RNA–Protein interactions for RNA: ENST00000506023.1

BRIX1-202, Transcript of BRX1, biogenesis of ribosomes, humanhuman

TSL 3

Gene BRIX1, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIX1-202ENST00000506023 APAF1O14727 1248 aa13.41□□□□□ -0.26
BRIX1-202ENST00000506023 PDE8AO60658 829 aa13.41□□□□□ -0.26
BRIX1-202ENST00000506023 CCDC191Q8NCU4 936 aa13.41□□□□□ -0.26
BRIX1-202ENST00000506023 METTL22Q9BUU2 404 aaPredicted RBP13.41□□□□□ -0.26
BRIX1-202ENST00000506023 R3HDMLQ9H3Y0 253 aa13.41□□□□□ -0.26
BRIX1-202ENST00000506023 GREM2Q9H772 168 aa13.41□□□□□ -0.26
BRIX1-202ENST00000506023 FZD1Q9UP38 647 aa13.41□□□□□ -0.26
BRIX1-202ENST00000506023 SSC5DA1L4H1 1573 aa13.41□□□□□ -0.26
BRIX1-202ENST00000506023 USP17L8P0C7I0 530 aa13.4□□□□□ -0.26
BRIX1-202ENST00000506023 GOLGA2Q08379 1002 aa13.4□□□□□ -0.26
BRIX1-202ENST00000506023 CCDC152Q4G0S7 254 aa13.4□□□□□ -0.26
BRIX1-202ENST00000506023 DACT2Q5SW24 774 aa13.4□□□□□ -0.26
BRIX1-202ENST00000506023 TTLL11Q8NHH1 800 aa13.4□□□□□ -0.26
BRIX1-202ENST00000506023 IFT57Q9NWB7 429 aa13.4□□□□□ -0.26
BRIX1-202ENST00000506023 CWC25Q9NXE8 425 aaPredicted RBP13.4□□□□□ -0.26
BRIX1-202ENST00000506023 MED23Q9ULK4 1368 aa13.4□□□□□ -0.26
BRIX1-202ENST00000506023 PITPNM2Q9BZ72 1349 aa13.39□□□□□ -0.27
BRIX1-202ENST00000506023 TBC1D8O95759 1140 aa13.39□□□□□ -0.27
BRIX1-202ENST00000506023 CTSWP56202 376 aa13.39□□□□□ -0.27
BRIX1-202ENST00000506023 WDR43Q15061 677 aaKnown RBP eCLIP13.39□□□□□ -0.27
BRIX1-202ENST00000506023 CWF19L2Q2TBE0 894 aaKnown RBP13.39□□□□□ -0.27
BRIX1-202ENST00000506023 G2E3Q7L622 706 aa13.39□□□□□ -0.27
BRIX1-202ENST00000506023 CTU1Q7Z7A3 348 aaKnown RBP13.39□□□□□ -0.27
BRIX1-202ENST00000506023 MINPP1Q9UNW1 487 aa13.39□□□□□ -0.27
BRIX1-202ENST00000506023 HPS5Q9UPZ3 1129 aa13.39□□□□□ -0.27
BRIX1-202ENST00000506023 MAP3K2Q9Y2U5 619 aa13.39□□□□□ -0.27
BRIX1-202ENST00000506023 AOX1Q06278 1338 aa13.39□□□□□ -0.27
BRIX1-202ENST00000506023 USP17L3A6NCW0 530 aa13.38□□□□□ -0.27
BRIX1-202ENST00000506023 USP17L4A6NCW7 530 aa13.38□□□□□ -0.27
BRIX1-202ENST00000506023 WNT10BO00744 389 aa13.38□□□□□ -0.27
BRIX1-202ENST00000506023 SASH1O94885 1247 aa13.38□□□□□ -0.27
BRIX1-202ENST00000506023 MKRN3Q13064 507 aaKnown RBP13.38□□□□□ -0.27
BRIX1-202ENST00000506023 CCDC184Q52MB2 194 aa13.38□□□□□ -0.27
BRIX1-202ENST00000506023 POTEHQ6S545 545 aa13.38□□□□□ -0.27
BRIX1-202ENST00000506023 USP17L1Q7RTZ2 530 aa13.38□□□□□ -0.27
BRIX1-202ENST00000506023 ANKRD18AQ8IVF6 992 aa13.38□□□□□ -0.27
BRIX1-202ENST00000506023 ZNF296Q8WUU4 475 aaPredicted RBP13.38□□□□□ -0.27
BRIX1-202ENST00000506023 PCDHAC2Q9Y5I4 1007 aa13.38□□□□□ -0.27
BRIX1-202ENST00000506023 CACNA1FO60840 1977 aa13.38□□□□□ -0.27
BRIX1-202ENST00000506023 IRS2Q9Y4H2 1338 aa13.38□□□□□ -0.27
BRIX1-202ENST00000506023 RBBP6Q7Z6E9 1792 aaKnown RBP13.37□□□□□ -0.27
BRIX1-202ENST00000506023 SNAP23O00161 211 aa13.37□□□□□ -0.27
BRIX1-202ENST00000506023 ATP2B4P23634 1241 aa13.37□□□□□ -0.27
BRIX1-202ENST00000506023 PODNQ7Z5L7 613 aa13.37□□□□□ -0.27
BRIX1-202ENST00000506023 TSR2Q969E8 191 aaKnown RBP13.37□□□□□ -0.27
BRIX1-202ENST00000506023 ZBED3Q96IU2 234 aaPredicted RBP13.37□□□□□ -0.27
BRIX1-202ENST00000506023 PRKRIP1Q9H875 184 aaPredicted RBP13.37□□□□□ -0.27
BRIX1-202ENST00000506023 PI4KAP2A4QPH2 592 aa13.36□□□□□ -0.27
BRIX1-202ENST00000506023 CCT4P50991 539 aaKnown RBP13.36□□□□□ -0.27
BRIX1-202ENST00000506023 CASP7P55210 303 aa13.36□□□□□ -0.27
BRIX1-202ENST00000506023 FKBP1BP68106 108 aa13.36□□□□□ -0.27
BRIX1-202ENST00000506023 PI4KAP1Q8N8J0 262 aa13.36□□□□□ -0.27
BRIX1-202ENST00000506023 ZSWIM8A7E2V4 1837 aa13.36□□□□□ -0.27
BRIX1-202ENST00000506023 ARAP2Q8WZ64 1704 aa13.36□□□□□ -0.27
BRIX1-202ENST00000506023 NEURL1BA8MQ27 555 aa13.35□□□□□ -0.27
BRIX1-202ENST00000506023 G3V3G9 751 aa13.35□□□□□ -0.27
BRIX1-202ENST00000506023 GNAI1P63096 354 aa13.35□□□□□ -0.27
BRIX1-202ENST00000506023 PTPN12Q05209 780 aaKnown RBP13.35□□□□□ -0.27
BRIX1-202ENST00000506023 DCAF8Q5TAQ9 597 aa13.35□□□□□ -0.27
BRIX1-202ENST00000506023 KSR2Q6VAB6 950 aa13.35□□□□□ -0.27
BRIX1-202ENST00000506023 BSDC1Q9NW68 430 aaPredicted RBP13.35□□□□□ -0.27
BRIX1-202ENST00000506023 H7C1W4 665 aa13.34□□□□□ -0.27
BRIX1-202ENST00000506023 TM4SF4P48230 202 aa13.34□□□□□ -0.27
BRIX1-202ENST00000506023 CAP1Q01518 475 aa13.34□□□□□ -0.27
BRIX1-202ENST00000506023 PRKG1Q13976 671 aa13.34□□□□□ -0.27
BRIX1-202ENST00000506023 CERS5Q8N5B7 392 aa13.34□□□□□ -0.27
BRIX1-202ENST00000506023 GPR25O00155 361 aa13.33□□□□□ -0.28
BRIX1-202ENST00000506023 UBE3BQ7Z3V4 1068 aa13.33□□□□□ -0.28
BRIX1-202ENST00000506023 KIAA0825Q8IV33 1275 aa13.33□□□□□ -0.28
BRIX1-202ENST00000506023 FBXW7Q969H0 707 aa13.33□□□□□ -0.28
BRIX1-202ENST00000506023 LDLRAD1Q5T700 205 aa13.32□□□□□ -0.28
BRIX1-202ENST00000506023 STRIP1Q5VSL9 837 aa13.32□□□□□ -0.28
BRIX1-202ENST00000506023 CCDC30Q5VVM6 783 aa13.32□□□□□ -0.28
BRIX1-202ENST00000506023 CDC5LQ99459 802 aaKnown RBP13.32□□□□□ -0.28
BRIX1-202ENST00000506023 KIAA0100Q14667 2235 aaKnown RBP13.32□□□□□ -0.28
BRIX1-202ENST00000506023 ABCB7O75027 752 aa13.31□□□□□ -0.28
BRIX1-202ENST00000506023 GTF2IP78347 998 aa13.31□□□□□ -0.28
BRIX1-202ENST00000506023 TTLL12Q14166 644 aaPredicted RBP13.31□□□□□ -0.28
BRIX1-202ENST00000506023 CLMNQ96JQ2 1002 aa13.31□□□□□ -0.28
BRIX1-202ENST00000506023 COA1Q9GZY4 146 aa13.31□□□□□ -0.28
BRIX1-202ENST00000506023 ZNF804BA4D1E1 1349 aa13.31□□□□□ -0.28
BRIX1-202ENST00000506023 DDX58O95786 925 aaKnown RBP13.3□□□□□ -0.28
BRIX1-202ENST00000506023 CSF1RP07333 972 aa13.3□□□□□ -0.28
BRIX1-202ENST00000506023 ITGA6P23229 1130 aa13.3□□□□□ -0.28
BRIX1-202ENST00000506023 GJA5P36382 358 aa13.3□□□□□ -0.28
BRIX1-202ENST00000506023 GCKRQ14397 625 aa13.3□□□□□ -0.28
BRIX1-202ENST00000506023 PRPF38BQ5VTL8 546 aaKnown RBP13.3□□□□□ -0.28
BRIX1-202ENST00000506023 SPRYD7Q5W111 196 aa13.3□□□□□ -0.28
BRIX1-202ENST00000506023 TTLL5Q6EMB2 1281 aa13.3□□□□□ -0.28
BRIX1-202ENST00000506023 REM2Q8IYK8 340 aaPredicted RBP13.3□□□□□ -0.28
BRIX1-202ENST00000506023 PLA2G12BQ9BX93 195 aa13.3□□□□□ -0.28
BRIX1-202ENST00000506023 CFHR5Q9BXR6 569 aa13.3□□□□□ -0.28
BRIX1-202ENST00000506023 IGF2BP3O00425 579 aaKnown RBP eCLIP13.29□□□□□ -0.28
BRIX1-202ENST00000506023 TAF5LO75529 589 aa13.29□□□□□ -0.28
BRIX1-202ENST00000506023 HSP90B1P14625 803 aaKnown RBP13.29□□□□□ -0.28
BRIX1-202ENST00000506023 CHRNDQ07001 517 aa13.29□□□□□ -0.28
BRIX1-202ENST00000506023 NOM1Q5C9Z4 860 aaKnown RBP13.29□□□□□ -0.28
BRIX1-202ENST00000506023 CDAN1Q8IWY9 1227 aa13.29□□□□□ -0.28
BRIX1-202ENST00000506023 HELBQ8NG08 1087 aaPredicted RBP13.29□□□□□ -0.28
BRIX1-202ENST00000506023 CD209Q9NNX6 404 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms