RNA–Protein interactions for RNA: ENST00000505017.1

DEPDC1B-203, Transcript of DEP domain containing 1B, humanhuman

TSL 3

Gene DEPDC1B, Length 854 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-203ENST00000505017 MAP4K3Q8IVH8 894 aa9.46□□□□□ -0.9
DEPDC1B-203ENST00000505017 CACTIN-AS1Q8N1I8 211 aa9.46□□□□□ -0.9
DEPDC1B-203ENST00000505017 SPACA7Q96KW9 195 aa9.46□□□□□ -0.9
DEPDC1B-203ENST00000505017 POLIQ9UNA4 740 aa9.46□□□□□ -0.9
DEPDC1B-203ENST00000505017 ADAM11O75078 769 aa9.45□□□□□ -0.9
DEPDC1B-203ENST00000505017 ARTNQ5T4W7 220 aa9.45□□□□□ -0.9
DEPDC1B-203ENST00000505017 PRR23CQ6ZRP0 262 aa9.45□□□□□ -0.9
DEPDC1B-203ENST00000505017 NCAPG2Q86XI2 1143 aa9.45□□□□□ -0.9
DEPDC1B-203ENST00000505017 UBL7Q96S82 380 aaPredicted RBP9.45□□□□□ -0.9
DEPDC1B-203ENST00000505017 ADAM19Q9H013 955 aa9.45□□□□□ -0.9
DEPDC1B-203ENST00000505017 DZANK1Q9NVP4 752 aa9.45□□□□□ -0.9
DEPDC1B-203ENST00000505017 FSCN2O14926 492 aa9.44□□□□□ -0.9
DEPDC1B-203ENST00000505017 DDX3YO15523 660 aaKnown RBP9.44□□□□□ -0.9
DEPDC1B-203ENST00000505017 FZD6O60353 706 aa9.44□□□□□ -0.9
DEPDC1B-203ENST00000505017 FOXD4L4Q8WXT5 416 aaPredicted RBP9.44□□□□□ -0.9
DEPDC1B-203ENST00000505017 MUC3BQ9H195 1237 aa9.44□□□□□ -0.9
DEPDC1B-203ENST00000505017 C8orf34Q49A92 452 aa9.43□□□□□ -0.9
DEPDC1B-203ENST00000505017 KIAA1211Q6ZU35 1233 aa9.43□□□□□ -0.9
DEPDC1B-203ENST00000505017 CES1P23141 567 aa9.42□□□□□ -0.9
DEPDC1B-203ENST00000505017 CD68P34810 354 aaPredicted RBP9.42□□□□□ -0.9
DEPDC1B-203ENST00000505017 ECM1Q16610 540 aa9.42□□□□□ -0.9
DEPDC1B-203ENST00000505017 HGSNATQ68CP4 663 aa9.42□□□□□ -0.9
DEPDC1B-203ENST00000505017 KLHDC7BQ96G42 594 aa9.42□□□□□ -0.9
DEPDC1B-203ENST00000505017 ANO2Q9NQ90 1003 aa9.42□□□□□ -0.9
DEPDC1B-203ENST00000505017 EREGO14944 169 aa9.41□□□□□ -0.9
DEPDC1B-203ENST00000505017 CCDC87Q9NVE4 849 aa9.41□□□□□ -0.9
DEPDC1B-203ENST00000505017 FOXD3Q9UJU5 478 aaPredicted RBP9.41□□□□□ -0.9
DEPDC1B-203ENST00000505017 SCO2A0A1W2PP80 73 aa9.4□□□□□ -0.9
DEPDC1B-203ENST00000505017 TNFRSF21O75509 655 aa9.4□□□□□ -0.9
DEPDC1B-203ENST00000505017 RPLP1P05386 114 aaKnown RBP9.4□□□□□ -0.9
DEPDC1B-203ENST00000505017 PTPRAP18433 802 aa9.4□□□□□ -0.9
DEPDC1B-203ENST00000505017 ZNF211Q13398 564 aaPredicted RBP9.4□□□□□ -0.9
DEPDC1B-203ENST00000505017 ARMC10Q8N2F6 343 aa9.4□□□□□ -0.9
DEPDC1B-203ENST00000505017 UBASH3BQ8TF42 649 aa9.4□□□□□ -0.9
DEPDC1B-203ENST00000505017 GLB1P16278 677 aa9.39□□□□□ -0.91
DEPDC1B-203ENST00000505017 C14orf37Q86TY3 774 aa9.39□□□□□ -0.91
DEPDC1B-203ENST00000505017 ZKSCAN3Q9BRR0 538 aa9.39□□□□□ -0.91
DEPDC1B-203ENST00000505017 KRTAP4-8Q9BYQ9 185 aa9.39□□□□□ -0.91
DEPDC1B-203ENST00000505017 ZFP64Q9NPA5 681 aa9.39□□□□□ -0.91
DEPDC1B-203ENST00000505017 SOX13Q9UN79 622 aa9.39□□□□□ -0.91
DEPDC1B-203ENST00000505017 CCDC180Q9P1Z9 1646 aa9.38□□□□□ -0.91
DEPDC1B-203ENST00000505017 PDE2AO00408 941 aaPredicted RBP9.38□□□□□ -0.91
DEPDC1B-203ENST00000505017 HYAL3O43820 417 aaPredicted RBP9.38□□□□□ -0.91
DEPDC1B-203ENST00000505017 FKBP4Q02790 459 aaKnown RBP eCLIP9.38□□□□□ -0.91
DEPDC1B-203ENST00000505017 PEAR1Q5VY43 1037 aaPredicted RBP9.38□□□□□ -0.91
DEPDC1B-203ENST00000505017 ACAD11Q709F0 780 aa9.38□□□□□ -0.91
DEPDC1B-203ENST00000505017 GJD3Q8N144 294 aa9.38□□□□□ -0.91
DEPDC1B-203ENST00000505017 NXPE3Q969Y0 559 aa9.38□□□□□ -0.91
DEPDC1B-203ENST00000505017 LATS2Q9NRM7 1088 aa9.38□□□□□ -0.91
DEPDC1B-203ENST00000505017 ALKBH2Q6NS38 261 aa9.37□□□□□ -0.91
DEPDC1B-203ENST00000505017 KLHL23Q8NBE8 558 aa9.37□□□□□ -0.91
DEPDC1B-203ENST00000505017 H3BRJ5 948 aa9.36□□□□□ -0.91
DEPDC1B-203ENST00000505017 FAM13AO94988 1023 aa9.36□□□□□ -0.91
DEPDC1B-203ENST00000505017 PCSK2P16519 638 aa9.36□□□□□ -0.91
DEPDC1B-203ENST00000505017 FSTP19883 344 aa9.36□□□□□ -0.91
DEPDC1B-203ENST00000505017 LRP8Q14114 963 aa9.36□□□□□ -0.91
DEPDC1B-203ENST00000505017 VN1R5Q7Z5H4 357 aa9.36□□□□□ -0.91
DEPDC1B-203ENST00000505017 TMEM102Q8N9M5 508 aaPredicted RBP9.36□□□□□ -0.91
DEPDC1B-203ENST00000505017 OSMRQ99650 979 aa9.36□□□□□ -0.91
DEPDC1B-203ENST00000505017 SEC31BQ9NQW1 1179 aa9.36□□□□□ -0.91
DEPDC1B-203ENST00000505017 ABL1P00519 1130 aa9.35□□□□□ -0.91
DEPDC1B-203ENST00000505017 SF3B2Q13435 895 aaKnown RBP9.35□□□□□ -0.91
DEPDC1B-203ENST00000505017 DCAF11Q8TEB1 546 aa9.35□□□□□ -0.91
DEPDC1B-203ENST00000505017 FAM46AQ96IP4 442 aaKnown RBP9.35□□□□□ -0.91
DEPDC1B-203ENST00000505017 RNF112Q9ULX5 631 aa9.35□□□□□ -0.91
DEPDC1B-203ENST00000505017 PIP4K2BP78356 416 aa9.34□□□□□ -0.91
DEPDC1B-203ENST00000505017 DUOXA2Q1HG44 320 aa9.34□□□□□ -0.91
DEPDC1B-203ENST00000505017 SOX1O00570 391 aaPredicted RBP9.33□□□□□ -0.92
DEPDC1B-203ENST00000505017 PHACTR2O75167 634 aa9.33□□□□□ -0.92
DEPDC1B-203ENST00000505017 SERPINB4P48594 390 aa9.33□□□□□ -0.92
DEPDC1B-203ENST00000505017 AAMPQ13685 434 aa9.33□□□□□ -0.92
DEPDC1B-203ENST00000505017 SNX29Q8TEQ0 813 aa9.33□□□□□ -0.92
DEPDC1B-203ENST00000505017 PMEPA1Q969W9 287 aa9.33□□□□□ -0.92
DEPDC1B-203ENST00000505017 ICMTO60725 284 aa9.32□□□□□ -0.92
DEPDC1B-203ENST00000505017 NLRP12P59046 1061 aa9.32□□□□□ -0.92
DEPDC1B-203ENST00000505017 WNT8BQ93098 351 aa9.32□□□□□ -0.92
DEPDC1B-203ENST00000505017 RAXQ9Y2V3 346 aa9.32□□□□□ -0.92
DEPDC1B-203ENST00000505017 DLGAP3O95886 979 aa9.31□□□□□ -0.92
DEPDC1B-203ENST00000505017 POLR3DP05423 398 aaPredicted RBP9.31□□□□□ -0.92
DEPDC1B-203ENST00000505017 FAM117BQ6P1L5 589 aa9.31□□□□□ -0.92
DEPDC1B-203ENST00000505017 SLC7A3Q8WY07 619 aa9.31□□□□□ -0.92
DEPDC1B-203ENST00000505017 BHLHE41Q9C0J9 482 aaPredicted RBP9.31□□□□□ -0.92
DEPDC1B-203ENST00000505017 ZFYVE28Q9HCC9 887 aa9.31□□□□□ -0.92
DEPDC1B-203ENST00000505017 OSGEPQ9NPF4 335 aa9.31□□□□□ -0.92
DEPDC1B-203ENST00000505017 METTL12A8MUP2 240 aa9.3□□□□□ -0.92
DEPDC1B-203ENST00000505017 MED26O95402 600 aa9.3□□□□□ -0.92
DEPDC1B-203ENST00000505017 USP5P45974 858 aa9.3□□□□□ -0.92
DEPDC1B-203ENST00000505017 PREPP48147 710 aa9.3□□□□□ -0.92
DEPDC1B-203ENST00000505017 ARHGAP4P98171 946 aa9.3□□□□□ -0.92
DEPDC1B-203ENST00000505017 BSNDQ8WZ55 320 aa9.3□□□□□ -0.92
DEPDC1B-203ENST00000505017 USTQ9Y2C2 406 aa9.3□□□□□ -0.92
DEPDC1B-203ENST00000505017 EHHADHQ08426 723 aa9.29□□□□□ -0.92
DEPDC1B-203ENST00000505017 TTC16Q8NEE8 873 aa9.29□□□□□ -0.92
DEPDC1B-203ENST00000505017 MYRFLQ96LU7 910 aa9.29□□□□□ -0.92
DEPDC1B-203ENST00000505017 EGFL7Q9UHF1 273 aa9.29□□□□□ -0.92
DEPDC1B-203ENST00000505017 EDN3P14138 238 aa9.28□□□□□ -0.92
DEPDC1B-203ENST00000505017 CABP4P57796 275 aa9.28□□□□□ -0.92
DEPDC1B-203ENST00000505017 USPL1Q5W0Q7 1092 aa9.28□□□□□ -0.92
DEPDC1B-203ENST00000505017 TRIM42Q8IWZ5 723 aa9.28□□□□□ -0.92
DEPDC1B-203ENST00000505017 CEP41Q9BYV8 373 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms