RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 PBX4Q9BYU1 374 aa9.64□□□□□ -0.87
HERC4-213ENST00000506515 NAGPAQ9UK23 515 aa9.64□□□□□ -0.87
HERC4-213ENST00000506515 ADARB2-AS1A8MUL3 147 aa9.63□□□□□ -0.87
HERC4-213ENST00000506515 METTL12A8MUP2 240 aa9.63□□□□□ -0.87
HERC4-213ENST00000506515 KRT76Q01546 638 aa9.63□□□□□ -0.87
HERC4-213ENST00000506515 PERM1Q5SV97 790 aa9.63□□□□□ -0.87
HERC4-213ENST00000506515 ELMSAN1Q6PJG2 1045 aa9.63□□□□□ -0.87
HERC4-213ENST00000506515 DTHD1Q6ZMT9 781 aa9.63□□□□□ -0.87
HERC4-213ENST00000506515 ABCB6Q9NP58 842 aa9.63□□□□□ -0.87
HERC4-213ENST00000506515 AKAP2Q9Y2D5 859 aa9.63□□□□□ -0.87
HERC4-213ENST00000506515 ELOA3CA0A087WX78 387 aaPredicted RBP9.62□□□□□ -0.87
HERC4-213ENST00000506515 TMEM238LA0A1B0GVL6 79 aa9.62□□□□□ -0.87
HERC4-213ENST00000506515 ELOA3DA6NLF2 546 aaPredicted RBP9.62□□□□□ -0.87
HERC4-213ENST00000506515 PDE2AO00408 941 aaPredicted RBP9.62□□□□□ -0.87
HERC4-213ENST00000506515 GRIA4P48058 902 aa9.62□□□□□ -0.87
HERC4-213ENST00000506515 HDLBPQ00341 1268 aaKnown RBP9.62□□□□□ -0.87
HERC4-213ENST00000506515 SRSF11Q05519 484 aaKnown RBP9.62□□□□□ -0.87
HERC4-213ENST00000506515 ELOA3BQ3SY89 546 aa9.62□□□□□ -0.87
HERC4-213ENST00000506515 PRPF40BQ6NWY9 871 aaKnown RBP9.62□□□□□ -0.87
HERC4-213ENST00000506515 GOLGA6L1Q8N7Z2 621 aa9.62□□□□□ -0.87
HERC4-213ENST00000506515 TMEM102Q8N9M5 508 aaPredicted RBP9.62□□□□□ -0.87
HERC4-213ENST00000506515 ELOA3Q8NG57 546 aa9.62□□□□□ -0.87
HERC4-213ENST00000506515 NXPE3Q969Y0 559 aa9.62□□□□□ -0.87
HERC4-213ENST00000506515 PLD4Q96BZ4 506 aa9.62□□□□□ -0.87
HERC4-213ENST00000506515 SMG9Q9H0W8 520 aaKnown RBP9.62□□□□□ -0.87
HERC4-213ENST00000506515 SMNDC1O75940 238 aaKnown RBP eCLIP9.61□□□□□ -0.87
HERC4-213ENST00000506515 ALAS2P22557 587 aa9.61□□□□□ -0.87
HERC4-213ENST00000506515 ZNF76P36508 570 aa9.61□□□□□ -0.87
HERC4-213ENST00000506515 TAF1CQ15572 869 aaPredicted RBP9.61□□□□□ -0.87
HERC4-213ENST00000506515 SPRED3Q2MJR0 410 aa9.61□□□□□ -0.87
HERC4-213ENST00000506515 POP1Q99575 1024 aaKnown RBP9.61□□□□□ -0.87
HERC4-213ENST00000506515 GDF2Q9UK05 429 aaPredicted RBP9.61□□□□□ -0.87
HERC4-213ENST00000506515 TTF2Q9UNY4 1162 aaKnown RBP9.61□□□□□ -0.87
HERC4-213ENST00000506515 ADAMTS2O95450 1211 aa9.6□□□□□ -0.87
HERC4-213ENST00000506515 FANCCQ00597 558 aa9.6□□□□□ -0.87
HERC4-213ENST00000506515 PSAPL1Q6NUJ1 521 aa9.6□□□□□ -0.87
HERC4-213ENST00000506515 C3orf58Q8NDZ4 430 aa9.6□□□□□ -0.87
HERC4-213ENST00000506515 RNF34Q969K3 372 aa9.6□□□□□ -0.87
HERC4-213ENST00000506515 MDFIQ99750 246 aa9.6□□□□□ -0.87
HERC4-213ENST00000506515 BHLHE41Q9C0J9 482 aaPredicted RBP9.6□□□□□ -0.87
HERC4-213ENST00000506515 USP31Q70CQ4 1352 aa9.6□□□□□ -0.87
HERC4-213ENST00000506515 A0A096LPE4 126 aa9.59□□□□□ -0.87
HERC4-213ENST00000506515 A0A1W2PPZ6 126 aa9.59□□□□□ -0.87
HERC4-213ENST00000506515 SLCO4C1Q6ZQN7 724 aa9.59□□□□□ -0.87
HERC4-213ENST00000506515 NUDT8Q8WV74 236 aa9.59□□□□□ -0.87
HERC4-213ENST00000506515 ACDQ96AP0 544 aa9.59□□□□□ -0.87
HERC4-213ENST00000506515 LPIN3Q9BQK8 851 aa9.59□□□□□ -0.87
HERC4-213ENST00000506515 METTL5Q9NRN9 209 aaKnown RBP9.59□□□□□ -0.87
HERC4-213ENST00000506515 XRCC5P13010 732 aaKnown RBP9.58□□□□□ -0.88
HERC4-213ENST00000506515 ERCC5P28715 1186 aaPredicted RBP9.58□□□□□ -0.88
HERC4-213ENST00000506515 LACRTQ9GZZ8 138 aa9.58□□□□□ -0.88
HERC4-213ENST00000506515 TRIM33Q9UPN9 1127 aa9.58□□□□□ -0.88
HERC4-213ENST00000506515 FBXO24O75426 580 aa9.57□□□□□ -0.88
HERC4-213ENST00000506515 RGS9O75916 674 aaPredicted RBP9.57□□□□□ -0.88
HERC4-213ENST00000506515 EPXP11678 715 aa9.57□□□□□ -0.88
HERC4-213ENST00000506515 GDF6Q6KF10 455 aaPredicted RBP9.57□□□□□ -0.88
HERC4-213ENST00000506515 C1orf229Q6ZS94 237 aaPredicted RBP9.57□□□□□ -0.88
HERC4-213ENST00000506515 METTL16Q86W50 562 aaKnown RBP9.57□□□□□ -0.88
HERC4-213ENST00000506515 NT5DC4Q86YG4 428 aa9.57□□□□□ -0.88
HERC4-213ENST00000506515 MUC3BQ9H195 1237 aa9.57□□□□□ -0.88
HERC4-213ENST00000506515 FRRS1LQ9P0K9 344 aa9.57□□□□□ -0.88
HERC4-213ENST00000506515 ITPKAP23677 461 aa9.56□□□□□ -0.88
HERC4-213ENST00000506515 ST13P50502 369 aaKnown RBP9.56□□□□□ -0.88
HERC4-213ENST00000506515 ADAMTSL4Q6UY14 1074 aa9.56□□□□□ -0.88
HERC4-213ENST00000506515 TPTE2Q6XPS3 522 aa9.56□□□□□ -0.88
HERC4-213ENST00000506515 GALNT6Q8NCL4 622 aa9.56□□□□□ -0.88
HERC4-213ENST00000506515 PTPRAP18433 802 aa9.55□□□□□ -0.88
HERC4-213ENST00000506515 GMPRP36959 345 aa9.55□□□□□ -0.88
HERC4-213ENST00000506515 EDARADDQ8WWZ3 215 aa9.55□□□□□ -0.88
HERC4-213ENST00000506515 BSNDQ8WZ55 320 aa9.55□□□□□ -0.88
HERC4-213ENST00000506515 JPH1Q9HDC5 661 aaPredicted RBP9.55□□□□□ -0.88
HERC4-213ENST00000506515 GGT7Q9UJ14 662 aa9.55□□□□□ -0.88
HERC4-213ENST00000506515 STARD13Q9Y3M8 1113 aa9.55□□□□□ -0.88
HERC4-213ENST00000506515 FAM177BA6PVY3 158 aa9.54□□□□□ -0.88
HERC4-213ENST00000506515 CCDC85BQ15834 202 aaPredicted RBP9.54□□□□□ -0.88
HERC4-213ENST00000506515 LCE2CQ5TA81 110 aa9.54□□□□□ -0.88
HERC4-213ENST00000506515 HS2ST1Q7LGA3 356 aa9.54□□□□□ -0.88
HERC4-213ENST00000506515 ZNF576Q9H609 170 aa9.54□□□□□ -0.88
HERC4-213ENST00000506515 ZFYVE1Q9HBF4 777 aa9.54□□□□□ -0.88
HERC4-213ENST00000506515 SH2B1Q9NRF2 756 aaPredicted RBP9.54□□□□□ -0.88
HERC4-213ENST00000506515 PPM1HQ9ULR3 514 aa9.54□□□□□ -0.88
HERC4-213ENST00000506515 WFS1O76024 890 aa9.53□□□□□ -0.88
HERC4-213ENST00000506515 ALBP02768 609 aa9.53□□□□□ -0.88
HERC4-213ENST00000506515 ZNF157P51786 506 aaPredicted RBP9.53□□□□□ -0.88
HERC4-213ENST00000506515 PTPN12Q05209 780 aaKnown RBP9.53□□□□□ -0.88
HERC4-213ENST00000506515 CDC25BP30305 580 aa9.52□□□□□ -0.89
HERC4-213ENST00000506515 ZNF394Q53GI3 561 aa9.52□□□□□ -0.89
HERC4-213ENST00000506515 C8orf86Q6ZUL3 223 aa9.52□□□□□ -0.89
HERC4-213ENST00000506515 CHSY3Q70JA7 882 aa9.52□□□□□ -0.89
HERC4-213ENST00000506515 TTC9Q92623 222 aa9.52□□□□□ -0.89
HERC4-213ENST00000506515 ADAM19Q9H013 955 aa9.52□□□□□ -0.89
HERC4-213ENST00000506515 GPN3Q9UHW5 284 aaPredicted RBP9.52□□□□□ -0.89
HERC4-213ENST00000506515 M0R082 166 aa9.51□□□□□ -0.89
HERC4-213ENST00000506515 OIP5O43482 229 aa9.51□□□□□ -0.89
HERC4-213ENST00000506515 SLURP2P0DP57 97 aa9.51□□□□□ -0.89
HERC4-213ENST00000506515 BCRP11274 1271 aa9.51□□□□□ -0.89
HERC4-213ENST00000506515 AMPD1P23109 780 aa9.51□□□□□ -0.89
HERC4-213ENST00000506515 CDC27P30260 824 aa9.51□□□□□ -0.89
HERC4-213ENST00000506515 RAD51AP2Q09MP3 1159 aa9.51□□□□□ -0.89
HERC4-213ENST00000506515 FAAP100Q0VG06 881 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms