RNA–Protein interactions for RNA: ENST00000506060.5

POLR2J3-211, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 3

Gene POLR2J3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-211ENST00000506060 VPS37DQ86XT2 251 aa14.5□□□□□ -0.09
POLR2J3-211ENST00000506060 SLC16A10Q8TF71 515 aa14.5□□□□□ -0.09
POLR2J3-211ENST00000506060 TMX4Q9H1E5 349 aaPredicted RBP14.5□□□□□ -0.09
POLR2J3-211ENST00000506060 ALDH1B1P30837 517 aa14.49□□□□□ -0.09
POLR2J3-211ENST00000506060 ANAPC15P60006 121 aa14.49□□□□□ -0.09
POLR2J3-211ENST00000506060 NMIQ13287 307 aaPredicted RBP14.49□□□□□ -0.09
POLR2J3-211ENST00000506060 ANO8Q9HCE9 1232 aaPredicted RBP14.49□□□□□ -0.09
POLR2J3-211ENST00000506060 HELLSQ9NRZ9 838 aa14.49□□□□□ -0.09
POLR2J3-211ENST00000506060 LEMD3Q9Y2U8 911 aa14.49□□□□□ -0.09
POLR2J3-211ENST00000506060 XDHP47989 1333 aa14.48□□□□□ -0.09
POLR2J3-211ENST00000506060 SEMA3EO15041 775 aa14.48□□□□□ -0.09
POLR2J3-211ENST00000506060 NPR1P16066 1061 aa14.48□□□□□ -0.09
POLR2J3-211ENST00000506060 PHKA1P46020 1223 aa14.48□□□□□ -0.09
POLR2J3-211ENST00000506060 RABEP1Q15276 862 aa14.48□□□□□ -0.09
POLR2J3-211ENST00000506060 DEFB132Q7Z7B7 95 aa14.48□□□□□ -0.09
POLR2J3-211ENST00000506060 SNRKQ9NRH2 765 aa14.48□□□□□ -0.09
POLR2J3-211ENST00000506060 ANKIB1Q9P2G1 1089 aa14.48□□□□□ -0.09
POLR2J3-211ENST00000506060 A0A1B0GUL6 1792 aa14.47□□□□□ -0.09
POLR2J3-211ENST00000506060 TAF1P21675 1872 aa14.47□□□□□ -0.09
POLR2J3-211ENST00000506060 RNF113AO15541 343 aaKnown RBP14.47□□□□□ -0.09
POLR2J3-211ENST00000506060 ZAP70P43403 619 aa14.47□□□□□ -0.09
POLR2J3-211ENST00000506060 MCMDC2Q4G0Z9 681 aa14.47□□□□□ -0.09
POLR2J3-211ENST00000506060 ILDR1Q86SU0 546 aaPredicted RBP14.47□□□□□ -0.09
POLR2J3-211ENST00000506060 ZNF804BA4D1E1 1349 aa14.46□□□□□ -0.09
POLR2J3-211ENST00000506060 ATP2B4P23634 1241 aa14.46□□□□□ -0.09
POLR2J3-211ENST00000506060 MCAMP43121 646 aa14.46□□□□□ -0.09
POLR2J3-211ENST00000506060 RNF20Q5VTR2 975 aa14.46□□□□□ -0.09
POLR2J3-211ENST00000506060 MSL1Q68DK7 614 aa14.46□□□□□ -0.09
POLR2J3-211ENST00000506060 HSCBQ8IWL3 235 aa14.46□□□□□ -0.09
POLR2J3-211ENST00000506060 SPATA5Q8NB90 893 aa14.46□□□□□ -0.09
POLR2J3-211ENST00000506060 EDC3Q96F86 508 aaKnown RBP14.46□□□□□ -0.09
POLR2J3-211ENST00000506060 DENND2AQ9ULE3 1009 aa14.46□□□□□ -0.09
POLR2J3-211ENST00000506060 CCDC171Q6TFL3 1326 aa14.45□□□□□ -0.1
POLR2J3-211ENST00000506060 MYH7P12883 1935 aa14.45□□□□□ -0.1
POLR2J3-211ENST00000506060 AKAP11Q9UKA4 1901 aa14.45□□□□□ -0.1
POLR2J3-211ENST00000506060 ZBTB22O15209 634 aa14.45□□□□□ -0.1
POLR2J3-211ENST00000506060 IGSF3O75054 1194 aa14.45□□□□□ -0.1
POLR2J3-211ENST00000506060 FRAT2O75474 233 aaPredicted RBP14.45□□□□□ -0.1
POLR2J3-211ENST00000506060 ZKSCAN1P17029 563 aaPredicted RBP14.45□□□□□ -0.1
POLR2J3-211ENST00000506060 MAP3K12Q12852 859 aa14.45□□□□□ -0.1
POLR2J3-211ENST00000506060 WASHC4Q2M389 1173 aa14.45□□□□□ -0.1
POLR2J3-211ENST00000506060 ERICH6Q7L0X2 663 aa14.45□□□□□ -0.1
POLR2J3-211ENST00000506060 MASTLQ96GX5 879 aa14.45□□□□□ -0.1
POLR2J3-211ENST00000506060 FAM227BQ96M60 508 aa14.45□□□□□ -0.1
POLR2J3-211ENST00000506060 LSG1Q9H089 658 aaKnown RBP14.45□□□□□ -0.1
POLR2J3-211ENST00000506060 PDS5AQ29RF7 1337 aaKnown RBP14.44□□□□□ -0.1
POLR2J3-211ENST00000506060 A0A0D9SFI3 127 aa14.44□□□□□ -0.1
POLR2J3-211ENST00000506060 H0YIN7 160 aa14.44□□□□□ -0.1
POLR2J3-211ENST00000506060 PPEF1O14829 653 aaPredicted RBP14.44□□□□□ -0.1
POLR2J3-211ENST00000506060 ST18O60284 1047 aa14.44□□□□□ -0.1
POLR2J3-211ENST00000506060 SRGNP10124 158 aa14.44□□□□□ -0.1
POLR2J3-211ENST00000506060 HIBADHP31937 336 aaKnown RBP14.44□□□□□ -0.1
POLR2J3-211ENST00000506060 BCAMP50895 628 aa14.44□□□□□ -0.1
POLR2J3-211ENST00000506060 SCARF1Q14162 830 aa14.44□□□□□ -0.1
POLR2J3-211ENST00000506060 ZMYM1Q5SVZ6 1142 aa14.44□□□□□ -0.1
POLR2J3-211ENST00000506060 TMED8Q6PL24 325 aaPredicted RBP14.44□□□□□ -0.1
POLR2J3-211ENST00000506060 ZNF804AQ7Z570 1209 aa14.44□□□□□ -0.1
POLR2J3-211ENST00000506060 SP8Q8IXZ3 490 aa14.44□□□□□ -0.1
POLR2J3-211ENST00000506060 SNX21Q969T3 373 aa14.44□□□□□ -0.1
POLR2J3-211ENST00000506060 HMG20BQ9P0W2 317 aa14.44□□□□□ -0.1
POLR2J3-211ENST00000506060 GGA1Q9UJY5 639 aa14.44□□□□□ -0.1
POLR2J3-211ENST00000506060 NDUFB9Q9Y6M9 179 aa14.44□□□□□ -0.1
POLR2J3-211ENST00000506060 MED23Q9ULK4 1368 aa14.44□□□□□ -0.1
POLR2J3-211ENST00000506060 ANKRD31Q8N7Z5 1873 aa14.44□□□□□ -0.1
POLR2J3-211ENST00000506060 HSPA4P34932 840 aa14.43□□□□□ -0.1
POLR2J3-211ENST00000506060 RASGRF1Q13972 1273 aa14.43□□□□□ -0.1
POLR2J3-211ENST00000506060 UBE3CQ15386 1083 aa14.43□□□□□ -0.1
POLR2J3-211ENST00000506060 STYK1Q6J9G0 422 aa14.43□□□□□ -0.1
POLR2J3-211ENST00000506060 C15orf52Q6ZUT6 534 aaKnown RBP14.43□□□□□ -0.1
POLR2J3-211ENST00000506060 FBXO33Q7Z6M2 555 aa14.43□□□□□ -0.1
POLR2J3-211ENST00000506060 APPBP2Q92624 585 aa14.43□□□□□ -0.1
POLR2J3-211ENST00000506060 PODXL2Q9NZ53 605 aa14.43□□□□□ -0.1
POLR2J3-211ENST00000506060 U3KPZ7 1027 aaPredicted RBP14.43□□□□□ -0.1
POLR2J3-211ENST00000506060 IDH1O75874 414 aaKnown RBP14.42□□□□□ -0.1
POLR2J3-211ENST00000506060 CYP2E1P05181 493 aaPredicted RBP14.42□□□□□ -0.1
POLR2J3-211ENST00000506060 GYG1P46976 350 aa14.42□□□□□ -0.1
POLR2J3-211ENST00000506060 C2CD5Q86YS7 1000 aa14.42□□□□□ -0.1
POLR2J3-211ENST00000506060 MAP4K1Q92918 833 aa14.42□□□□□ -0.1
POLR2J3-211ENST00000506060 CNKSR1Q969H4 720 aa14.42□□□□□ -0.1
POLR2J3-211ENST00000506060 FAM84BQ96KN1 310 aaPredicted RBP14.42□□□□□ -0.1
POLR2J3-211ENST00000506060 ANTXR1Q9H6X2 564 aa14.42□□□□□ -0.1
POLR2J3-211ENST00000506060 NSFL1CQ9UNZ2 370 aaKnown RBP14.42□□□□□ -0.1
POLR2J3-211ENST00000506060 ATP6V0A2Q9Y487 856 aa14.42□□□□□ -0.1
POLR2J3-211ENST00000506060 COL4A1P02462 1669 aa14.42□□□□□ -0.1
POLR2J3-211ENST00000506060 SNAP23O00161 211 aa14.41□□□□□ -0.1
POLR2J3-211ENST00000506060 MCM2P49736 904 aa14.41□□□□□ -0.1
POLR2J3-211ENST00000506060 SLC9C2Q5TAH2 1124 aa14.41□□□□□ -0.1
POLR2J3-211ENST00000506060 SPTY2D1Q68D10 685 aaPredicted RBP14.41□□□□□ -0.1
POLR2J3-211ENST00000506060 ZGPATQ8N5A5 531 aaKnown RBP14.41□□□□□ -0.1
POLR2J3-211ENST00000506060 IL17RAQ96F46 866 aa14.41□□□□□ -0.1
POLR2J3-211ENST00000506060 DSCC1Q9BVC3 393 aa14.41□□□□□ -0.1
POLR2J3-211ENST00000506060 LRP2BPQ9P2M1 347 aa14.41□□□□□ -0.1
POLR2J3-211ENST00000506060 MYH13Q9UKX3 1938 aa14.41□□□□□ -0.1
POLR2J3-211ENST00000506060 UFL1O94874 794 aa14.4□□□□□ -0.1
POLR2J3-211ENST00000506060 PSMA5P28066 241 aa14.4□□□□□ -0.1
POLR2J3-211ENST00000506060 ADD2P35612 726 aa14.4□□□□□ -0.1
POLR2J3-211ENST00000506060 GPSM2P81274 684 aa14.4□□□□□ -0.1
POLR2J3-211ENST00000506060 KRT32Q14532 448 aa14.4□□□□□ -0.1
POLR2J3-211ENST00000506060 PI16Q6UXB8 463 aa14.4□□□□□ -0.1
POLR2J3-211ENST00000506060 ZNF622Q969S3 477 aaKnown RBP eCLIP14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms