RNA–Protein interactions for RNA: ENST00000506965.5

DDX41-206, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-206ENST00000506965 H7C1W4 665 aa17.26■□□□□ 0.35
DDX41-206ENST00000506965 PDE4DIPQ5VU43 2346 aa17.26■□□□□ 0.35
DDX41-206ENST00000506965 HTTP42858 3142 aa17.25■□□□□ 0.35
DDX41-206ENST00000506965 USP17L3A6NCW0 530 aa17.25■□□□□ 0.35
DDX41-206ENST00000506965 USP17L4A6NCW7 530 aa17.25■□□□□ 0.35
DDX41-206ENST00000506965 SNAP23O00161 211 aa17.25■□□□□ 0.35
DDX41-206ENST00000506965 TRPA1O75762 1119 aa17.25■□□□□ 0.35
DDX41-206ENST00000506965 USP17L8P0C7I0 530 aa17.25■□□□□ 0.35
DDX41-206ENST00000506965 ATP2B4P23634 1241 aa17.25■□□□□ 0.35
DDX41-206ENST00000506965 USP17L1Q7RTZ2 530 aa17.25■□□□□ 0.35
DDX41-206ENST00000506965 SULF1Q8IWU6 871 aa17.25■□□□□ 0.35
DDX41-206ENST00000506965 BSDC1Q9NW68 430 aaPredicted RBP17.25■□□□□ 0.35
DDX41-206ENST00000506965 CCT4P50991 539 aaKnown RBP17.24■□□□□ 0.35
DDX41-206ENST00000506965 UBE3BQ7Z3V4 1068 aa17.24■□□□□ 0.35
DDX41-206ENST00000506965 WWC1Q8IX03 1113 aa17.24■□□□□ 0.35
DDX41-206ENST00000506965 MLLT1Q03111 559 aaPredicted RBP17.23■□□□□ 0.35
DDX41-206ENST00000506965 CALD1Q05682 793 aaKnown RBP17.23■□□□□ 0.35
DDX41-206ENST00000506965 PODNQ7Z5L7 613 aa17.23■□□□□ 0.35
DDX41-206ENST00000506965 CCDC102AQ96A19 550 aa17.23■□□□□ 0.35
DDX41-206ENST00000506965 SAGE1Q9NXZ1 904 aa17.23■□□□□ 0.35
DDX41-206ENST00000506965 PITPNM2Q9BZ72 1349 aa17.22■□□□□ 0.35
DDX41-206ENST00000506965 WNT10BO00744 389 aa17.22■□□□□ 0.35
DDX41-206ENST00000506965 DDX58O95786 925 aaKnown RBP17.22■□□□□ 0.35
DDX41-206ENST00000506965 TWISTNBQ3B726 338 aaPredicted RBP17.22■□□□□ 0.35
DDX41-206ENST00000506965 ZBED3Q96IU2 234 aaPredicted RBP17.22■□□□□ 0.35
DDX41-206ENST00000506965 CDC5LQ99459 802 aaKnown RBP17.22■□□□□ 0.35
DDX41-206ENST00000506965 PCDHAC2Q9Y5I4 1007 aa17.22■□□□□ 0.35
DDX41-206ENST00000506965 SSC5DA1L4H1 1573 aa17.22■□□□□ 0.35
DDX41-206ENST00000506965 AOX1Q06278 1338 aa17.21■□□□□ 0.35
DDX41-206ENST00000506965 OTOFQ9HC10 1997 aa17.21■□□□□ 0.35
DDX41-206ENST00000506965 G3V3G9 751 aa17.21■□□□□ 0.35
DDX41-206ENST00000506965 UBE2Q2LH0YL09 131 aa17.21■□□□□ 0.35
DDX41-206ENST00000506965 SASH1O94885 1247 aa17.21■□□□□ 0.35
DDX41-206ENST00000506965 GCKRQ14397 625 aa17.21■□□□□ 0.35
DDX41-206ENST00000506965 CCDC27Q2M243 656 aa17.21■□□□□ 0.35
DDX41-206ENST00000506965 DCAF8Q5TAQ9 597 aa17.21■□□□□ 0.35
DDX41-206ENST00000506965 PLA2G12BQ9BX93 195 aa17.21■□□□□ 0.35
DDX41-206ENST00000506965 FZD1Q9UP38 647 aa17.21■□□□□ 0.35
DDX41-206ENST00000506965 CENPFP49454 3210 aa17.2■□□□□ 0.34
DDX41-206ENST00000506965 SLC34A2O95436 690 aa17.2■□□□□ 0.34
DDX41-206ENST00000506965 SLC4A2P04920 1241 aa17.2■□□□□ 0.34
DDX41-206ENST00000506965 CSF1RP07333 972 aa17.2■□□□□ 0.34
DDX41-206ENST00000506965 HSP90B1P14625 803 aaKnown RBP17.2■□□□□ 0.34
DDX41-206ENST00000506965 SPINK5Q9NQ38 1064 aaPredicted RBP17.2■□□□□ 0.34
DDX41-206ENST00000506965 FANCIQ9NVI1 1328 aa17.2■□□□□ 0.34
DDX41-206ENST00000506965 ITGA6P23229 1130 aa17.19■□□□□ 0.34
DDX41-206ENST00000506965 FLIIQ13045 1269 aa17.19■□□□□ 0.34
DDX41-206ENST00000506965 CERS5Q8N5B7 392 aa17.19■□□□□ 0.34
DDX41-206ENST00000506965 R3HDMLQ9H3Y0 253 aa17.19■□□□□ 0.34
DDX41-206ENST00000506965 SOX10P56693 466 aa17.18■□□□□ 0.34
DDX41-206ENST00000506965 FOXO4P98177 505 aa17.18■□□□□ 0.34
DDX41-206ENST00000506965 STRIP1Q5VSL9 837 aa17.18■□□□□ 0.34
DDX41-206ENST00000506965 BRCA2P51587 3418 aa17.18■□□□□ 0.34
DDX41-206ENST00000506965 ARAP2Q8WZ64 1704 aa17.18■□□□□ 0.34
DDX41-206ENST00000506965 MKI67P46013 3256 aaKnown RBP17.18■□□□□ 0.34
DDX41-206ENST00000506965 ZNF804BA4D1E1 1349 aa17.18■□□□□ 0.34
DDX41-206ENST00000506965 VAMP4O75379 141 aa17.17■□□□□ 0.34
DDX41-206ENST00000506965 FKBP1BP68106 108 aa17.17■□□□□ 0.34
DDX41-206ENST00000506965 CHRNDQ07001 517 aa17.17■□□□□ 0.34
DDX41-206ENST00000506965 EPHA10Q5JZY3 1008 aa17.17■□□□□ 0.34
DDX41-206ENST00000506965 KIAA0825Q8IV33 1275 aa17.17■□□□□ 0.34
DDX41-206ENST00000506965 COA1Q9GZY4 146 aa17.17■□□□□ 0.34
DDX41-206ENST00000506965 F6X3S4 739 aa17.16■□□□□ 0.34
DDX41-206ENST00000506965 HELBQ8NG08 1087 aaPredicted RBP17.16■□□□□ 0.34
DDX41-206ENST00000506965 DNAAF4Q8WXU2 420 aa17.16■□□□□ 0.34
DDX41-206ENST00000506965 FBXW7Q969H0 707 aa17.16■□□□□ 0.34
DDX41-206ENST00000506965 STK31Q9BXU1 1019 aa17.16■□□□□ 0.34
DDX41-206ENST00000506965 LEMD3Q9Y2U8 911 aa17.16■□□□□ 0.34
DDX41-206ENST00000506965 IL16Q14005 1332 aa17.16■□□□□ 0.34
DDX41-206ENST00000506965 TAF5LO75529 589 aa17.15■□□□□ 0.34
DDX41-206ENST00000506965 TBC1D8O95759 1140 aa17.15■□□□□ 0.34
DDX41-206ENST00000506965 GTF2IP78347 998 aa17.15■□□□□ 0.34
DDX41-206ENST00000506965 PTPN12Q05209 780 aaKnown RBP17.15■□□□□ 0.34
DDX41-206ENST00000506965 NEXNQ0ZGT2 675 aa17.15■□□□□ 0.34
DDX41-206ENST00000506965 MKRN3Q13064 507 aaKnown RBP17.15■□□□□ 0.34
DDX41-206ENST00000506965 TTLL5Q6EMB2 1281 aa17.14■□□□□ 0.33
DDX41-206ENST00000506965 LINS1Q8NG48 757 aa17.14■□□□□ 0.33
DDX41-206ENST00000506965 CD209Q9NNX6 404 aa17.14■□□□□ 0.33
DDX41-206ENST00000506965 IGHMBP2P38935 993 aaKnown RBP17.13■□□□□ 0.33
DDX41-206ENST00000506965 EXOSC9Q06265 439 aaKnown RBP17.13■□□□□ 0.33
DDX41-206ENST00000506965 FKBP5Q13451 457 aaPredicted RBP17.13■□□□□ 0.33
DDX41-206ENST00000506965 PRKG1Q13976 671 aa17.13■□□□□ 0.33
DDX41-206ENST00000506965 BEND3Q5T5X7 828 aa17.13■□□□□ 0.33
DDX41-206ENST00000506965 LDLRAD1Q5T700 205 aa17.13■□□□□ 0.33
DDX41-206ENST00000506965 CTU1Q7Z7A3 348 aaKnown RBP17.13■□□□□ 0.33
DDX41-206ENST00000506965 ZNF296Q8WUU4 475 aaPredicted RBP17.13■□□□□ 0.33
DDX41-206ENST00000506965 ZNF594Q96JF6 807 aaPredicted RBP17.13■□□□□ 0.33
DDX41-206ENST00000506965 TM4SF4P48230 202 aa17.12■□□□□ 0.33
DDX41-206ENST00000506965 JAG2Q9Y219 1238 aa17.12■□□□□ 0.33
DDX41-206ENST00000506965 SALL2Q9Y467 1007 aaPredicted RBP17.12■□□□□ 0.33
DDX41-206ENST00000506965 MYO3BQ8WXR4 1341 aa17.12■□□□□ 0.33
DDX41-206ENST00000506965 C15orf52Q6ZUT6 534 aaKnown RBP17.11■□□□□ 0.33
DDX41-206ENST00000506965 HPS5Q9UPZ3 1129 aa17.11■□□□□ 0.33
DDX41-206ENST00000506965 OGFOD1Q8N543 542 aa17.1■□□□□ 0.33
DDX41-206ENST00000506965 KAZALD1Q96I82 304 aa17.1■□□□□ 0.33
DDX41-206ENST00000506965 CLMNQ96JQ2 1002 aa17.1■□□□□ 0.33
DDX41-206ENST00000506965 ANKRD2Q9GZV1 360 aa17.1■□□□□ 0.33
DDX41-206ENST00000506965 IL1R1P14778 569 aa17.09■□□□□ 0.33
DDX41-206ENST00000506965 CAP1Q01518 475 aa17.09■□□□□ 0.33
DDX41-206ENST00000506965 NCBP3Q53F19 620 aaKnown RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms