1O95248 1867 aa17.35■□□□□ 0.37
RNF4-208ENST00000507247 AK9Q5TCS8 1911 aa17.35■□□□□ 0.37
RNF4-208ENST00000507247 ARID4AP29374 1257 aaPredicted RBP17.35■□□□□ 0.37
RNF4-208ENST00000507247 SCARF1Q14162 830 aa17.35■□□□□ 0.37
RNF4-208ENST00000507247 WASHC4Q2M389 1173 aa17.35■□□□□ 0.37
RNF4-208ENST00000507247 CCDC158Q5M9N0 1113 aa17.35■□□□□ 0.37
RNF4-208ENST00000507247 TTC39AQ5SRH9 613 aa17.35■□□□□ 0.37
RNF4-208ENST00000507247 SUPT20HQ8NEM7 779 aa17.35■□□□□ 0.37
RNF4-208ENST00000507247 GPATCH3Q96I76 525 aa17.35■□□□□ 0.37
RNF4-208ENST00000507247 EYA3Q99504 573 aa17.35■□□□□ 0.37
RNF4-208ENST00000507247 COL1A1P02452 1464 aaPredicted RBP17.35■□□□□ 0.37
RNF4-208ENST00000507247 ZNF646O15015 1829 aaPredicted RBP17.35■□□□□ 0.37
RNF4-208ENST00000507247 MYO5AQ9Y4I1 1855 aaKnown RBP17.35■□□□□ 0.37
RNF4-208ENST00000507247 ATP5JP18859 108 aa17.34■□□□□ 0.37
RNF4-208ENST00000507247 HIBADHP31937 336 aaKnown RBP17.34■□□□□ 0.37
RNF4-208ENST00000507247 RASSF7Q02833 373 aa17.34■□□□□ 0.37
RNF4-208ENST00000507247 SCN9AQ15858 1988 aa17.34■□□□□ 0.37
RNF4-208ENST00000507247 AOC3Q16853 763 aa17.34■□□□□ 0.37
RNF4-208ENST00000507247 CAVIN4Q5BKX8 364 aa17.34■□□□□ 0.37
RNF4-208ENST00000507247 ZC3H12CQ9C0D7 883 aaKnown RBP17.34■□□□□ 0.37
RNF4-208ENST00000507247 TAOK3Q9H2K8 898 aa17.34■□□□□ 0.37
RNF4-208ENST00000507247 BOLA2Q9H3K6 86 aa17.34■□□□□ 0.37
RNF4-208ENST00000507247 ZNF277Q9NRM2 450 aaPredicted RBP17.34■□□□□ 0.37
RNF4-208ENST00000507247 LTBP3Q9NS15 1303 aa17.34■□□□□ 0.37
RNF4-208ENST00000507247 IQSEC3Q9UPP2 1182 aaPredicted RBP17.34■□□□□ 0.37
RNF4-208ENST00000507247 GSPT1P15170 499 aaKnown RBP17.33■□□□□ 0.36
RNF4-208ENST00000507247 MCAMP43121 646 aa17.33■□□□□ 0.36
RNF4-208ENST00000507247 PRELPP51888 382 aa17.33■□□□□ 0.36
RNF4-208ENST00000507247 KIAA2012Q0VF49 1180 aa17.33■□□□□ 0.36
RNF4-208ENST00000507247 TTC22Q5TAA0 569 aa17.33■□□□□ 0.36
RNF4-208ENST00000507247 PI16Q6UXB8 463 aa17.33■□□□□ 0.36
RNF4-208ENST00000507247 ZNF804AQ7Z570 1209 aa17.33■□□□□ 0.36
RNF4-208ENST00000507247 ZNF512BQ96KM6 892 aaPredicted RBP17.33■□□□□ 0.36
RNF4-208ENST00000507247 NDUFB9Q9Y6M9 179 aa17.33■□□□□ 0.36
RNF4-208ENST00000507247 DICER1Q9UPY3 1922 aaKnown RBP17.33■□□□□ 0.36
RNF4-208ENST00000507247 PSME4Q14997 1843 aa17.33■□□□□ 0.36
RNF4-208ENST00000507247 ERC2O15083 957 aa17.32■□□□□ 0.36
RNF4-208ENST00000507247 PPIP5K2O43314 1243 aa17.32■□□□□ 0.36
RNF4-208ENST00000507247 GLRX3O76003 335 aaKnown RBP17.32■□□□□ 0.36
RNF4-208ENST00000507247 UQCRFS1P1P0C7P4 283 aa17.32■□□□□ 0.36
RNF4-208ENST00000507247 RASGRF1Q13972 1273 aa17.32■□□□□ 0.36
RNF4-208ENST00000507247 DOK7Q18PE1 504 aa17.32■□□□□ 0.36
RNF4-208ENST00000507247 VPS37DQ86XT2 251 aa17.32■□□□□ 0.36
RNF4-208ENST00000507247 TDRD7Q8NHU6 1098 aaKnown RBP17.32■□□□□ 0.36
RNF4-208ENST00000507247 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.32■□□□□ 0.36
RNF4-208ENST00000507247 CD209Q9NNX6 404 aa17.32■□□□□ 0.36
RNF4-208ENST00000507247 DOCK2Q92608 1830 aa17.31■□□□□ 0.36
RNF4-208ENST00000507247 IL1R1P14778 569 aa17.31■□□□□ 0.36
RNF4-208ENST00000507247 IARSP41252 1262 aaKnown RBP17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms