RNA–Protein interactions for RNA: ENST00000504905.5

HERC6-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 3

Gene HERC6, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-205ENST00000504905 CLEC11AQ9Y240 323 aa25.2■■□□□ 1.62
HERC6-205ENST00000504905 MED23Q9ULK4 1368 aa25.19■■□□□ 1.62
HERC6-205ENST00000504905 WTIPA6NIX2 430 aaPredicted RBP25.19■■□□□ 1.62
HERC6-205ENST00000504905 TAF5LO75529 589 aa25.19■■□□□ 1.62
HERC6-205ENST00000504905 RFX5P48382 616 aaPredicted RBP25.19■■□□□ 1.62
HERC6-205ENST00000504905 DOK7Q18PE1 504 aa25.19■■□□□ 1.62
HERC6-205ENST00000504905 GPC2Q8N158 579 aa25.19■■□□□ 1.62
HERC6-205ENST00000504905 WBP1LQ9NX94 342 aa25.19■■□□□ 1.62
HERC6-205ENST00000504905 MROH5Q6ZUA9 1318 aa25.18■■□□□ 1.62
HERC6-205ENST00000504905 ZBTB7BO15156 539 aaPredicted RBP25.18■■□□□ 1.62
HERC6-205ENST00000504905 ECE2O60344 883 aa25.18■■□□□ 1.62
HERC6-205ENST00000504905 LRRC24Q50LG9 513 aa25.18■■□□□ 1.62
HERC6-205ENST00000504905 RIPOR2Q9Y4F9 1068 aa25.18■■□□□ 1.62
HERC6-205ENST00000504905 GJA3Q9Y6H8 435 aa25.18■■□□□ 1.62
HERC6-205ENST00000504905 RASSF10A6NK89 507 aa25.17■■□□□ 1.62
HERC6-205ENST00000504905 PTPN12Q05209 780 aaKnown RBP25.17■■□□□ 1.62
HERC6-205ENST00000504905 MVPQ14764 893 aaKnown RBP25.17■■□□□ 1.62
HERC6-205ENST00000504905 CNTROBQ8N137 903 aa25.17■■□□□ 1.62
HERC6-205ENST00000504905 YDJCA8MPS7 323 aa25.16■■□□□ 1.62
HERC6-205ENST00000504905 SRGAP3O43295 1099 aa25.16■■□□□ 1.62
HERC6-205ENST00000504905 CXCL9Q07325 125 aa25.16■■□□□ 1.62
HERC6-205ENST00000504905 MTX1Q13505 466 aa25.16■■□□□ 1.62
HERC6-205ENST00000504905 PDE3AQ14432 1141 aa25.16■■□□□ 1.62
HERC6-205ENST00000504905 METTL24Q5JXM2 366 aa25.16■■□□□ 1.62
HERC6-205ENST00000504905 COG6Q9Y2V7 657 aa25.16■■□□□ 1.62
HERC6-205ENST00000504905 EYA2O00167 538 aa25.15■■□□□ 1.62
HERC6-205ENST00000504905 RAD17O75943 681 aa25.15■■□□□ 1.62
HERC6-205ENST00000504905 DEFB115Q30KQ5 88 aa25.15■■□□□ 1.62
HERC6-205ENST00000504905 MAP1SQ66K74 1059 aaPredicted RBP25.15■■□□□ 1.62
HERC6-205ENST00000504905 CIAPIN1Q6FI81 312 aa25.15■■□□□ 1.62
HERC6-205ENST00000504905 SNAP23O00161 211 aa25.14■■□□□ 1.62
HERC6-205ENST00000504905 TNIP1Q15025 636 aa25.14■■□□□ 1.62
HERC6-205ENST00000504905 SIL1Q9H173 461 aa25.14■■□□□ 1.62
HERC6-205ENST00000504905 C1orf115Q9H7X2 142 aa25.14■■□□□ 1.62
HERC6-205ENST00000504905 DDX19BQ9UMR2 479 aa25.14■■□□□ 1.62
HERC6-205ENST00000504905 KLRK1P26718 216 aa25.13■■□□□ 1.61
HERC6-205ENST00000504905 FBXO3Q9UK99 471 aa25.13■■□□□ 1.61
HERC6-205ENST00000504905 SCN9AQ15858 1988 aa25.13■■□□□ 1.61
HERC6-205ENST00000504905 LBX1P52954 281 aa25.12■■□□□ 1.61
HERC6-205ENST00000504905 UBE4AQ14139 1066 aa25.12■■□□□ 1.61
HERC6-205ENST00000504905 C20orf194Q5TEA3 1177 aa25.12■■□□□ 1.61
HERC6-205ENST00000504905 TXNRD3Q86VQ6 643 aa25.12■■□□□ 1.61
HERC6-205ENST00000504905 COPRSQ9NQ92 184 aa25.12■■□□□ 1.61
HERC6-205ENST00000504905 PA2G4Q9UQ80 394 aaKnown RBP25.12■■□□□ 1.61
HERC6-205ENST00000504905 CIAO1O76071 339 aa25.11■■□□□ 1.61
HERC6-205ENST00000504905 PODNQ7Z5L7 613 aa25.11■■□□□ 1.61
HERC6-205ENST00000504905 COA1Q9GZY4 146 aa25.11■■□□□ 1.61
HERC6-205ENST00000504905 CHMP4BQ9H444 224 aaKnown RBP25.11■■□□□ 1.61
HERC6-205ENST00000504905 PSME4Q14997 1843 aa25.11■■□□□ 1.61
HERC6-205ENST00000504905 PNMA6EA0A0J9YXQ4 647 aa25.1■■□□□ 1.61
HERC6-205ENST00000504905 PDE8BO95263 885 aa25.1■■□□□ 1.61
HERC6-205ENST00000504905 C15orf52Q6ZUT6 534 aaKnown RBP25.1■■□□□ 1.61
HERC6-205ENST00000504905 ATG9AQ7Z3C6 839 aa25.1■■□□□ 1.61
HERC6-205ENST00000504905 VGLL2Q8N8G2 317 aa25.1■■□□□ 1.61
HERC6-205ENST00000504905 KCNQ5Q9NR82 932 aa25.1■■□□□ 1.61
HERC6-205ENST00000504905 WDR33Q9C0J8 1336 aaKnown RBP25.1■■□□□ 1.61
HERC6-205ENST00000504905 PSMD14O00487 310 aa25.09■■□□□ 1.61
HERC6-205ENST00000504905 LMOD1P29536 600 aaPredicted RBP25.09■■□□□ 1.61
HERC6-205ENST00000504905 RRP1P56182 461 aaKnown RBP25.09■■□□□ 1.61
HERC6-205ENST00000504905 MAP2K1Q02750 393 aaPredicted RBP25.09■■□□□ 1.61
HERC6-205ENST00000504905 IRS2Q9Y4H2 1338 aa25.09■■□□□ 1.61
HERC6-205ENST00000504905 HSPA8P11142 646 aaKnown RBP25.08■■□□□ 1.61
HERC6-205ENST00000504905 IL15P40933 162 aaPredicted RBP25.08■■□□□ 1.61
HERC6-205ENST00000504905 ATP8B2P98198 1209 aa25.08■■□□□ 1.61
HERC6-205ENST00000504905 ZNF804AQ7Z570 1209 aa25.08■■□□□ 1.61
HERC6-205ENST00000504905 GMPSP49915 693 aaPredicted RBP25.07■■□□□ 1.6
HERC6-205ENST00000504905 ABT1Q9ULW3 272 aaKnown RBP25.07■■□□□ 1.6
HERC6-205ENST00000504905 SCNN1DP51172 638 aa25.06■■□□□ 1.6
HERC6-205ENST00000504905 PUM3Q15397 648 aaKnown RBP25.06■■□□□ 1.6
HERC6-205ENST00000504905 CEP126Q9P2H0 1117 aa25.06■■□□□ 1.6
HERC6-205ENST00000504905 USP17L3A6NCW0 530 aa25.05■■□□□ 1.6
HERC6-205ENST00000504905 USP17L4A6NCW7 530 aa25.05■■□□□ 1.6
HERC6-205ENST00000504905 POLA2Q14181 598 aa25.05■■□□□ 1.6
HERC6-205ENST00000504905 USP17L1Q7RTZ2 530 aa25.05■■□□□ 1.6
HERC6-205ENST00000504905 SSH3Q8TE77 659 aa25.05■■□□□ 1.6
HERC6-205ENST00000504905 CD209Q9NNX6 404 aa25.05■■□□□ 1.6
HERC6-205ENST00000504905 ZBTB40Q9NUA8 1239 aa25.05■■□□□ 1.6
HERC6-205ENST00000504905 VIL1P09327 827 aaKnown RBP25.04■■□□□ 1.6
HERC6-205ENST00000504905 CEP85Q6P2H3 762 aa25.04■■□□□ 1.6
HERC6-205ENST00000504905 FBXW7Q969H0 707 aa25.04■■□□□ 1.6
HERC6-205ENST00000504905 GPRC5DQ9NZD1 345 aa25.04■■□□□ 1.6
HERC6-205ENST00000504905 ZBTB12Q9Y330 459 aaPredicted RBP25.04■■□□□ 1.6
HERC6-205ENST00000504905 IFIT1P09914 478 aaKnown RBP25.03■■□□□ 1.6
HERC6-205ENST00000504905 RPS12P25398 132 aaKnown RBP25.03■■□□□ 1.6
HERC6-205ENST00000504905 EPS15P42566 896 aa25.03■■□□□ 1.6
HERC6-205ENST00000504905 G3BP1Q13283 466 aaKnown RBP eCLIP25.03■■□□□ 1.6
HERC6-205ENST00000504905 USP50Q70EL3 339 aaPredicted RBP25.03■■□□□ 1.6
HERC6-205ENST00000504905 THSD7BQ9C0I4 1608 aa25.02■■□□□ 1.6
HERC6-205ENST00000504905 SLC5A1P13866 664 aa25.02■■□□□ 1.6
HERC6-205ENST00000504905 FGFR2P21802 821 aa25.02■■□□□ 1.6
HERC6-205ENST00000504905 HIBADHP31937 336 aaKnown RBP25.02■■□□□ 1.6
HERC6-205ENST00000504905 GYG1P46976 350 aa25.02■■□□□ 1.6
HERC6-205ENST00000504905 VPS37DQ86XT2 251 aa25.02■■□□□ 1.6
HERC6-205ENST00000504905 LPIN2Q92539 896 aa25.02■■□□□ 1.6
HERC6-205ENST00000504905 ZNF646O15015 1829 aaPredicted RBP25.02■■□□□ 1.6
HERC6-205ENST00000504905 IL1R1P14778 569 aa25.01■■□□□ 1.59
HERC6-205ENST00000504905 CAVIN4Q5BKX8 364 aa25.01■■□□□ 1.59
HERC6-205ENST00000504905 STRIP1Q5VSL9 837 aa25.01■■□□□ 1.59
HERC6-205ENST00000504905 RSBN1LQ6PCB5 846 aaPredicted RBP25.01■■□□□ 1.59
HERC6-205ENST00000504905 DPF2Q92785 391 aa25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms