RNA–Protein interactions for RNA: ENST00000504835.1

CDH6-202, Transcript of cadherin 6, humanhuman

TSL 5

Gene CDH6, Length 1,568 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6-202ENST00000504835 PPIP5K2O43314 1243 aa11.19□□□□□ -0.62
CDH6-202ENST00000504835 EIF2S2P20042 333 aaKnown RBP11.19□□□□□ -0.62
CDH6-202ENST00000504835 LMOD1P29536 600 aaPredicted RBP11.19□□□□□ -0.62
CDH6-202ENST00000504835 PARP10Q53GL7 1025 aa11.19□□□□□ -0.62
CDH6-202ENST00000504835 PPP1R42Q7Z4L9 355 aa11.19□□□□□ -0.62
CDH6-202ENST00000504835 NIM1KQ8IY84 436 aa11.19□□□□□ -0.62
CDH6-202ENST00000504835 NLRP3Q96P20 1036 aa11.19□□□□□ -0.62
CDH6-202ENST00000504835 RTFDC1Q9BY42 306 aaPredicted RBP11.19□□□□□ -0.62
CDH6-202ENST00000504835 TSR3Q9UJK0 312 aaKnown RBP11.19□□□□□ -0.62
CDH6-202ENST00000504835 ABT1Q9ULW3 272 aaKnown RBP11.19□□□□□ -0.62
CDH6-202ENST00000504835 MAPK8IP3Q9UPT6 1336 aa11.19□□□□□ -0.62
CDH6-202ENST00000504835 PSME4Q14997 1843 aa11.18□□□□□ -0.62
CDH6-202ENST00000504835 CXCL9Q07325 125 aa11.18□□□□□ -0.62
CDH6-202ENST00000504835 CYP4F22Q6NT55 531 aa11.18□□□□□ -0.62
CDH6-202ENST00000504835 USP50Q70EL3 339 aaPredicted RBP11.18□□□□□ -0.62
CDH6-202ENST00000504835 LRCH3Q96II8 777 aa11.18□□□□□ -0.62
CDH6-202ENST00000504835 EPAS1Q99814 870 aa11.18□□□□□ -0.62
CDH6-202ENST00000504835 UTP14AQ9BVJ6 771 aaKnown RBP11.18□□□□□ -0.62
CDH6-202ENST00000504835 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.18□□□□□ -0.62
CDH6-202ENST00000504835 GPRC5DQ9NZD1 345 aa11.18□□□□□ -0.62
CDH6-202ENST00000504835 SEPT9Q9UHD8 586 aaPredicted RBP11.18□□□□□ -0.62
CDH6-202ENST00000504835 RIPK4P57078 832 aa11.17□□□□□ -0.62
CDH6-202ENST00000504835 KRT24Q2M2I5 525 aa11.17□□□□□ -0.62
CDH6-202ENST00000504835 NLRP10Q86W26 655 aa11.17□□□□□ -0.62
CDH6-202ENST00000504835 NECTIN2Q92692 538 aa11.17□□□□□ -0.62
CDH6-202ENST00000504835 CAPNS2Q96L46 248 aa11.17□□□□□ -0.62
CDH6-202ENST00000504835 HCLS1P14317 486 aaPredicted RBP11.16□□□□□ -0.62
CDH6-202ENST00000504835 TMPOP42166 694 aaKnown RBP11.16□□□□□ -0.62
CDH6-202ENST00000504835 COPS6Q7L5N1 327 aa11.16□□□□□ -0.62
CDH6-202ENST00000504835 XAGE3Q8WTP9 111 aa11.16□□□□□ -0.62
CDH6-202ENST00000504835 VPS33BQ9H267 617 aa11.16□□□□□ -0.62
CDH6-202ENST00000504835 ADARB2Q9NS39 739 aaKnown RBP11.16□□□□□ -0.62
CDH6-202ENST00000504835 ZNRF3Q9ULT6 936 aa11.16□□□□□ -0.62
CDH6-202ENST00000504835 TLL2Q9Y6L7 1015 aa11.16□□□□□ -0.62
CDH6-202ENST00000504835 SHTN1A0MZ66 631 aa11.16□□□□□ -0.62
CDH6-202ENST00000504835 YDJCA8MPS7 323 aa11.16□□□□□ -0.62
CDH6-202ENST00000504835 TRIM6-TRIM34B2RNG4 842 aa11.16□□□□□ -0.62
CDH6-202ENST00000504835 GMPSP49915 693 aaPredicted RBP11.16□□□□□ -0.62
CDH6-202ENST00000504835 HIRAP54198 1017 aaPredicted RBP11.16□□□□□ -0.62
CDH6-202ENST00000504835 MAP2K1Q02750 393 aaPredicted RBP11.16□□□□□ -0.62
CDH6-202ENST00000504835 AIMP1Q12904 312 aaKnown RBP11.16□□□□□ -0.62
CDH6-202ENST00000504835 C6orf132Q5T0Z8 1188 aa11.16□□□□□ -0.62
CDH6-202ENST00000504835 SP8Q8IXZ3 490 aa11.16□□□□□ -0.62
CDH6-202ENST00000504835 ZNF428Q96B54 188 aa11.16□□□□□ -0.62
CDH6-202ENST00000504835 BABAM1Q9NWV8 329 aa11.16□□□□□ -0.62
CDH6-202ENST00000504835 HPS5Q9UPZ3 1129 aa11.16□□□□□ -0.62
CDH6-202ENST00000504835 TNRC18O15417 2968 aaPredicted RBP11.15□□□□□ -0.62
CDH6-202ENST00000504835 ZNF646O15015 1829 aaPredicted RBP11.15□□□□□ -0.62
CDH6-202ENST00000504835 GTPBP6O43824 516 aaPredicted RBP11.15□□□□□ -0.62
CDH6-202ENST00000504835 AOC2O75106 756 aa11.15□□□□□ -0.62
CDH6-202ENST00000504835 KIAA2012Q0VF49 1180 aa11.15□□□□□ -0.62
CDH6-202ENST00000504835 TCIRG1Q13488 830 aa11.15□□□□□ -0.62
CDH6-202ENST00000504835 ABHD8Q96I13 439 aa11.15□□□□□ -0.62
CDH6-202ENST00000504835 GLIS2Q9BZE0 524 aaPredicted RBP11.15□□□□□ -0.62
CDH6-202ENST00000504835 SPEF2Q9C093 1822 aa11.15□□□□□ -0.62
CDH6-202ENST00000504835 PNNQ9H307 717 aaKnown RBP11.15□□□□□ -0.62
CDH6-202ENST00000504835 PGAP2Q9UHJ9 254 aa11.15□□□□□ -0.62
CDH6-202ENST00000504835 AKAP11Q9UKA4 1901 aa11.14□□□□□ -0.63
CDH6-202ENST00000504835 TULP1O00294 542 aaPredicted RBP11.14□□□□□ -0.63
CDH6-202ENST00000504835 BBOX1O75936 387 aa11.14□□□□□ -0.63
CDH6-202ENST00000504835 RAD17O75943 681 aa11.14□□□□□ -0.63
CDH6-202ENST00000504835 GRAPQ13588 217 aa11.14□□□□□ -0.63
CDH6-202ENST00000504835 CIAPIN1Q6FI81 312 aa11.14□□□□□ -0.63
CDH6-202ENST00000504835 DPP8Q6V1X1 898 aaPredicted RBP11.14□□□□□ -0.63
CDH6-202ENST00000504835 MPNDQ8N594 471 aa11.14□□□□□ -0.63
CDH6-202ENST00000504835 SUPT20HQ8NEM7 779 aa11.14□□□□□ -0.63
CDH6-202ENST00000504835 GRAPLQ8TC17 118 aaPredicted RBP11.14□□□□□ -0.63
CDH6-202ENST00000504835 TRPM4Q8TD43 1214 aa11.14□□□□□ -0.63
CDH6-202ENST00000504835 GPR101Q96P66 508 aaPredicted RBP11.14□□□□□ -0.63
CDH6-202ENST00000504835 SH3TC1Q8TE82 1336 aa11.13□□□□□ -0.63
CDH6-202ENST00000504835 MYH3P11055 1940 aa11.13□□□□□ -0.63
CDH6-202ENST00000504835 CHL1O00533 1208 aa11.13□□□□□ -0.63
CDH6-202ENST00000504835 GFRA3O60609 400 aa11.13□□□□□ -0.63
CDH6-202ENST00000504835 ECE1P42892 770 aa11.13□□□□□ -0.63
CDH6-202ENST00000504835 GRM1Q13255 1194 aa11.13□□□□□ -0.63
CDH6-202ENST00000504835 HSP90AB3PQ58FF7 597 aa11.13□□□□□ -0.63
CDH6-202ENST00000504835 TRAF7Q6Q0C0 670 aa11.13□□□□□ -0.63
CDH6-202ENST00000504835 PAXIP1Q6ZW49 1069 aaPredicted RBP11.13□□□□□ -0.63
CDH6-202ENST00000504835 SAPCD2Q86UD0 394 aa11.13□□□□□ -0.63
CDH6-202ENST00000504835 TRMT112Q9UI30 125 aaKnown RBP11.13□□□□□ -0.63
CDH6-202ENST00000504835 TSKSQ9UJT2 592 aa11.13□□□□□ -0.63
CDH6-202ENST00000504835 CDHR2Q9BYE9 1310 aa11.12□□□□□ -0.63
CDH6-202ENST00000504835 CELF2O95319 508 aaKnown RBP11.12□□□□□ -0.63
CDH6-202ENST00000504835 DLK2Q6UY11 383 aa11.12□□□□□ -0.63
CDH6-202ENST00000504835 CCDC146Q8IYE0 955 aa11.12□□□□□ -0.63
CDH6-202ENST00000504835 CHPF2Q9P2E5 772 aa11.12□□□□□ -0.63
CDH6-202ENST00000504835 DDX46Q7L014 1031 aaKnown RBP11.11□□□□□ -0.63
CDH6-202ENST00000504835 CELF1Q92879 486 aaKnown RBP11.11□□□□□ -0.63
CDH6-202ENST00000504835 ISCA1Q9BUE6 129 aa11.11□□□□□ -0.63
CDH6-202ENST00000504835 TMX4Q9H1E5 349 aaPredicted RBP11.11□□□□□ -0.63
CDH6-202ENST00000504835 EGFRP00533 1210 aa11.11□□□□□ -0.63
CDH6-202ENST00000504835 LMOD3Q0VAK6 560 aa11.11□□□□□ -0.63
CDH6-202ENST00000504835 RALBP1Q15311 655 aa11.11□□□□□ -0.63
CDH6-202ENST00000504835 NEUROD2Q15784 382 aa11.11□□□□□ -0.63
CDH6-202ENST00000504835 CNOT7Q9UIV1 285 aaKnown RBP11.11□□□□□ -0.63
CDH6-202ENST00000504835 MAP2K2P36507 400 aa11.1□□□□□ -0.63
CDH6-202ENST00000504835 TNIP1Q15025 636 aa11.1□□□□□ -0.63
CDH6-202ENST00000504835 SF3B3Q15393 1217 aaKnown RBP11.1□□□□□ -0.63
CDH6-202ENST00000504835 PLBD2Q8NHP8 589 aa11.1□□□□□ -0.63
CDH6-202ENST00000504835 ZC3H15Q8WU90 426 aaKnown RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms