RNA–Protein interactions for RNA: ENST00000505998.5

NIPBL-205, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 969 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-205ENST00000505998 A0A1W2PP55 124 aa9.8□□□□□ -0.84
NIPBL-205ENST00000505998 IRS1P35568 1242 aa9.8□□□□□ -0.84
NIPBL-205ENST00000505998 AFF1P51825 1210 aaKnown RBP9.8□□□□□ -0.84
NIPBL-205ENST00000505998 GDF6Q6KF10 455 aaPredicted RBP9.8□□□□□ -0.84
NIPBL-205ENST00000505998 SETDB2Q96T68 719 aa9.8□□□□□ -0.84
NIPBL-205ENST00000505998 TRIM33Q9UPN9 1127 aa9.8□□□□□ -0.84
NIPBL-205ENST00000505998 NFKBIEO00221 500 aa9.79□□□□□ -0.84
NIPBL-205ENST00000505998 PDE2AO00408 941 aaPredicted RBP9.79□□□□□ -0.84
NIPBL-205ENST00000505998 KIAA0319Q5VV43 1072 aa9.79□□□□□ -0.84
NIPBL-205ENST00000505998 TMEM102Q8N9M5 508 aaPredicted RBP9.79□□□□□ -0.84
NIPBL-205ENST00000505998 BCL2L13Q9BXK5 485 aa9.79□□□□□ -0.84
NIPBL-205ENST00000505998 EHD4Q9H223 541 aa9.79□□□□□ -0.84
NIPBL-205ENST00000505998 FAM177BA6PVY3 158 aa9.78□□□□□ -0.84
NIPBL-205ENST00000505998 PIK3R2O00459 728 aa9.78□□□□□ -0.84
NIPBL-205ENST00000505998 PRPF40AO75400 957 aaKnown RBP9.78□□□□□ -0.84
NIPBL-205ENST00000505998 GRIK5Q16478 980 aa9.78□□□□□ -0.84
NIPBL-205ENST00000505998 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.78□□□□□ -0.84
NIPBL-205ENST00000505998 BEND7Q8N7W2 519 aaPredicted RBP9.78□□□□□ -0.84
NIPBL-205ENST00000505998 HHIPQ96QV1 700 aa9.78□□□□□ -0.84
NIPBL-205ENST00000505998 POP1Q99575 1024 aaKnown RBP9.78□□□□□ -0.84
NIPBL-205ENST00000505998 LACRTQ9GZZ8 138 aa9.78□□□□□ -0.84
NIPBL-205ENST00000505998 LIN7BQ9HAP6 207 aa9.78□□□□□ -0.84
NIPBL-205ENST00000505998 STK17AQ9UEE5 414 aa9.78□□□□□ -0.84
NIPBL-205ENST00000505998 PTPRAP18433 802 aa9.77□□□□□ -0.85
NIPBL-205ENST00000505998 PI16Q6UXB8 463 aa9.77□□□□□ -0.85
NIPBL-205ENST00000505998 FBXO33Q7Z6M2 555 aa9.77□□□□□ -0.85
NIPBL-205ENST00000505998 CACTIN-AS1Q8N1I8 211 aa9.77□□□□□ -0.85
NIPBL-205ENST00000505998 NXPE3Q969Y0 559 aa9.77□□□□□ -0.85
NIPBL-205ENST00000505998 SCARF2Q96GP6 870 aaPredicted RBP9.77□□□□□ -0.85
NIPBL-205ENST00000505998 SUV39H2Q9H5I1 410 aa9.77□□□□□ -0.85
NIPBL-205ENST00000505998 CNTNAP5Q8WYK1 1306 aa9.77□□□□□ -0.85
NIPBL-205ENST00000505998 GNB5O14775 395 aa9.76□□□□□ -0.85
NIPBL-205ENST00000505998 NID1P14543 1247 aa9.76□□□□□ -0.85
NIPBL-205ENST00000505998 LINC00114Q6XXX2 140 aa9.76□□□□□ -0.85
NIPBL-205ENST00000505998 WFDC8Q8IUA0 241 aa9.76□□□□□ -0.85
NIPBL-205ENST00000505998 ASAP3Q8TDY4 903 aa9.76□□□□□ -0.85
NIPBL-205ENST00000505998 TRAK1Q9UPV9 953 aa9.76□□□□□ -0.85
NIPBL-205ENST00000505998 CDC27P30260 824 aa9.75□□□□□ -0.85
NIPBL-205ENST00000505998 COL9A3Q14050 684 aaPredicted RBP9.75□□□□□ -0.85
NIPBL-205ENST00000505998 MSL1Q68DK7 614 aa9.75□□□□□ -0.85
NIPBL-205ENST00000505998 IL22RA1Q8N6P7 574 aa9.75□□□□□ -0.85
NIPBL-205ENST00000505998 GIPC2Q8TF65 315 aa9.75□□□□□ -0.85
NIPBL-205ENST00000505998 DUSP9Q99956 384 aaKnown RBP9.75□□□□□ -0.85
NIPBL-205ENST00000505998 BHLHE41Q9C0J9 482 aaPredicted RBP9.75□□□□□ -0.85
NIPBL-205ENST00000505998 SPG7Q9UQ90 795 aa9.75□□□□□ -0.85
NIPBL-205ENST00000505998 GRM2Q14416 872 aa9.74□□□□□ -0.85
NIPBL-205ENST00000505998 ZNF326Q5BKZ1 582 aaKnown RBP9.74□□□□□ -0.85
NIPBL-205ENST00000505998 TRAPPC3LQ5T215 181 aa9.74□□□□□ -0.85
NIPBL-205ENST00000505998 CCNJLQ8IV13 435 aa9.74□□□□□ -0.85
NIPBL-205ENST00000505998 DMRTC2Q8IXT2 367 aaPredicted RBP9.74□□□□□ -0.85
NIPBL-205ENST00000505998 RGS22Q8NE09 1264 aa9.74□□□□□ -0.85
NIPBL-205ENST00000505998 TCF12Q99081 682 aa9.74□□□□□ -0.85
NIPBL-205ENST00000505998 BCO2Q9BYV7 579 aa9.74□□□□□ -0.85
NIPBL-205ENST00000505998 PPP4R2Q9NY27 417 aa9.74□□□□□ -0.85
NIPBL-205ENST00000505998 SPDYE3A6NKU9 549 aa9.73□□□□□ -0.85
NIPBL-205ENST00000505998 XPCQ01831 940 aaPredicted RBP9.73□□□□□ -0.85
NIPBL-205ENST00000505998 TRIM11Q96F44 468 aa9.73□□□□□ -0.85
NIPBL-205ENST00000505998 FRMD6Q96NE9 622 aa9.73□□□□□ -0.85
NIPBL-205ENST00000505998 PLVAPQ9BX97 442 aa9.73□□□□□ -0.85
NIPBL-205ENST00000505998 ADAM19Q9H013 955 aa9.73□□□□□ -0.85
NIPBL-205ENST00000505998 METTL12A8MUP2 240 aa9.72□□□□□ -0.85
NIPBL-205ENST00000505998 GIPC1O14908 333 aa9.72□□□□□ -0.85
NIPBL-205ENST00000505998 GNA15P30679 374 aa9.72□□□□□ -0.85
NIPBL-205ENST00000505998 BAG6P46379 1132 aa9.72□□□□□ -0.85
NIPBL-205ENST00000505998 CABP4P57796 275 aa9.72□□□□□ -0.85
NIPBL-205ENST00000505998 TAGLNQ01995 201 aaKnown RBP9.72□□□□□ -0.85
NIPBL-205ENST00000505998 PRPF40BQ6NWY9 871 aaKnown RBP9.72□□□□□ -0.85
NIPBL-205ENST00000505998 ADAMTSL4Q6UY14 1074 aa9.72□□□□□ -0.85
NIPBL-205ENST00000505998 BSNDQ8WZ55 320 aa9.72□□□□□ -0.85
NIPBL-205ENST00000505998 MUC3BQ9H195 1237 aa9.72□□□□□ -0.85
NIPBL-205ENST00000505998 SH2B1Q9NRF2 756 aaPredicted RBP9.72□□□□□ -0.85
NIPBL-205ENST00000505998 NOP53Q9NZM5 478 aaKnown RBP9.72□□□□□ -0.85
NIPBL-205ENST00000505998 PPME1Q9Y570 386 aa9.72□□□□□ -0.85
NIPBL-205ENST00000505998 A0A096LPE4 126 aa9.71□□□□□ -0.86
NIPBL-205ENST00000505998 A0A1W2PPZ6 126 aa9.71□□□□□ -0.86
NIPBL-205ENST00000505998 GRIA4P48058 902 aa9.71□□□□□ -0.86
NIPBL-205ENST00000505998 NXPE4Q6UWF7 544 aa9.71□□□□□ -0.86
NIPBL-205ENST00000505998 PARP2Q9UGN5 583 aa9.71□□□□□ -0.86
NIPBL-205ENST00000505998 TMEM238LA0A1B0GVL6 79 aa9.7□□□□□ -0.86
NIPBL-205ENST00000505998 CDC25BP30305 580 aa9.7□□□□□ -0.86
NIPBL-205ENST00000505998 SPRED3Q2MJR0 410 aa9.7□□□□□ -0.86
NIPBL-205ENST00000505998 GLIS3Q8NEA6 775 aa9.7□□□□□ -0.86
NIPBL-205ENST00000505998 SRCIN1Q9C0H9 1055 aa9.7□□□□□ -0.86
NIPBL-205ENST00000505998 ABCB6Q9NP58 842 aa9.7□□□□□ -0.86
NIPBL-205ENST00000505998 SOX13Q9UN79 622 aa9.7□□□□□ -0.86
NIPBL-205ENST00000505998 EPHA1P21709 976 aa9.69□□□□□ -0.86
NIPBL-205ENST00000505998 FCGRTP55899 365 aa9.69□□□□□ -0.86
NIPBL-205ENST00000505998 RAC1P63000 192 aa9.69□□□□□ -0.86
NIPBL-205ENST00000505998 PSMD2Q13200 908 aa9.69□□□□□ -0.86
NIPBL-205ENST00000505998 FAM117BQ6P1L5 589 aa9.69□□□□□ -0.86
NIPBL-205ENST00000505998 FOXD4L4Q8WXT5 416 aaPredicted RBP9.69□□□□□ -0.86
NIPBL-205ENST00000505998 OSBPL7Q9BZF2 842 aa9.69□□□□□ -0.86
NIPBL-205ENST00000505998 BCL11AQ9H165 835 aa9.69□□□□□ -0.86
NIPBL-205ENST00000505998 C12orf49Q9H741 205 aa9.69□□□□□ -0.86
NIPBL-205ENST00000505998 RNF19AQ9NV58 838 aa9.69□□□□□ -0.86
NIPBL-205ENST00000505998 LINC01387J3KSC0 135 aa9.68□□□□□ -0.86
NIPBL-205ENST00000505998 RNF225M0QZC1 329 aaPredicted RBP9.68□□□□□ -0.86
NIPBL-205ENST00000505998 ZNF16P17020 682 aaPredicted RBP9.68□□□□□ -0.86
NIPBL-205ENST00000505998 TRIM28Q13263 835 aaKnown RBP9.68□□□□□ -0.86
NIPBL-205ENST00000505998 TXNDC11Q6PKC3 985 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms