RNA–Protein interactions for RNA: ENST00000505307.5

UBE2D3-220, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5

Gene UBE2D3, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-220ENST00000505307 MMP14P50281 582 aa25.39■■□□□ 1.66
UBE2D3-220ENST00000505307 HUNKP57058 714 aa25.39■■□□□ 1.66
UBE2D3-220ENST00000505307 FAM161AQ3B820 660 aa25.39■■□□□ 1.66
UBE2D3-220ENST00000505307 GBA2Q9HCG7 927 aaPredicted RBP25.39■■□□□ 1.66
UBE2D3-220ENST00000505307 SPINK5Q9NQ38 1064 aaPredicted RBP25.39■■□□□ 1.66
UBE2D3-220ENST00000505307 GGA3Q9NZ52 723 aa25.39■■□□□ 1.66
UBE2D3-220ENST00000505307 PSME4Q14997 1843 aa25.38■■□□□ 1.65
UBE2D3-220ENST00000505307 AOC2O75106 756 aa25.38■■□□□ 1.65
UBE2D3-220ENST00000505307 NOGQ13253 232 aa25.38■■□□□ 1.65
UBE2D3-220ENST00000505307 BEND3Q5T5X7 828 aa25.38■■□□□ 1.65
UBE2D3-220ENST00000505307 MYO3BQ8WXR4 1341 aa25.37■■□□□ 1.65
UBE2D3-220ENST00000505307 ANKRD18BA2A2Z9 1011 aa25.37■■□□□ 1.65
UBE2D3-220ENST00000505307 BRPF1P55201 1214 aaPredicted RBP25.37■■□□□ 1.65
UBE2D3-220ENST00000505307 SCARF1Q14162 830 aa25.37■■□□□ 1.65
UBE2D3-220ENST00000505307 STRIP1Q5VSL9 837 aa25.37■■□□□ 1.65
UBE2D3-220ENST00000505307 MYOZ2Q9NPC6 264 aa25.37■■□□□ 1.65
UBE2D3-220ENST00000505307 ZNF804BA4D1E1 1349 aa25.37■■□□□ 1.65
UBE2D3-220ENST00000505307 ADM5C9JUS6 153 aa25.36■■□□□ 1.65
UBE2D3-220ENST00000505307 PITPNM2Q9BZ72 1349 aa25.36■■□□□ 1.65
UBE2D3-220ENST00000505307 WTIPA6NIX2 430 aaPredicted RBP25.35■■□□□ 1.65
UBE2D3-220ENST00000505307 F6X3S4 739 aa25.35■■□□□ 1.65
UBE2D3-220ENST00000505307 IFIT5Q13325 482 aaKnown RBP25.35■■□□□ 1.65
UBE2D3-220ENST00000505307 OGFOD1Q8N543 542 aa25.35■■□□□ 1.65
UBE2D3-220ENST00000505307 POLR2AP24928 1970 aaKnown RBP25.35■■□□□ 1.65
UBE2D3-220ENST00000505307 KCNJ4P48050 445 aa25.34■■□□□ 1.65
UBE2D3-220ENST00000505307 DACT2Q5SW24 774 aa25.34■■□□□ 1.65
UBE2D3-220ENST00000505307 ANGEL2Q5VTE6 544 aaKnown RBP25.34■■□□□ 1.65
UBE2D3-220ENST00000505307 RGMBQ6NW40 437 aa25.34■■□□□ 1.65
UBE2D3-220ENST00000505307 DLK2Q6UY11 383 aa25.34■■□□□ 1.65
UBE2D3-220ENST00000505307 CCDC102AQ96A19 550 aa25.34■■□□□ 1.65
UBE2D3-220ENST00000505307 SPEF2Q9C093 1822 aa25.33■■□□□ 1.65
UBE2D3-220ENST00000505307 ALDH1L1O75891 902 aa25.33■■□□□ 1.65
UBE2D3-220ENST00000505307 FOXO4P98177 505 aa25.33■■□□□ 1.65
UBE2D3-220ENST00000505307 CHRNDQ07001 517 aa25.33■■□□□ 1.65
UBE2D3-220ENST00000505307 GRM8O00222 908 aa25.32■■□□□ 1.64
UBE2D3-220ENST00000505307 TXNRD3Q86VQ6 643 aa25.32■■□□□ 1.64
UBE2D3-220ENST00000505307 ASTN2O75129 1339 aaPredicted RBP25.32■■□□□ 1.64
UBE2D3-220ENST00000505307 FKBP1BP68106 108 aa25.31■■□□□ 1.64
UBE2D3-220ENST00000505307 TTLL5Q6EMB2 1281 aa25.31■■□□□ 1.64
UBE2D3-220ENST00000505307 CDCA5Q96FF9 252 aa25.31■■□□□ 1.64
UBE2D3-220ENST00000505307 C9orf78Q9NZ63 289 aaPredicted RBP25.31■■□□□ 1.64
UBE2D3-220ENST00000505307 ZNF521Q96K83 1311 aa25.31■■□□□ 1.64
UBE2D3-220ENST00000505307 C15orf52Q6ZUT6 534 aaKnown RBP25.3■■□□□ 1.64
UBE2D3-220ENST00000505307 FBXW7Q969H0 707 aa25.3■■□□□ 1.64
UBE2D3-220ENST00000505307 CHMP3Q9Y3E7 222 aa25.3■■□□□ 1.64
UBE2D3-220ENST00000505307 CCDC57Q2TAC2 916 aa25.29■■□□□ 1.64
UBE2D3-220ENST00000505307 LMBR1LQ6UX01 489 aa25.29■■□□□ 1.64
UBE2D3-220ENST00000505307 SRCIN1Q9C0H9 1055 aa25.29■■□□□ 1.64
UBE2D3-220ENST00000505307 TSKSQ9UJT2 592 aa25.29■■□□□ 1.64
UBE2D3-220ENST00000505307 ZNF157P51786 506 aaPredicted RBP25.28■■□□□ 1.64
UBE2D3-220ENST00000505307 HDAC9Q9UKV0 1011 aa25.28■■□□□ 1.64
UBE2D3-220ENST00000505307 FAM155AB1AL88 458 aaPredicted RBP25.27■■□□□ 1.64
UBE2D3-220ENST00000505307 CD209Q9NNX6 404 aa25.27■■□□□ 1.64
UBE2D3-220ENST00000505307 KLRK1P26718 216 aa25.26■■□□□ 1.63
UBE2D3-220ENST00000505307 TAF7LQ5H9L4 462 aa25.26■■□□□ 1.63
UBE2D3-220ENST00000505307 SLC4A10Q6U841 1118 aa25.26■■□□□ 1.63
UBE2D3-220ENST00000505307 MXD3Q9BW11 206 aa25.26■■□□□ 1.63
UBE2D3-220ENST00000505307 WNT10BO00744 389 aa25.25■■□□□ 1.63
UBE2D3-220ENST00000505307 GTF2IP78347 998 aa25.25■■□□□ 1.63
UBE2D3-220ENST00000505307 NBPF9Q3BBW0 867 aa25.25■■□□□ 1.63
UBE2D3-220ENST00000505307 LDHAL6AQ6ZMR3 332 aa25.25■■□□□ 1.63
UBE2D3-220ENST00000505307 E9PSI1 815 aa25.24■■□□□ 1.63
UBE2D3-220ENST00000505307 TAF5LO75529 589 aa25.24■■□□□ 1.63
UBE2D3-220ENST00000505307 EPHA10Q5JZY3 1008 aa25.24■■□□□ 1.63
UBE2D3-220ENST00000505307 ZNF804AQ7Z570 1209 aa25.24■■□□□ 1.63
UBE2D3-220ENST00000505307 REM2Q8IYK8 340 aaPredicted RBP25.24■■□□□ 1.63
UBE2D3-220ENST00000505307 IRS2Q9Y4H2 1338 aa25.23■■□□□ 1.63
UBE2D3-220ENST00000505307 SLC10A3P09131 477 aa25.23■■□□□ 1.63
UBE2D3-220ENST00000505307 HELBQ8NG08 1087 aaPredicted RBP25.23■■□□□ 1.63
UBE2D3-220ENST00000505307 ZIC5Q96T25 663 aa25.23■■□□□ 1.63
UBE2D3-220ENST00000505307 CNNM1Q9NRU3 951 aa25.23■■□□□ 1.63
UBE2D3-220ENST00000505307 SAGE1Q9NXZ1 904 aa25.23■■□□□ 1.63
UBE2D3-220ENST00000505307 KIF23Q02241 960 aaPredicted RBP25.22■■□□□ 1.63
UBE2D3-220ENST00000505307 KIAA0825Q8IV33 1275 aa25.22■■□□□ 1.63
UBE2D3-220ENST00000505307 ABHD8Q96I13 439 aa25.22■■□□□ 1.63
UBE2D3-220ENST00000505307 UTYO14607 1347 aa25.21■■□□□ 1.63
UBE2D3-220ENST00000505307 PTPRCP08575 1304 aa25.21■■□□□ 1.63
UBE2D3-220ENST00000505307 IL1R1P14778 569 aa25.21■■□□□ 1.63
UBE2D3-220ENST00000505307 NF2P35240 595 aa25.21■■□□□ 1.63
UBE2D3-220ENST00000505307 FKBP1AP62942 108 aaKnown RBP25.21■■□□□ 1.63
UBE2D3-220ENST00000505307 APOBEC3FQ8IUX4 373 aaKnown RBP25.21■■□□□ 1.63
UBE2D3-220ENST00000505307 ZNF646O15015 1829 aaPredicted RBP25.21■■□□□ 1.63
UBE2D3-220ENST00000505307 PAPPA2Q9BXP8 1791 aa25.21■■□□□ 1.63
UBE2D3-220ENST00000505307 MRPL50Q8N5N7 158 aaKnown RBP25.2■■□□□ 1.62
UBE2D3-220ENST00000505307 ZBED3Q96IU2 234 aaPredicted RBP25.2■■□□□ 1.62
UBE2D3-220ENST00000505307 SNAP23O00161 211 aa25.19■■□□□ 1.62
UBE2D3-220ENST00000505307 ZNF594Q96JF6 807 aaPredicted RBP25.19■■□□□ 1.62
UBE2D3-220ENST00000505307 SASH1O94885 1247 aa25.18■■□□□ 1.62
UBE2D3-220ENST00000505307 UBE4AQ14139 1066 aa25.18■■□□□ 1.62
UBE2D3-220ENST00000505307 MTMR14Q8NCE2 650 aa25.18■■□□□ 1.62
UBE2D3-220ENST00000505307 SUCLG2Q96I99 432 aa25.18■■□□□ 1.62
UBE2D3-220ENST00000505307 PLIN1O60240 522 aa25.17■■□□□ 1.62
UBE2D3-220ENST00000505307 DLGAP5Q15398 846 aa25.17■■□□□ 1.62
UBE2D3-220ENST00000505307 RASAL3Q86YV0 1011 aa25.17■■□□□ 1.62
UBE2D3-220ENST00000505307 NBPF7P0C2Y1 421 aaPredicted RBP25.16■■□□□ 1.62
UBE2D3-220ENST00000505307 SLFN5Q08AF3 891 aa25.16■■□□□ 1.62
UBE2D3-220ENST00000505307 KAZALD1Q96I82 304 aa25.16■■□□□ 1.62
UBE2D3-220ENST00000505307 CSRNP1Q96S65 589 aa25.16■■□□□ 1.62
UBE2D3-220ENST00000505307 TTLL12Q14166 644 aaPredicted RBP25.15■■□□□ 1.62
UBE2D3-220ENST00000505307 CERS5Q8N5B7 392 aa25.15■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms