RNA–Protein interactions for RNA: ENST00000505054.2

SYNE4-207, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 713 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-207ENST00000505054 ANKRD44Q8N8A2 993 aa21.17■□□□□ 0.98
SYNE4-207ENST00000505054 BICC1Q9H694 974 aaKnown RBP21.17■□□□□ 0.98
SYNE4-207ENST00000505054 TSKSQ9UJT2 592 aa21.17■□□□□ 0.98
SYNE4-207ENST00000505054 POLR2AP24928 1970 aaKnown RBP21.17■□□□□ 0.98
SYNE4-207ENST00000505054 PLIN1O60240 522 aa21.16■□□□□ 0.98
SYNE4-207ENST00000505054 UBTFL1P0CB47 393 aaPredicted RBP21.16■□□□□ 0.98
SYNE4-207ENST00000505054 RABL6Q3YEC7 729 aaPredicted RBP21.16■□□□□ 0.98
SYNE4-207ENST00000505054 ANKRD18AQ8IVF6 992 aa21.16■□□□□ 0.98
SYNE4-207ENST00000505054 DPF2Q92785 391 aa21.16■□□□□ 0.98
SYNE4-207ENST00000505054 CDC5LQ99459 802 aaKnown RBP21.16■□□□□ 0.98
SYNE4-207ENST00000505054 PSME4Q14997 1843 aa21.15■□□□□ 0.98
SYNE4-207ENST00000505054 SHTN1A0MZ66 631 aa21.15■□□□□ 0.98
SYNE4-207ENST00000505054 WASHC4Q2M389 1173 aa21.15■□□□□ 0.98
SYNE4-207ENST00000505054 PANK1Q8TE04 598 aa21.15■□□□□ 0.98
SYNE4-207ENST00000505054 CHMP3Q9Y3E7 222 aa21.15■□□□□ 0.98
SYNE4-207ENST00000505054 SCN9AQ15858 1988 aa21.15■□□□□ 0.98
SYNE4-207ENST00000505054 PSMD14O00487 310 aa21.14■□□□□ 0.97
SYNE4-207ENST00000505054 DBNDD1Q9H9R9 158 aa21.14■□□□□ 0.97
SYNE4-207ENST00000505054 ZBTB12Q9Y330 459 aaPredicted RBP21.14■□□□□ 0.97
SYNE4-207ENST00000505054 ANKRD18BA2A2Z9 1011 aa21.13■□□□□ 0.97
SYNE4-207ENST00000505054 CCDC85CA6NKD9 419 aa21.13■□□□□ 0.97
SYNE4-207ENST00000505054 RPS12P25398 132 aaKnown RBP21.13■□□□□ 0.97
SYNE4-207ENST00000505054 NOGQ13253 232 aa21.13■□□□□ 0.97
SYNE4-207ENST00000505054 IFIT5Q13325 482 aaKnown RBP21.13■□□□□ 0.97
SYNE4-207ENST00000505054 NSFL1CQ9UNZ2 370 aaKnown RBP21.13■□□□□ 0.97
SYNE4-207ENST00000505054 LRRFIP2Q9Y608 721 aaKnown RBP21.13■□□□□ 0.97
SYNE4-207ENST00000505054 GNAI3P08754 354 aa21.12■□□□□ 0.97
SYNE4-207ENST00000505054 ITPRIPQ8IWB1 547 aa21.12■□□□□ 0.97
SYNE4-207ENST00000505054 EYA3Q99504 573 aa21.12■□□□□ 0.97
SYNE4-207ENST00000505054 BSDC1Q9NW68 430 aaPredicted RBP21.12■□□□□ 0.97
SYNE4-207ENST00000505054 C6orf229H3BNL8 230 aa21.11■□□□□ 0.97
SYNE4-207ENST00000505054 ECE2O60344 883 aa21.11■□□□□ 0.97
SYNE4-207ENST00000505054 HUNKP57058 714 aa21.11■□□□□ 0.97
SYNE4-207ENST00000505054 GPSM2P81274 684 aa21.11■□□□□ 0.97
SYNE4-207ENST00000505054 USP48Q86UV5 1035 aa21.11■□□□□ 0.97
SYNE4-207ENST00000505054 POLLQ9UGP5 575 aa21.11■□□□□ 0.97
SYNE4-207ENST00000505054 SPEF2Q9C093 1822 aa21.11■□□□□ 0.97
SYNE4-207ENST00000505054 IGHMBP2P38935 993 aaKnown RBP21.1■□□□□ 0.97
SYNE4-207ENST00000505054 CCDC57Q2TAC2 916 aa21.1■□□□□ 0.97
SYNE4-207ENST00000505054 TBC1D10BQ4KMP7 808 aaPredicted RBP21.1■□□□□ 0.97
SYNE4-207ENST00000505054 SAMD7Q7Z3H4 446 aa21.1■□□□□ 0.97
SYNE4-207ENST00000505054 KRT26Q7Z3Y9 468 aa21.1■□□□□ 0.97
SYNE4-207ENST00000505054 ZNF594Q96JF6 807 aaPredicted RBP21.1■□□□□ 0.97
SYNE4-207ENST00000505054 AKAP11Q9UKA4 1901 aa21.1■□□□□ 0.97
SYNE4-207ENST00000505054 RIMBP2O15034 1052 aa21.09■□□□□ 0.97
SYNE4-207ENST00000505054 MS4A1P11836 297 aa21.09■□□□□ 0.97
SYNE4-207ENST00000505054 RGS19P49795 217 aa21.09■□□□□ 0.97
SYNE4-207ENST00000505054 C20orf194Q5TEA3 1177 aa21.09■□□□□ 0.97
SYNE4-207ENST00000505054 MCOLN1Q9GZU1 580 aa21.09■□□□□ 0.97
SYNE4-207ENST00000505054 ZNF609O15014 1411 aa21.09■□□□□ 0.97
SYNE4-207ENST00000505054 EGFRP00533 1210 aa21.08■□□□□ 0.97
SYNE4-207ENST00000505054 MLLT1Q03111 559 aaPredicted RBP21.08■□□□□ 0.97
SYNE4-207ENST00000505054 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.08■□□□□ 0.97
SYNE4-207ENST00000505054 TBC1D16Q8TBP0 767 aa21.08■□□□□ 0.97
SYNE4-207ENST00000505054 MPHOSPH8Q99549 860 aa21.08■□□□□ 0.97
SYNE4-207ENST00000505054 GBA2Q9HCG7 927 aaPredicted RBP21.08■□□□□ 0.97
SYNE4-207ENST00000505054 PODXL2Q9NZ53 605 aa21.08■□□□□ 0.97
SYNE4-207ENST00000505054 MINPP1Q9UNW1 487 aa21.08■□□□□ 0.97
SYNE4-207ENST00000505054 HDAC5Q9UQL6 1122 aa21.08■□□□□ 0.97
SYNE4-207ENST00000505054 ZBTB7BO15156 539 aaPredicted RBP21.07■□□□□ 0.96
SYNE4-207ENST00000505054 RFX5P48382 616 aaPredicted RBP21.07■□□□□ 0.96
SYNE4-207ENST00000505054 DCPSQ96C86 337 aaKnown RBP21.07■□□□□ 0.96
SYNE4-207ENST00000505054 XDHP47989 1333 aa21.06■□□□□ 0.96
SYNE4-207ENST00000505054 GNAI2P04899 355 aa21.06■□□□□ 0.96
SYNE4-207ENST00000505054 MVPQ14764 893 aaKnown RBP21.06■□□□□ 0.96
SYNE4-207ENST00000505054 DOK7Q18PE1 504 aa21.06■□□□□ 0.96
SYNE4-207ENST00000505054 KIF4BQ2VIQ3 1234 aa21.06■□□□□ 0.96
SYNE4-207ENST00000505054 TAF7LQ5H9L4 462 aa21.06■□□□□ 0.96
SYNE4-207ENST00000505054 RGMBQ6NW40 437 aa21.06■□□□□ 0.96
SYNE4-207ENST00000505054 DLK2Q6UY11 383 aa21.06■□□□□ 0.96
SYNE4-207ENST00000505054 C2orf69Q8N8R5 385 aa21.06■□□□□ 0.96
SYNE4-207ENST00000505054 ZIC5Q96T25 663 aa21.06■□□□□ 0.96
SYNE4-207ENST00000505054 COG6Q9Y2V7 657 aa21.06■□□□□ 0.96
SYNE4-207ENST00000505054 FAM155AB1AL88 458 aaPredicted RBP21.05■□□□□ 0.96
SYNE4-207ENST00000505054 ADM5C9JUS6 153 aa21.05■□□□□ 0.96
SYNE4-207ENST00000505054 RRP1P56182 461 aaKnown RBP21.05■□□□□ 0.96
SYNE4-207ENST00000505054 PDE3AQ14432 1141 aa21.05■□□□□ 0.96
SYNE4-207ENST00000505054 KLHDC4Q8TBB5 520 aa21.05■□□□□ 0.96
SYNE4-207ENST00000505054 ANKIB1Q9P2G1 1089 aa21.05■□□□□ 0.96
SYNE4-207ENST00000505054 UFL1O94874 794 aa21.04■□□□□ 0.96
SYNE4-207ENST00000505054 VIL1P09327 827 aaKnown RBP21.04■□□□□ 0.96
SYNE4-207ENST00000505054 CHRNDQ07001 517 aa21.04■□□□□ 0.96
SYNE4-207ENST00000505054 MTX1Q13505 466 aa21.04■□□□□ 0.96
SYNE4-207ENST00000505054 DGKZQ13574 1117 aa21.04■□□□□ 0.96
SYNE4-207ENST00000505054 RBM26Q5T8P6 1007 aaKnown RBP21.04■□□□□ 0.96
SYNE4-207ENST00000505054 LDHAL6AQ6ZMR3 332 aa21.04■□□□□ 0.96
SYNE4-207ENST00000505054 PUS3Q9BZE2 481 aaKnown RBP21.04■□□□□ 0.96
SYNE4-207ENST00000505054 ZC3H12CQ9C0D7 883 aaKnown RBP21.04■□□□□ 0.96
SYNE4-207ENST00000505054 KCNQ5Q9NR82 932 aa21.04■□□□□ 0.96
SYNE4-207ENST00000505054 SAGE1Q9NXZ1 904 aa21.04■□□□□ 0.96
SYNE4-207ENST00000505054 GGA3Q9NZ52 723 aa21.04■□□□□ 0.96
SYNE4-207ENST00000505054 GGA1Q9UJY5 639 aa21.04■□□□□ 0.96
SYNE4-207ENST00000505054 PAPPA2Q9BXP8 1791 aa21.03■□□□□ 0.96
SYNE4-207ENST00000505054 WTIPA6NIX2 430 aaPredicted RBP21.03■□□□□ 0.96
SYNE4-207ENST00000505054 CCDC102AQ96A19 550 aa21.03■□□□□ 0.96
SYNE4-207ENST00000505054 C1orf115Q9H7X2 142 aa21.03■□□□□ 0.96
SYNE4-207ENST00000505054 SLC34A2O95436 690 aa21.02■□□□□ 0.96
SYNE4-207ENST00000505054 PTPN12Q05209 780 aaKnown RBP21.02■□□□□ 0.96
SYNE4-207ENST00000505054 SULF1Q8IWU6 871 aa21.02■□□□□ 0.96
SYNE4-207ENST00000505054 ANKRD2Q9GZV1 360 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms