RNA–Protein interactions for RNA: ENST00000505077.1

RFC1-210, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-210ENST00000505077 ZNF804BA4D1E1 1349 aa12.62□□□□□ -0.39
RFC1-210ENST00000505077 LTBP3Q9NS15 1303 aa12.62□□□□□ -0.39
RFC1-210ENST00000505077 SLC5A1P13866 664 aa12.62□□□□□ -0.39
RFC1-210ENST00000505077 ATP2B4P23634 1241 aa12.62□□□□□ -0.39
RFC1-210ENST00000505077 KCNJ4P48050 445 aa12.62□□□□□ -0.39
RFC1-210ENST00000505077 TNNI3KQ59H18 835 aa12.62□□□□□ -0.39
RFC1-210ENST00000505077 B4GALNT3Q6L9W6 998 aa12.62□□□□□ -0.39
RFC1-210ENST00000505077 DPP8Q6V1X1 898 aaPredicted RBP12.62□□□□□ -0.39
RFC1-210ENST00000505077 C15orf52Q6ZUT6 534 aaKnown RBP12.62□□□□□ -0.39
RFC1-210ENST00000505077 CHD1LQ86WJ1 897 aa12.62□□□□□ -0.39
RFC1-210ENST00000505077 VPS33BQ9H267 617 aa12.62□□□□□ -0.39
RFC1-210ENST00000505077 GGA1Q9UJY5 639 aa12.62□□□□□ -0.39
RFC1-210ENST00000505077 NSFL1CQ9UNZ2 370 aaKnown RBP12.62□□□□□ -0.39
RFC1-210ENST00000505077 BCS1LQ9Y276 419 aa12.62□□□□□ -0.39
RFC1-210ENST00000505077 FPGT-TNNI3KV9GXZ4 949 aa12.62□□□□□ -0.39
RFC1-210ENST00000505077 UTRNP46939 3433 aa12.61□□□□□ -0.39
RFC1-210ENST00000505077 C21orf2O43822 256 aa12.61□□□□□ -0.39
RFC1-210ENST00000505077 UFL1O94874 794 aa12.61□□□□□ -0.39
RFC1-210ENST00000505077 IFIT1P09914 478 aaKnown RBP12.61□□□□□ -0.39
RFC1-210ENST00000505077 FGFR2P21802 821 aa12.61□□□□□ -0.39
RFC1-210ENST00000505077 GPSM2P81274 684 aa12.61□□□□□ -0.39
RFC1-210ENST00000505077 ANKRD45Q5TZF3 282 aa12.61□□□□□ -0.39
RFC1-210ENST00000505077 EYA3Q99504 573 aa12.61□□□□□ -0.39
RFC1-210ENST00000505077 A0A1B0GUL7 405 aa12.6□□□□□ -0.39
RFC1-210ENST00000505077 APBB1O00213 710 aa12.6□□□□□ -0.39
RFC1-210ENST00000505077 TAF5LO75529 589 aa12.6□□□□□ -0.39
RFC1-210ENST00000505077 AACSQ86V21 672 aa12.6□□□□□ -0.39
RFC1-210ENST00000505077 POTEDQ86YR6 584 aa12.6□□□□□ -0.39
RFC1-210ENST00000505077 TBC1D16Q8TBP0 767 aa12.6□□□□□ -0.39
RFC1-210ENST00000505077 GPATCH3Q96I76 525 aa12.6□□□□□ -0.39
RFC1-210ENST00000505077 TAOK3Q9H2K8 898 aa12.6□□□□□ -0.39
RFC1-210ENST00000505077 IFIT2P09913 472 aaKnown RBP12.59□□□□□ -0.39
RFC1-210ENST00000505077 FKBP4Q02790 459 aaKnown RBP eCLIP12.59□□□□□ -0.39
RFC1-210ENST00000505077 MKRN4PQ13434 485 aaPredicted RBP12.59□□□□□ -0.39
RFC1-210ENST00000505077 HELBQ8NG08 1087 aaPredicted RBP12.59□□□□□ -0.39
RFC1-210ENST00000505077 IL1RAPL2Q9NP60 686 aa12.59□□□□□ -0.39
RFC1-210ENST00000505077 AOX1Q06278 1338 aa12.59□□□□□ -0.39
RFC1-210ENST00000505077 IRS2Q9Y4H2 1338 aa12.59□□□□□ -0.39
RFC1-210ENST00000505077 C6orf229H3BNL8 230 aa12.58□□□□□ -0.4
RFC1-210ENST00000505077 CAVIN4Q5BKX8 364 aa12.58□□□□□ -0.4
RFC1-210ENST00000505077 ZNF804AQ7Z570 1209 aa12.58□□□□□ -0.4
RFC1-210ENST00000505077 EAF2Q96CJ1 260 aaPredicted RBP12.58□□□□□ -0.4
RFC1-210ENST00000505077 ZNF512BQ96KM6 892 aaPredicted RBP12.58□□□□□ -0.4
RFC1-210ENST00000505077 GNL3LQ9NVN8 582 aaKnown RBP12.58□□□□□ -0.4
RFC1-210ENST00000505077 TTC41PQ6P2S7 1318 aa12.58□□□□□ -0.4
RFC1-210ENST00000505077 ECM29Q5VYK3 1845 aa12.58□□□□□ -0.4
RFC1-210ENST00000505077 MYH2Q9UKX2 1941 aa12.57□□□□□ -0.4
RFC1-210ENST00000505077 SEMA3EO15041 775 aa12.57□□□□□ -0.4
RFC1-210ENST00000505077 GRIN3BO60391 1043 aa12.57□□□□□ -0.4
RFC1-210ENST00000505077 MX1P20591 662 aa12.57□□□□□ -0.4
RFC1-210ENST00000505077 KIAA2012Q0VF49 1180 aa12.57□□□□□ -0.4
RFC1-210ENST00000505077 WASHC4Q2M389 1173 aa12.57□□□□□ -0.4
RFC1-210ENST00000505077 CCDC158Q5M9N0 1113 aa12.57□□□□□ -0.4
RFC1-210ENST00000505077 GORABQ5T7V8 394 aa12.57□□□□□ -0.4
RFC1-210ENST00000505077 OLFM4Q6UX06 510 aa12.57□□□□□ -0.4
RFC1-210ENST00000505077 XAGE2Q96GT9 111 aa12.57□□□□□ -0.4
RFC1-210ENST00000505077 ZC3H12CQ9C0D7 883 aaKnown RBP12.57□□□□□ -0.4
RFC1-210ENST00000505077 LNPKQ9C0E8 428 aa12.57□□□□□ -0.4
RFC1-210ENST00000505077 POLLQ9UGP5 575 aa12.57□□□□□ -0.4
RFC1-210ENST00000505077 DBNLQ9UJU6 430 aaKnown RBP12.57□□□□□ -0.4
RFC1-210ENST00000505077 PDS5AQ29RF7 1337 aaKnown RBP12.57□□□□□ -0.4
RFC1-210ENST00000505077 SALL3Q9BXA9 1300 aa12.57□□□□□ -0.4
RFC1-210ENST00000505077 ERC2O15083 957 aa12.56□□□□□ -0.4
RFC1-210ENST00000505077 SMARCA5O60264 1052 aaPredicted RBP12.56□□□□□ -0.4
RFC1-210ENST00000505077 VPS37DQ86XT2 251 aa12.56□□□□□ -0.4
RFC1-210ENST00000505077 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.56□□□□□ -0.4
RFC1-210ENST00000505077 NEUROD6Q96NK8 337 aa12.56□□□□□ -0.4
RFC1-210ENST00000505077 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.56□□□□□ -0.4
RFC1-210ENST00000505077 NFKBIEO00221 500 aa12.55□□□□□ -0.4
RFC1-210ENST00000505077 UQCRFS1P1P0C7P4 283 aa12.55□□□□□ -0.4
RFC1-210ENST00000505077 YBX3P16989 372 aaKnown RBP eCLIP12.55□□□□□ -0.4
RFC1-210ENST00000505077 ARID4AP29374 1257 aaPredicted RBP12.55□□□□□ -0.4
RFC1-210ENST00000505077 HIBADHP31937 336 aaKnown RBP12.55□□□□□ -0.4
RFC1-210ENST00000505077 TIMM10P62072 90 aa12.55□□□□□ -0.4
RFC1-210ENST00000505077 FBXO33Q7Z6M2 555 aa12.55□□□□□ -0.4
RFC1-210ENST00000505077 SLC51AQ86UW1 340 aa12.55□□□□□ -0.4
RFC1-210ENST00000505077 DBNDD2Q9BQY9 259 aa12.55□□□□□ -0.4
RFC1-210ENST00000505077 COA1Q9GZY4 146 aa12.55□□□□□ -0.4
RFC1-210ENST00000505077 OSBPL3Q9H4L5 887 aa12.55□□□□□ -0.4
RFC1-210ENST00000505077 ECHDC1Q9NTX5 307 aa12.55□□□□□ -0.4
RFC1-210ENST00000505077 STAP2Q9UGK3 403 aa12.55□□□□□ -0.4
RFC1-210ENST00000505077 COL4A5P29400 1685 aa12.54□□□□□ -0.4
RFC1-210ENST00000505077 PPIP5K2O43314 1243 aa12.54□□□□□ -0.4
RFC1-210ENST00000505077 LMNB1P20700 586 aa12.54□□□□□ -0.4
RFC1-210ENST00000505077 ADORA1P30542 326 aa12.54□□□□□ -0.4
RFC1-210ENST00000505077 IARSP41252 1262 aaKnown RBP12.54□□□□□ -0.4
RFC1-210ENST00000505077 GPR162Q16538 588 aa12.54□□□□□ -0.4
RFC1-210ENST00000505077 CCDC102BQ68D86 513 aa12.54□□□□□ -0.4
RFC1-210ENST00000505077 FAM84BQ96KN1 310 aaPredicted RBP12.54□□□□□ -0.4
RFC1-210ENST00000505077 CCDC8Q9H0W5 538 aaPredicted RBP12.54□□□□□ -0.4
RFC1-210ENST00000505077 TLR7Q9NYK1 1049 aaKnown RBP12.54□□□□□ -0.4
RFC1-210ENST00000505077 WWC3Q9ULE0 1092 aa12.54□□□□□ -0.4
RFC1-210ENST00000505077 SCN4AP35499 1836 aa12.53□□□□□ -0.4
RFC1-210ENST00000505077 CDK5RAP2Q96SN8 1893 aa12.53□□□□□ -0.4
RFC1-210ENST00000505077 SNAP23O00161 211 aa12.53□□□□□ -0.4
RFC1-210ENST00000505077 IGSF3O75054 1194 aa12.53□□□□□ -0.4
RFC1-210ENST00000505077 GLRX3O76003 335 aaKnown RBP12.53□□□□□ -0.4
RFC1-210ENST00000505077 IL1R1P14778 569 aa12.53□□□□□ -0.4
RFC1-210ENST00000505077 ATP5JP18859 108 aa12.53□□□□□ -0.4
RFC1-210ENST00000505077 KLRK1P26718 216 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms