RNA–Protein interactions for RNA: ENST00000504687.5

LMNA-220, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-220ENST00000504687 RNF113AO15541 343 aaKnown RBP16■□□□□ 0.15
LMNA-220ENST00000504687 TAF5LO75529 589 aa16■□□□□ 0.15
LMNA-220ENST00000504687 PRR5LQ6MZQ0 368 aa16■□□□□ 0.15
LMNA-220ENST00000504687 DDX46Q7L014 1031 aaKnown RBP16■□□□□ 0.15
LMNA-220ENST00000504687 NLGN1Q8N2Q7 840 aa16■□□□□ 0.15
LMNA-220ENST00000504687 EDC3Q96F86 508 aaKnown RBP16■□□□□ 0.15
LMNA-220ENST00000504687 ANKRD2Q9GZV1 360 aa16■□□□□ 0.15
LMNA-220ENST00000504687 ANTXR1Q9H6X2 564 aa16■□□□□ 0.15
LMNA-220ENST00000504687 IGSF3O75054 1194 aa15.99■□□□□ 0.15
LMNA-220ENST00000504687 MCAMP43121 646 aa15.99■□□□□ 0.15
LMNA-220ENST00000504687 SLC4A3P48751 1232 aa15.99■□□□□ 0.15
LMNA-220ENST00000504687 ZSCAN25Q6NSZ9 544 aa15.99■□□□□ 0.15
LMNA-220ENST00000504687 HMG20BQ9P0W2 317 aa15.99■□□□□ 0.15
LMNA-220ENST00000504687 PALD1Q9ULE6 856 aa15.99■□□□□ 0.15
LMNA-220ENST00000504687 MINPP1Q9UNW1 487 aa15.99■□□□□ 0.15
LMNA-220ENST00000504687 LRRC37AA6NMS7 1700 aa15.99■□□□□ 0.15
LMNA-220ENST00000504687 PDS5AQ29RF7 1337 aaKnown RBP15.98■□□□□ 0.15
LMNA-220ENST00000504687 POLRMTO00411 1230 aaKnown RBP15.98■□□□□ 0.15
LMNA-220ENST00000504687 SERPINB2P05120 415 aa15.98■□□□□ 0.15
LMNA-220ENST00000504687 HOXA10P31260 410 aaPredicted RBP15.98■□□□□ 0.15
LMNA-220ENST00000504687 BAG6P46379 1132 aa15.98■□□□□ 0.15
LMNA-220ENST00000504687 ST5P78524 1137 aa15.98■□□□□ 0.15
LMNA-220ENST00000504687 PTH1RQ03431 593 aa15.98■□□□□ 0.15
LMNA-220ENST00000504687 SCARF1Q14162 830 aa15.98■□□□□ 0.15
LMNA-220ENST00000504687 EZH2Q15910 746 aaKnown RBP15.98■□□□□ 0.15
LMNA-220ENST00000504687 ZNF827Q17R98 1081 aa15.98■□□□□ 0.15
LMNA-220ENST00000504687 CELF1Q92879 486 aaKnown RBP15.98■□□□□ 0.15
LMNA-220ENST00000504687 CAMKK2Q96RR4 588 aa15.98■□□□□ 0.15
LMNA-220ENST00000504687 DSCC1Q9BVC3 393 aa15.98■□□□□ 0.15
LMNA-220ENST00000504687 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.98■□□□□ 0.153e-9■□□□□ 8.1
LMNA-220ENST00000504687 SNX14Q9Y5W7 946 aa15.98■□□□□ 0.15
LMNA-220ENST00000504687 ANKRD31Q8N7Z5 1873 aa15.97■□□□□ 0.15
LMNA-220ENST00000504687 SEMA3EO15041 775 aa15.97■□□□□ 0.15
LMNA-220ENST00000504687 DDIT3P35638 169 aa15.97■□□□□ 0.15
LMNA-220ENST00000504687 ZAP70P43403 619 aa15.97■□□□□ 0.15
LMNA-220ENST00000504687 PHKA1P46020 1223 aa15.97■□□□□ 0.15
LMNA-220ENST00000504687 GRAPQ13588 217 aa15.97■□□□□ 0.15
LMNA-220ENST00000504687 RNF20Q5VTR2 975 aa15.97■□□□□ 0.15
LMNA-220ENST00000504687 TMED8Q6PL24 325 aaPredicted RBP15.97■□□□□ 0.15
LMNA-220ENST00000504687 GRAPLQ8TC17 118 aaPredicted RBP15.97■□□□□ 0.15
LMNA-220ENST00000504687 CIZ1Q9ULV3 898 aaPredicted RBP15.97■□□□□ 0.15
LMNA-220ENST00000504687 RBM8AQ9Y5S9 174 aaKnown RBP15.97■□□□□ 0.15
LMNA-220ENST00000504687 U3KPZ7 1027 aaPredicted RBP15.97■□□□□ 0.15
LMNA-220ENST00000504687 CD2BP2O95400 341 aaKnown RBP15.96■□□□□ 0.15
LMNA-220ENST00000504687 FKBP4Q02790 459 aaKnown RBP eCLIP15.96■□□□□ 0.15
LMNA-220ENST00000504687 UBE3CQ15386 1083 aa15.96■□□□□ 0.15
LMNA-220ENST00000504687 TMC4Q7Z404 712 aa15.96■□□□□ 0.15
LMNA-220ENST00000504687 ZNF589Q86UQ0 364 aaPredicted RBP15.96■□□□□ 0.15
LMNA-220ENST00000504687 HELBQ8NG08 1087 aaPredicted RBP15.96■□□□□ 0.15
LMNA-220ENST00000504687 APPBP2Q92624 585 aa15.96■□□□□ 0.15
LMNA-220ENST00000504687 TFCP2L1Q9NZI6 479 aa15.96■□□□□ 0.15
LMNA-220ENST00000504687 RPAP1Q9BWH6 1393 aaPredicted RBP15.96■□□□□ 0.15
LMNA-220ENST00000504687 CYP2E1P05181 493 aaPredicted RBP15.95■□□□□ 0.14
LMNA-220ENST00000504687 ZKSCAN1P17029 563 aaPredicted RBP15.95■□□□□ 0.14
LMNA-220ENST00000504687 DDR1Q08345 913 aa15.95■□□□□ 0.14
LMNA-220ENST00000504687 C15orf52Q6ZUT6 534 aaKnown RBP15.95■□□□□ 0.14
LMNA-220ENST00000504687 COL23A1Q86Y22 540 aaPredicted RBP15.95■□□□□ 0.14
LMNA-220ENST00000504687 SPATA5Q8NB90 893 aa15.95■□□□□ 0.14
LMNA-220ENST00000504687 CRAMP1Q96RY5 1269 aa15.95■□□□□ 0.14
LMNA-220ENST00000504687 ALDH8A1Q9H2A2 487 aaPredicted RBP15.95■□□□□ 0.14
LMNA-220ENST00000504687 NDUFB9Q9Y6M9 179 aa15.95■□□□□ 0.14
LMNA-220ENST00000504687 MYO5AQ9Y4I1 1855 aaKnown RBP15.95■□□□□ 0.14
LMNA-220ENST00000504687 MYH13Q9UKX3 1938 aa15.94■□□□□ 0.14
LMNA-220ENST00000504687 ADD2P35612 726 aa15.94■□□□□ 0.14
LMNA-220ENST00000504687 NEK4P51957 841 aa15.94■□□□□ 0.14
LMNA-220ENST00000504687 KRT32Q14532 448 aa15.94■□□□□ 0.14
LMNA-220ENST00000504687 CREB3L3Q68CJ9 461 aa15.94■□□□□ 0.14
LMNA-220ENST00000504687 FBXO33Q7Z6M2 555 aa15.94■□□□□ 0.14
LMNA-220ENST00000504687 RASEFQ8IZ41 740 aa15.94■□□□□ 0.14
LMNA-220ENST00000504687 TTC14Q96N46 770 aa15.94■□□□□ 0.14
LMNA-220ENST00000504687 ZSWIM6Q9HCJ5 1215 aa15.94■□□□□ 0.14
LMNA-220ENST00000504687 GNL3LQ9NVN8 582 aaKnown RBP15.94■□□□□ 0.14
LMNA-220ENST00000504687 LEMD3Q9Y2U8 911 aa15.94■□□□□ 0.14
LMNA-220ENST00000504687 LTBP1Q14766 1721 aa15.94■□□□□ 0.14
LMNA-220ENST00000504687 KIAA1551Q9HCM1 1747 aa15.94■□□□□ 0.14
LMNA-220ENST00000504687 MAST3O60307 1309 aa15.94■□□□□ 0.14
LMNA-220ENST00000504687 PNPLA7Q6ZV29 1317 aa15.94■□□□□ 0.14
LMNA-220ENST00000504687 IRS2Q9Y4H2 1338 aa15.94■□□□□ 0.14
LMNA-220ENST00000504687 DUOX1Q9NRD9 1551 aa15.93■□□□□ 0.14
LMNA-220ENST00000504687 SLC27A2O14975 620 aa15.93■□□□□ 0.14
LMNA-220ENST00000504687 BBOX1O75936 387 aa15.93■□□□□ 0.14
LMNA-220ENST00000504687 PSMA5P28066 241 aa15.93■□□□□ 0.14
LMNA-220ENST00000504687 RASGRF1Q13972 1273 aa15.93■□□□□ 0.14
LMNA-220ENST00000504687 BRIP1Q9BX63 1249 aa15.93■□□□□ 0.14
LMNA-220ENST00000504687 NPHP1O15259 732 aa15.92■□□□□ 0.14
LMNA-220ENST00000504687 CUL4AQ13619 759 aa15.92■□□□□ 0.14
LMNA-220ENST00000504687 CAVIN4Q5BKX8 364 aa15.92■□□□□ 0.14
LMNA-220ENST00000504687 VPS53Q5VIR6 699 aa15.92■□□□□ 0.14
LMNA-220ENST00000504687 RBM17Q96I25 401 aaKnown RBP15.92■□□□□ 0.14
LMNA-220ENST00000504687 CHMP5Q9NZZ3 219 aa15.92■□□□□ 0.14
LMNA-220ENST00000504687 MAST2Q6P0Q8 1798 aa15.91■□□□□ 0.14
LMNA-220ENST00000504687 TCRBV5S4A2TA0A5A2 114 aa15.91■□□□□ 0.14
LMNA-220ENST00000504687 PRPF40BQ6NWY9 871 aaKnown RBP15.91■□□□□ 0.14
LMNA-220ENST00000504687 RPGRQ92834 1020 aaKnown RBP15.91■□□□□ 0.14
LMNA-220ENST00000504687 OSBP2Q969R2 916 aa15.91■□□□□ 0.14
LMNA-220ENST00000504687 INTS4Q96HW7 963 aaKnown RBP15.91■□□□□ 0.14
LMNA-220ENST00000504687 FAM84BQ96KN1 310 aaPredicted RBP15.91■□□□□ 0.14
LMNA-220ENST00000504687 SEC62Q99442 399 aaKnown RBP15.91■□□□□ 0.14
LMNA-220ENST00000504687 CWC22Q9HCG8 908 aaKnown RBP15.91■□□□□ 0.14
LMNA-220ENST00000504687 PIH1D3Q9NQM4 214 aaKnown RBP15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms