RNA–Protein interactions for RNA: ENST00000506401.6

ITGA3-207, Transcript of integrin subunit alpha 3, humanhuman

TSL 2

Gene ITGA3, Length 1,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-207ENST00000506401 CAVIN4Q5BKX8 364 aa21.6■■□□□ 1.05
ITGA3-207ENST00000506401 MASTLQ96GX5 879 aa21.6■■□□□ 1.05
ITGA3-207ENST00000506401 USP26Q9BXU7 913 aa21.6■■□□□ 1.05
ITGA3-207ENST00000506401 AKAP11Q9UKA4 1901 aa21.6■■□□□ 1.05
ITGA3-207ENST00000506401 SGSM2O43147 1006 aa21.59■■□□□ 1.05
ITGA3-207ENST00000506401 MCAMP43121 646 aa21.59■■□□□ 1.05
ITGA3-207ENST00000506401 ZAP70P43403 619 aa21.59■■□□□ 1.05
ITGA3-207ENST00000506401 BCAMP50895 628 aa21.59■■□□□ 1.05
ITGA3-207ENST00000506401 SCARF1Q14162 830 aa21.59■■□□□ 1.05
ITGA3-207ENST00000506401 LRRFIP1Q32MZ4 808 aaKnown RBP21.59■■□□□ 1.05
ITGA3-207ENST00000506401 GNL3LQ9NVN8 582 aaKnown RBP21.59■■□□□ 1.05
ITGA3-207ENST00000506401 LEMD3Q9Y2U8 911 aa21.59■■□□□ 1.05
ITGA3-207ENST00000506401 H0YIN7 160 aa21.59■■□□□ 1.05
ITGA3-207ENST00000506401 ZNF804BA4D1E1 1349 aa21.59■■□□□ 1.05
ITGA3-207ENST00000506401 XDHP47989 1333 aa21.59■■□□□ 1.05
ITGA3-207ENST00000506401 RBM25P49756 843 aaKnown RBP21.58■■□□□ 1.05
ITGA3-207ENST00000506401 TTF1Q15361 905 aaPredicted RBP21.58■■□□□ 1.05
ITGA3-207ENST00000506401 VPS37DQ86XT2 251 aa21.58■■□□□ 1.05
ITGA3-207ENST00000506401 C2CD5Q86YS7 1000 aa21.58■■□□□ 1.05
ITGA3-207ENST00000506401 PPEF1O14829 653 aaPredicted RBP21.57■■□□□ 1.04
ITGA3-207ENST00000506401 KIAA1211Q6ZU35 1233 aa21.57■■□□□ 1.04
ITGA3-207ENST00000506401 NMIQ13287 307 aaPredicted RBP21.57■■□□□ 1.04
ITGA3-207ENST00000506401 SP8Q8IXZ3 490 aa21.57■■□□□ 1.04
ITGA3-207ENST00000506401 ANO2Q9NQ90 1003 aa21.57■■□□□ 1.04
ITGA3-207ENST00000506401 WTIPA6NIX2 430 aaPredicted RBP21.56■■□□□ 1.04
ITGA3-207ENST00000506401 EPB41L2O43491 1005 aaKnown RBP21.56■■□□□ 1.04
ITGA3-207ENST00000506401 GYG1P46976 350 aa21.56■■□□□ 1.04
ITGA3-207ENST00000506401 SPATA5Q8NB90 893 aa21.56■■□□□ 1.04
ITGA3-207ENST00000506401 ZNF622Q969S3 477 aaKnown RBP eCLIP21.56■■□□□ 1.04
ITGA3-207ENST00000506401 FAM84BQ96KN1 310 aaPredicted RBP21.56■■□□□ 1.04
ITGA3-207ENST00000506401 ANTXR1Q9H6X2 564 aa21.56■■□□□ 1.04
ITGA3-207ENST00000506401 HMG20BQ9P0W2 317 aa21.56■■□□□ 1.04
ITGA3-207ENST00000506401 RAD50Q92878 1312 aa21.56■■□□□ 1.04
ITGA3-207ENST00000506401 COL11A2P13942 1736 aaPredicted RBP21.55■■□□□ 1.04
ITGA3-207ENST00000506401 ATP2B4P23634 1241 aa21.55■■□□□ 1.04
ITGA3-207ENST00000506401 GPSM2P81274 684 aa21.55■■□□□ 1.04
ITGA3-207ENST00000506401 STYK1Q6J9G0 422 aa21.55■■□□□ 1.04
ITGA3-207ENST00000506401 PI16Q6UXB8 463 aa21.55■■□□□ 1.04
ITGA3-207ENST00000506401 FAM227BQ96M60 508 aa21.55■■□□□ 1.04
ITGA3-207ENST00000506401 TMX4Q9H1E5 349 aaPredicted RBP21.55■■□□□ 1.04
ITGA3-207ENST00000506401 NSFL1CQ9UNZ2 370 aaKnown RBP21.55■■□□□ 1.04
ITGA3-207ENST00000506401 RASGRF1Q13972 1273 aa21.55■■□□□ 1.04
ITGA3-207ENST00000506401 FBXO33Q7Z6M2 555 aa21.55■■□□□ 1.04
ITGA3-207ENST00000506401 ATP6V0A2Q9Y487 856 aa21.55■■□□□ 1.04
ITGA3-207ENST00000506401 HIBADHP31937 336 aaKnown RBP21.54■■□□□ 1.04
ITGA3-207ENST00000506401 DDRGK1Q96HY6 314 aa21.54■■□□□ 1.04
ITGA3-207ENST00000506401 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.54■■□□□ 1.04
ITGA3-207ENST00000506401 IL25Q9H293 177 aa21.54■■□□□ 1.04
ITGA3-207ENST00000506401 PODXL2Q9NZ53 605 aa21.54■■□□□ 1.04
ITGA3-207ENST00000506401 GGA1Q9UJY5 639 aa21.54■■□□□ 1.04
ITGA3-207ENST00000506401 RNF113AO15541 343 aaKnown RBP21.53■■□□□ 1.04
ITGA3-207ENST00000506401 CYP2E1P05181 493 aaPredicted RBP21.53■■□□□ 1.04
ITGA3-207ENST00000506401 ZFYP08048 801 aaPredicted RBP21.53■■□□□ 1.04
ITGA3-207ENST00000506401 ZSCAN25Q6NSZ9 544 aa21.53■■□□□ 1.04
ITGA3-207ENST00000506401 MYH7P12883 1935 aa21.53■■□□□ 1.04
ITGA3-207ENST00000506401 A0A0D9SFI3 127 aa21.52■■□□□ 1.04
ITGA3-207ENST00000506401 MCCP23508 829 aa21.52■■□□□ 1.04
ITGA3-207ENST00000506401 R3HDM1Q15032 1099 aaKnown RBP21.52■■□□□ 1.04
ITGA3-207ENST00000506401 SEMA3EO15041 775 aa21.52■■□□□ 1.04
ITGA3-207ENST00000506401 ZBTB7AO95365 584 aa21.52■■□□□ 1.04
ITGA3-207ENST00000506401 MTFR1LQ9H019 292 aa21.52■■□□□ 1.04
ITGA3-207ENST00000506401 HELLSQ9NRZ9 838 aa21.52■■□□□ 1.04
ITGA3-207ENST00000506401 DENND2AQ9ULE3 1009 aa21.52■■□□□ 1.04
ITGA3-207ENST00000506401 LRRC37AA6NMS7 1700 aa21.52■■□□□ 1.04
ITGA3-207ENST00000506401 FRAT2O75474 233 aaPredicted RBP21.51■■□□□ 1.03
ITGA3-207ENST00000506401 UFL1O94874 794 aa21.51■■□□□ 1.03
ITGA3-207ENST00000506401 MCMDC2Q4G0Z9 681 aa21.51■■□□□ 1.03
ITGA3-207ENST00000506401 C15orf52Q6ZUT6 534 aaKnown RBP21.51■■□□□ 1.03
ITGA3-207ENST00000506401 CNKSR1Q969H4 720 aa21.51■■□□□ 1.03
ITGA3-207ENST00000506401 CACNA1SQ13698 1873 aa21.51■■□□□ 1.03
ITGA3-207ENST00000506401 KLRK1P26718 216 aa21.5■■□□□ 1.03
ITGA3-207ENST00000506401 POLD1P28340 1107 aa21.5■■□□□ 1.03
ITGA3-207ENST00000506401 LSG1Q9H089 658 aaKnown RBP21.5■■□□□ 1.03
ITGA3-207ENST00000506401 PIH1D3Q9NQM4 214 aaKnown RBP21.5■■□□□ 1.03
ITGA3-207ENST00000506401 C10orf71Q711Q0 1435 aa21.5■■□□□ 1.03
ITGA3-207ENST00000506401 CHRNA5P30532 468 aa21.5■■□□□ 1.03
ITGA3-207ENST00000506401 ZMYM1Q5SVZ6 1142 aa21.5■■□□□ 1.03
ITGA3-207ENST00000506401 ZNF804AQ7Z570 1209 aa21.5■■□□□ 1.03
ITGA3-207ENST00000506401 SLC51AQ86UW1 340 aa21.5■■□□□ 1.03
ITGA3-207ENST00000506401 IQSEC3Q9UPP2 1182 aaPredicted RBP21.5■■□□□ 1.03
ITGA3-207ENST00000506401 ATF5Q9Y2D1 282 aaPredicted RBP21.5■■□□□ 1.03
ITGA3-207ENST00000506401 IRS2Q9Y4H2 1338 aa21.49■■□□□ 1.03
ITGA3-207ENST00000506401 WASHC4Q2M389 1173 aa21.49■■□□□ 1.03
ITGA3-207ENST00000506401 IPO9Q96P70 1041 aaKnown RBP21.49■■□□□ 1.03
ITGA3-207ENST00000506401 MYH13Q9UKX3 1938 aa21.49■■□□□ 1.03
ITGA3-207ENST00000506401 MYO5AQ9Y4I1 1855 aaKnown RBP21.49■■□□□ 1.03
ITGA3-207ENST00000506401 ZBTB22O15209 634 aa21.48■■□□□ 1.03
ITGA3-207ENST00000506401 IDH1O75874 414 aaKnown RBP21.48■■□□□ 1.03
ITGA3-207ENST00000506401 MAP3K12Q12852 859 aa21.48■■□□□ 1.03
ITGA3-207ENST00000506401 TXNRD3Q86VQ6 643 aa21.48■■□□□ 1.03
ITGA3-207ENST00000506401 MPNDQ8N594 471 aa21.48■■□□□ 1.03
ITGA3-207ENST00000506401 TBC1D16Q8TBP0 767 aa21.48■■□□□ 1.03
ITGA3-207ENST00000506401 MED23Q9ULK4 1368 aa21.48■■□□□ 1.03
ITGA3-207ENST00000506401 C6orf229H3BNL8 230 aa21.48■■□□□ 1.03
ITGA3-207ENST00000506401 PDS5AQ29RF7 1337 aaKnown RBP21.47■■□□□ 1.03
ITGA3-207ENST00000506401 CCDC171Q6TFL3 1326 aa21.47■■□□□ 1.03
ITGA3-207ENST00000506401 CHGBP05060 677 aa21.47■■□□□ 1.03
ITGA3-207ENST00000506401 SLC9C2Q5TAH2 1124 aa21.47■■□□□ 1.03
ITGA3-207ENST00000506401 PRPF40BQ6NWY9 871 aaKnown RBP21.47■■□□□ 1.03
ITGA3-207ENST00000506401 POLLQ9UGP5 575 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms