RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 TNIP1Q15025 636 aa22.76■■□□□ 1.23
PDLIM7-216ENST00000506537 METTL24Q5JXM2 366 aa22.76■■□□□ 1.23
PDLIM7-216ENST00000506537 SIL1Q9H173 461 aa22.76■■□□□ 1.23
PDLIM7-216ENST00000506537 HACL1Q9UJ83 578 aa22.76■■□□□ 1.23
PDLIM7-216ENST00000506537 COG6Q9Y2V7 657 aa22.76■■□□□ 1.23
PDLIM7-216ENST00000506537 G3V3G9 751 aa22.75■■□□□ 1.23
PDLIM7-216ENST00000506537 POTEIP0CG38 1075 aa22.75■■□□□ 1.23
PDLIM7-216ENST00000506537 POTEJP0CG39 1038 aa22.75■■□□□ 1.23
PDLIM7-216ENST00000506537 DCAF8Q5TAQ9 597 aa22.75■■□□□ 1.23
PDLIM7-216ENST00000506537 C16orf71Q8IYS4 520 aaPredicted RBP22.75■■□□□ 1.23
PDLIM7-216ENST00000506537 COA1Q9GZY4 146 aa22.75■■□□□ 1.23
PDLIM7-216ENST00000506537 COPRSQ9NQ92 184 aa22.75■■□□□ 1.23
PDLIM7-216ENST00000506537 ADAMTSL1Q8N6G6 1762 aa22.75■■□□□ 1.23
PDLIM7-216ENST00000506537 CIAO1O76071 339 aa22.74■■□□□ 1.23
PDLIM7-216ENST00000506537 EPS15P42566 896 aa22.74■■□□□ 1.23
PDLIM7-216ENST00000506537 UBE4AQ14139 1066 aa22.74■■□□□ 1.23
PDLIM7-216ENST00000506537 PODNQ7Z5L7 613 aa22.74■■□□□ 1.23
PDLIM7-216ENST00000506537 RBM46Q8TBY0 533 aaKnown RBP22.74■■□□□ 1.23
PDLIM7-216ENST00000506537 ZBTB12Q9Y330 459 aaPredicted RBP22.74■■□□□ 1.23
PDLIM7-216ENST00000506537 SHTN1A0MZ66 631 aa22.73■■□□□ 1.23
PDLIM7-216ENST00000506537 PDE8BO95263 885 aa22.73■■□□□ 1.23
PDLIM7-216ENST00000506537 VIL1P09327 827 aaKnown RBP22.73■■□□□ 1.23
PDLIM7-216ENST00000506537 EPHX2P34913 555 aa22.73■■□□□ 1.23
PDLIM7-216ENST00000506537 GPRC5DQ9NZD1 345 aa22.73■■□□□ 1.23
PDLIM7-216ENST00000506537 FBXO3Q9UK99 471 aa22.73■■□□□ 1.23
PDLIM7-216ENST00000506537 HSPA6P17066 643 aa22.72■■□□□ 1.23
PDLIM7-216ENST00000506537 PDE3AQ14432 1141 aa22.72■■□□□ 1.23
PDLIM7-216ENST00000506537 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.72■■□□□ 1.23
PDLIM7-216ENST00000506537 ZNF609O15014 1411 aa22.72■■□□□ 1.23
PDLIM7-216ENST00000506537 LMOD1P29536 600 aaPredicted RBP22.71■■□□□ 1.23
PDLIM7-216ENST00000506537 POLA2Q14181 598 aa22.71■■□□□ 1.23
PDLIM7-216ENST00000506537 CD209Q9NNX6 404 aa22.71■■□□□ 1.23
PDLIM7-216ENST00000506537 USP17L3A6NCW0 530 aa22.7■■□□□ 1.22
PDLIM7-216ENST00000506537 USP17L4A6NCW7 530 aa22.7■■□□□ 1.22
PDLIM7-216ENST00000506537 FGFR2P21802 821 aa22.7■■□□□ 1.22
PDLIM7-216ENST00000506537 USP17L1Q7RTZ2 530 aa22.7■■□□□ 1.22
PDLIM7-216ENST00000506537 DDX19BQ9UMR2 479 aa22.7■■□□□ 1.22
PDLIM7-216ENST00000506537 IL1R1P14778 569 aa22.69■■□□□ 1.22
PDLIM7-216ENST00000506537 IL15P40933 162 aaPredicted RBP22.69■■□□□ 1.22
PDLIM7-216ENST00000506537 GYG1P46976 350 aa22.69■■□□□ 1.22
PDLIM7-216ENST00000506537 ATP8B2P98198 1209 aa22.69■■□□□ 1.22
PDLIM7-216ENST00000506537 PUM3Q15397 648 aaKnown RBP22.69■■□□□ 1.22
PDLIM7-216ENST00000506537 DACT2Q5SW24 774 aa22.69■■□□□ 1.22
PDLIM7-216ENST00000506537 CEP85Q6P2H3 762 aa22.69■■□□□ 1.22
PDLIM7-216ENST00000506537 RSBN1LQ6PCB5 846 aaPredicted RBP22.69■■□□□ 1.22
PDLIM7-216ENST00000506537 ZNF804AQ7Z570 1209 aa22.69■■□□□ 1.22
PDLIM7-216ENST00000506537 SSH3Q8TE77 659 aa22.69■■□□□ 1.22
PDLIM7-216ENST00000506537 MXD3Q9BW11 206 aa22.69■■□□□ 1.22
PDLIM7-216ENST00000506537 RPS12P25398 132 aaKnown RBP22.68■■□□□ 1.22
PDLIM7-216ENST00000506537 RRP1P56182 461 aaKnown RBP22.68■■□□□ 1.22
PDLIM7-216ENST00000506537 EAPPQ56P03 285 aaPredicted RBP22.68■■□□□ 1.22
PDLIM7-216ENST00000506537 MICALL2Q8IY33 904 aa22.68■■□□□ 1.22
PDLIM7-216ENST00000506537 DPF2Q92785 391 aa22.68■■□□□ 1.22
PDLIM7-216ENST00000506537 FAM84BQ96KN1 310 aaPredicted RBP22.68■■□□□ 1.22
PDLIM7-216ENST00000506537 GMLQ99445 158 aa22.68■■□□□ 1.22
PDLIM7-216ENST00000506537 ZBTB40Q9NUA8 1239 aa22.68■■□□□ 1.22
PDLIM7-216ENST00000506537 CNOT7Q9UIV1 285 aaKnown RBP22.68■■□□□ 1.22
PDLIM7-216ENST00000506537 STRIP1Q5VSL9 837 aa22.67■■□□□ 1.22
PDLIM7-216ENST00000506537 SMC1BQ8NDV3 1235 aa22.67■■□□□ 1.22
PDLIM7-216ENST00000506537 ADARB2Q9NS39 739 aaKnown RBP22.67■■□□□ 1.22
PDLIM7-216ENST00000506537 ARAP2Q8WZ64 1704 aa22.67■■□□□ 1.22
PDLIM7-216ENST00000506537 FBXO33Q7Z6M2 555 aa22.66■■□□□ 1.22
PDLIM7-216ENST00000506537 PNMA8AQ86V59 439 aaPredicted RBP22.66■■□□□ 1.22
PDLIM7-216ENST00000506537 LDHDQ86WU2 507 aa22.66■■□□□ 1.22
PDLIM7-216ENST00000506537 TRPM4Q8TD43 1214 aa22.66■■□□□ 1.22
PDLIM7-216ENST00000506537 FBXW7Q969H0 707 aa22.66■■□□□ 1.22
PDLIM7-216ENST00000506537 CEP126Q9P2H0 1117 aa22.66■■□□□ 1.22
PDLIM7-216ENST00000506537 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.66■■□□□ 1.22
PDLIM7-216ENST00000506537 HIBADHP31937 336 aaKnown RBP22.65■■□□□ 1.22
PDLIM7-216ENST00000506537 GTF2IP78347 998 aa22.65■■□□□ 1.22
PDLIM7-216ENST00000506537 FSTL1Q12841 308 aa22.65■■□□□ 1.22
PDLIM7-216ENST00000506537 TTLL5Q6EMB2 1281 aa22.65■■□□□ 1.22
PDLIM7-216ENST00000506537 CHADLQ6NUI6 762 aa22.65■■□□□ 1.22
PDLIM7-216ENST00000506537 AGBL3Q8NEM8 1001 aa22.65■■□□□ 1.22
PDLIM7-216ENST00000506537 EGFRP00533 1210 aa22.64■■□□□ 1.21
PDLIM7-216ENST00000506537 HIRAP54198 1017 aaPredicted RBP22.64■■□□□ 1.21
PDLIM7-216ENST00000506537 TFCP2Q12800 502 aa22.64■■□□□ 1.21
PDLIM7-216ENST00000506537 ATP2B3Q16720 1220 aa22.64■■□□□ 1.21
PDLIM7-216ENST00000506537 USP50Q70EL3 339 aaPredicted RBP22.64■■□□□ 1.21
PDLIM7-216ENST00000506537 TDRD7Q8NHU6 1098 aaKnown RBP22.64■■□□□ 1.21
PDLIM7-216ENST00000506537 LPIN2Q92539 896 aa22.64■■□□□ 1.21
PDLIM7-216ENST00000506537 IFIT1P09914 478 aaKnown RBP22.63■■□□□ 1.21
PDLIM7-216ENST00000506537 SLC5A1P13866 664 aa22.63■■□□□ 1.21
PDLIM7-216ENST00000506537 BCAMP50895 628 aa22.63■■□□□ 1.21
PDLIM7-216ENST00000506537 SAMD7Q7Z3H4 446 aa22.63■■□□□ 1.21
PDLIM7-216ENST00000506537 CERS5Q8N5B7 392 aa22.63■■□□□ 1.21
PDLIM7-216ENST00000506537 JAG2Q9Y219 1238 aa22.63■■□□□ 1.21
PDLIM7-216ENST00000506537 ZNF280AP59817 542 aaPredicted RBP22.62■■□□□ 1.21
PDLIM7-216ENST00000506537 H7C1D1 291 aa22.61■■□□□ 1.21
PDLIM7-216ENST00000506537 SASH1O94885 1247 aa22.61■■□□□ 1.21
PDLIM7-216ENST00000506537 TBC1D10BQ4KMP7 808 aaPredicted RBP22.61■■□□□ 1.21
PDLIM7-216ENST00000506537 SIRT2Q8IXJ6 389 aa22.61■■□□□ 1.21
PDLIM7-216ENST00000506537 IQSEC3Q9UPP2 1182 aaPredicted RBP22.61■■□□□ 1.21
PDLIM7-216ENST00000506537 CLEC11AQ9Y240 323 aa22.61■■□□□ 1.21
PDLIM7-216ENST00000506537 FAM205AQ6ZU69 1335 aa22.6■■□□□ 1.21
PDLIM7-216ENST00000506537 MYO3BQ8WXR4 1341 aa22.6■■□□□ 1.21
PDLIM7-216ENST00000506537 ADORA1P30542 326 aa22.6■■□□□ 1.21
PDLIM7-216ENST00000506537 G3BP1Q13283 466 aaKnown RBP eCLIP22.6■■□□□ 1.21
PDLIM7-216ENST00000506537 CAVIN4Q5BKX8 364 aa22.6■■□□□ 1.21
PDLIM7-216ENST00000506537 MAP1SQ66K74 1059 aaPredicted RBP22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms